RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 TMEM259Q4ZIN3 620 aa14.08□□□□□ -0.16
HDAC7-228ENST00000548938 FSCBQ5H9T9 825 aa14.08□□□□□ -0.16
HDAC7-228ENST00000548938 RARS2Q5T160 578 aaKnown RBP14.08□□□□□ -0.16
HDAC7-228ENST00000548938 BSPRYQ5W0U4 402 aa14.08□□□□□ -0.16
HDAC7-228ENST00000548938 MAP1SQ66K74 1059 aaPredicted RBP14.08□□□□□ -0.16
HDAC7-228ENST00000548938 IYDQ6PHW0 289 aa14.08□□□□□ -0.16
HDAC7-228ENST00000548938 KCNT2Q6UVM3 1135 aa14.08□□□□□ -0.16
HDAC7-228ENST00000548938 LRRC71Q8N4P6 559 aa14.08□□□□□ -0.16
HDAC7-228ENST00000548938 PGLYRP2Q96PD5 576 aa14.08□□□□□ -0.16
HDAC7-228ENST00000548938 PRPF18Q99633 342 aaKnown RBP14.08□□□□□ -0.16
HDAC7-228ENST00000548938 Q9H521 79 aa14.08□□□□□ -0.16
HDAC7-228ENST00000548938 ADARB2Q9NS39 739 aaKnown RBP14.08□□□□□ -0.16
HDAC7-228ENST00000548938 DNAAF2Q9NVR5 837 aaKnown RBP14.08□□□□□ -0.16
HDAC7-228ENST00000548938 MTMR10Q9NXD2 777 aa14.08□□□□□ -0.16
HDAC7-228ENST00000548938 CPA3P15088 417 aa14.07□□□□□ -0.16
HDAC7-228ENST00000548938 XRCC1P18887 633 aaPredicted RBP14.07□□□□□ -0.16
HDAC7-228ENST00000548938 MGAT1P26572 445 aa14.07□□□□□ -0.16
HDAC7-228ENST00000548938 PCSK6P29122 969 aa14.07□□□□□ -0.16
HDAC7-228ENST00000548938 LAMTOR4Q0VGL1 99 aa14.07□□□□□ -0.16
HDAC7-228ENST00000548938 ADGRE1Q14246 886 aa14.07□□□□□ -0.16
HDAC7-228ENST00000548938 NOL9Q5SY16 702 aaKnown RBP14.07□□□□□ -0.16
HDAC7-228ENST00000548938 C6orf52Q5T4I8 152 aa14.07□□□□□ -0.16
HDAC7-228ENST00000548938 EPGNQ6UW88 154 aa14.07□□□□□ -0.16
HDAC7-228ENST00000548938 MPZL3Q6UWV2 235 aa14.07□□□□□ -0.16
HDAC7-228ENST00000548938 NAPRTQ6XQN6 538 aa14.07□□□□□ -0.16
HDAC7-228ENST00000548938 CDKL2Q92772 493 aa14.07□□□□□ -0.16
HDAC7-228ENST00000548938 LRGUKQ96M69 825 aa14.07□□□□□ -0.16
HDAC7-228ENST00000548938 ZNF670Q9BS34 389 aa14.07□□□□□ -0.16
HDAC7-228ENST00000548938 MRPS26Q9BYN8 205 aaKnown RBP14.07□□□□□ -0.16
HDAC7-228ENST00000548938 GCOM2Q9BZD3 368 aaPredicted RBP14.07□□□□□ -0.16
HDAC7-228ENST00000548938 SENP6Q9GZR1 1112 aaPredicted RBP14.07□□□□□ -0.16
HDAC7-228ENST00000548938 CDH19Q9H159 772 aa14.07□□□□□ -0.16
HDAC7-228ENST00000548938 COPS7BQ9H9Q2 264 aaPredicted RBP14.07□□□□□ -0.16
HDAC7-228ENST00000548938 RHBDL2Q9NX52 303 aa14.07□□□□□ -0.16
HDAC7-228ENST00000548938 RIMS3Q9UJD0 308 aa14.07□□□□□ -0.16
HDAC7-228ENST00000548938 AFG3L2Q9Y4W6 797 aa14.07□□□□□ -0.16
HDAC7-228ENST00000548938 PCDHB12Q9Y5F1 795 aa14.07□□□□□ -0.16
HDAC7-228ENST00000548938 GOLGA8QA0A0J9YX86 632 aa14.07□□□□□ -0.16
HDAC7-228ENST00000548938 GOLGA8OA6NCC3 632 aa14.07□□□□□ -0.16
HDAC7-228ENST00000548938 GOLGA8NF8WBI6 632 aa14.07□□□□□ -0.16
HDAC7-228ENST00000548938 MAFO75444 373 aaPredicted RBP14.07□□□□□ -0.16
HDAC7-228ENST00000548938 TFE3P19532 575 aaPredicted RBP14.07□□□□□ -0.16
HDAC7-228ENST00000548938 TYK2P29597 1187 aa14.07□□□□□ -0.16
HDAC7-228ENST00000548938 ATXN3P54252 364 aaPredicted RBP14.07□□□□□ -0.16
HDAC7-228ENST00000548938 CES3Q6UWW8 571 aa14.07□□□□□ -0.16
HDAC7-228ENST00000548938 CYS1Q717R9 158 aa14.07□□□□□ -0.16
HDAC7-228ENST00000548938 SNX32Q86XE0 403 aa14.07□□□□□ -0.16
HDAC7-228ENST00000548938 LILRA2Q8N149 483 aa14.07□□□□□ -0.16
HDAC7-228ENST00000548938 ATXN7L3BQ96GX2 97 aa14.07□□□□□ -0.16
HDAC7-228ENST00000548938 RAB26Q9ULW5 256 aa14.07□□□□□ -0.16
HDAC7-228ENST00000548938 MFHAS1Q9Y4C4 1052 aa14.07□□□□□ -0.16
HDAC7-228ENST00000548938 IGKV6D-21A0A0A0MT36 114 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 TNFAIP8O95379 198 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 HSPA4LO95757 839 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 CDKL1Q00532 357 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 FLOT2Q14254 428 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 TMEM132BQ14DG7 1078 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 TMEM132AQ24JP5 1023 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 C4orf22Q6V702 233 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 ZBTB8OSQ8IWT0 167 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 AHI1Q8N157 1196 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 PLD6Q8N2A8 252 aaKnown RBP14.06□□□□□ -0.16
HDAC7-228ENST00000548938 RNF148Q8N7C7 305 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 ZFRQ96KR1 1074 aaKnown RBP14.06□□□□□ -0.16
HDAC7-228ENST00000548938 PPP1R36Q96LQ0 422 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 QKIQ96PU8 341 aaKnown RBP eCLIP14.06□□□□□ -0.16
HDAC7-228ENST00000548938 ZNF696Q9H7X3 374 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 CHCHD3Q9NX63 227 aaKnown RBP14.06□□□□□ -0.16
HDAC7-228ENST00000548938 TSPAN16Q9UKR8 245 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 ADAMTS5Q9UNA0 930 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 DMTF1Q9Y222 760 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 PCNTO95613 3336 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 A0A1B0GTW7 788 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 ADM5C9JUS6 153 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 GJB1P08034 283 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 ERVK-10P10266 1014 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 VDRP11473 427 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 CDK4P11802 303 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 MX2P20592 715 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 PIK3R1P27986 724 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 SDC4P31431 198 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 ATXN1P54253 815 aaKnown RBP14.06□□□□□ -0.16
HDAC7-228ENST00000548938 PKNOX1P55347 436 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 HDAC4P56524 1084 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 VGLL4Q14135 290 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 SH2D4BQ5SQS7 431 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 ATF7IP2Q5U623 682 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 C9orf131Q5VYM1 1079 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 HEATR6Q6AI08 1181 aaKnown RBP14.06□□□□□ -0.16
HDAC7-228ENST00000548938 TICAM1Q8IUC6 712 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 NETO2Q8NC67 525 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 ARNTL2Q8WYA1 636 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 MRPL1Q9BYD6 325 aaKnown RBP14.06□□□□□ -0.16
HDAC7-228ENST00000548938 GBA2Q9HCG7 927 aaPredicted RBP14.06□□□□□ -0.16
HDAC7-228ENST00000548938 ACSS2Q9NR19 701 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 SNX15Q9NRS6 342 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 GNEQ9Y223 722 aaKnown RBP14.06□□□□□ -0.16
HDAC7-228ENST00000548938 CDY2AQ9Y6F7 541 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 CDY1Q9Y6F8 540 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 ANK1P16157 1881 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms