RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 ATP2A3Q93084 1043 aa4.53□□□□□ -1.68
CCDC38-206ENST00000548771 URB1-AS1Q96HZ7 61 aa4.53□□□□□ -1.68
CCDC38-206ENST00000548771 FAM84BQ96KN1 310 aaPredicted RBP4.53□□□□□ -1.68
CCDC38-206ENST00000548771 EIF3CQ99613 913 aaKnown RBP4.53□□□□□ -1.68
CCDC38-206ENST00000548771 NTPCRQ9BSD7 190 aaKnown RBP4.53□□□□□ -1.68
CCDC38-206ENST00000548771 HTATIP2Q9BUP3 242 aa4.53□□□□□ -1.68
CCDC38-206ENST00000548771 HELLSQ9NRZ9 838 aa4.53□□□□□ -1.68
CCDC38-206ENST00000548771 PNMA6EA0A0J9YXQ4 647 aa4.52□□□□□ -1.69
CCDC38-206ENST00000548771 M0QYT0 321 aa4.52□□□□□ -1.69
CCDC38-206ENST00000548771 RHODO00212 210 aa4.52□□□□□ -1.69
CCDC38-206ENST00000548771 PMM2O15305 246 aa4.52□□□□□ -1.69
CCDC38-206ENST00000548771 GLP2RO95838 553 aa4.52□□□□□ -1.69
CCDC38-206ENST00000548771 ANXA6P08133 673 aa4.52□□□□□ -1.69
CCDC38-206ENST00000548771 TNFSF4P23510 183 aa4.52□□□□□ -1.69
CCDC38-206ENST00000548771 EEF1GP26641 437 aaKnown RBP4.52□□□□□ -1.69
CCDC38-206ENST00000548771 HOXA11P31270 313 aaPredicted RBP4.52□□□□□ -1.69
CCDC38-206ENST00000548771 RASSF2P50749 326 aa4.52□□□□□ -1.69
CCDC38-206ENST00000548771 SHC2P98077 582 aa4.52□□□□□ -1.69
CCDC38-206ENST00000548771 CBFBQ13951 182 aa4.52□□□□□ -1.69
CCDC38-206ENST00000548771 GRM4Q14833 912 aa4.52□□□□□ -1.69
CCDC38-206ENST00000548771 TTC39AQ5SRH9 613 aa4.52□□□□□ -1.69
CCDC38-206ENST00000548771 WDR93Q6P2C0 686 aa4.52□□□□□ -1.69
CCDC38-206ENST00000548771 LRIG3Q6UXM1 1119 aa4.52□□□□□ -1.69
CCDC38-206ENST00000548771 KRT27Q7Z3Y8 459 aa4.52□□□□□ -1.69
CCDC38-206ENST00000548771 DCP1BQ8IZD4 617 aaKnown RBP4.52□□□□□ -1.69
CCDC38-206ENST00000548771 LPAR1Q92633 364 aa4.52□□□□□ -1.69
CCDC38-206ENST00000548771 CENPIQ92674 756 aaPredicted RBP4.52□□□□□ -1.69
CCDC38-206ENST00000548771 FAR2Q96K12 515 aa4.52□□□□□ -1.69
CCDC38-206ENST00000548771 MEIS3Q99687 375 aa4.52□□□□□ -1.69
CCDC38-206ENST00000548771 ABHD14AQ9BUJ0 271 aa4.52□□□□□ -1.69
CCDC38-206ENST00000548771 RBM38Q9H0Z9 239 aaKnown RBP4.52□□□□□ -1.69
CCDC38-206ENST00000548771 TASP1Q9H6P5 420 aa4.52□□□□□ -1.69
CCDC38-206ENST00000548771 SFXN1Q9H9B4 322 aa4.52□□□□□ -1.69
CCDC38-206ENST00000548771 TM7SF3Q9NS93 570 aa4.52□□□□□ -1.69
CCDC38-206ENST00000548771 SIRT3Q9NTG7 399 aaPredicted RBP4.52□□□□□ -1.69
CCDC38-206ENST00000548771 SLC52A1Q9NWF4 448 aa4.52□□□□□ -1.69
CCDC38-206ENST00000548771 PROCRQ9UNN8 238 aa4.52□□□□□ -1.69
CCDC38-206ENST00000548771 FAM50BQ9Y247 325 aa4.52□□□□□ -1.69
CCDC38-206ENST00000548771 SCN5AQ14524 2016 aa4.51□□□□□ -1.69
CCDC38-206ENST00000548771 CYP3A7-CYP3A51PA0A087WV96 503 aa4.51□□□□□ -1.69
CCDC38-206ENST00000548771 DPPA5A6NC42 116 aa4.51□□□□□ -1.69
CCDC38-206ENST00000548771 GAGE12JA6NER3 117 aa4.51□□□□□ -1.69
CCDC38-206ENST00000548771 H0YGN5 161 aa4.51□□□□□ -1.69
CCDC38-206ENST00000548771 KLKB1P03952 638 aa4.51□□□□□ -1.69
CCDC38-206ENST00000548771 CYP3A4P08684 503 aa4.51□□□□□ -1.69
CCDC38-206ENST00000548771 CYP3A7P24462 503 aa4.51□□□□□ -1.69
CCDC38-206ENST00000548771 TLE3Q04726 772 aa4.51□□□□□ -1.69
CCDC38-206ENST00000548771 RAB30Q15771 203 aa4.51□□□□□ -1.69
CCDC38-206ENST00000548771 P3H1Q32P28 736 aa4.51□□□□□ -1.69
CCDC38-206ENST00000548771 Q5PR19 223 aa4.51□□□□□ -1.69
CCDC38-206ENST00000548771 RTL10Q7L3V2 364 aa4.51□□□□□ -1.69
CCDC38-206ENST00000548771 KDELC2Q7Z4H8 507 aa4.51□□□□□ -1.69
CCDC38-206ENST00000548771 PJA1Q8NG27 643 aa4.51□□□□□ -1.69
CCDC38-206ENST00000548771 METTL14Q9HCE5 456 aaKnown RBP4.51□□□□□ -1.69
CCDC38-206ENST00000548771 KCNJ18B7U540 433 aa4.5□□□□□ -1.69
CCDC38-206ENST00000548771 HNRNPDLO14979 420 aaKnown RBP4.5□□□□□ -1.69
CCDC38-206ENST00000548771 NEURL1O76050 574 aa4.5□□□□□ -1.69
CCDC38-206ENST00000548771 CER1O95813 267 aa4.5□□□□□ -1.69
CCDC38-206ENST00000548771 CDC25AP30304 524 aa4.5□□□□□ -1.69
CCDC38-206ENST00000548771 CIITAP33076 1130 aa4.5□□□□□ -1.69
CCDC38-206ENST00000548771 RPL15P61313 204 aaKnown RBP4.5□□□□□ -1.69
CCDC38-206ENST00000548771 LTBQ06643 244 aa4.5□□□□□ -1.69
CCDC38-206ENST00000548771 MPEG1Q2M385 716 aa4.5□□□□□ -1.69
CCDC38-206ENST00000548771 SLC4A8Q2Y0W8 1093 aa4.5□□□□□ -1.69
CCDC38-206ENST00000548771 WASHC2DQ5SRD0 308 aa4.5□□□□□ -1.69
CCDC38-206ENST00000548771 ARL6IP4Q66PJ3 421 aaKnown RBP4.5□□□□□ -1.69
CCDC38-206ENST00000548771 ZNF324BQ6AW86 544 aaPredicted RBP4.5□□□□□ -1.69
CCDC38-206ENST00000548771 PARM1Q6UWI2 310 aa4.5□□□□□ -1.69
CCDC38-206ENST00000548771 TRILQ7L0X0 811 aa4.5□□□□□ -1.69
CCDC38-206ENST00000548771 MDGA2Q7Z553 956 aa4.5□□□□□ -1.69
CCDC38-206ENST00000548771 TRABD2AQ86V40 505 aa4.5□□□□□ -1.69
CCDC38-206ENST00000548771 SPATA2LQ8IUW3 424 aaPredicted RBP4.5□□□□□ -1.69
CCDC38-206ENST00000548771 FBXL14Q8N1E6 418 aa4.5□□□□□ -1.69
CCDC38-206ENST00000548771 C8orf48Q96LL4 319 aa4.5□□□□□ -1.69
CCDC38-206ENST00000548771 PPP1R10Q96QC0 940 aaKnown RBP4.5□□□□□ -1.69
CCDC38-206ENST00000548771 ZBTB1Q9Y2K1 713 aa4.5□□□□□ -1.69
CCDC38-206ENST00000548771 RPS10-NUDT3A0A1W2PQS6 291 aa4.49□□□□□ -1.69
CCDC38-206ENST00000548771 C3orf70A6NLC5 250 aaPredicted RBP4.49□□□□□ -1.69
CCDC38-206ENST00000548771 RASA4BC9J798 803 aa4.49□□□□□ -1.69
CCDC38-206ENST00000548771 PODXLO00592 558 aa4.49□□□□□ -1.69
CCDC38-206ENST00000548771 RASA4O43374 803 aa4.49□□□□□ -1.69
CCDC38-206ENST00000548771 PLA2G6O60733 806 aa4.49□□□□□ -1.69
CCDC38-206ENST00000548771 PARNO95453 639 aaKnown RBP4.49□□□□□ -1.69
CCDC38-206ENST00000548771 MLH1P40692 756 aa4.49□□□□□ -1.69
CCDC38-206ENST00000548771 ADPRHP54922 357 aa4.49□□□□□ -1.69
CCDC38-206ENST00000548771 GAD2Q05329 585 aa4.49□□□□□ -1.69
CCDC38-206ENST00000548771 Q0VFX4 171 aa4.49□□□□□ -1.69
CCDC38-206ENST00000548771 TMEM88Q6PEY1 159 aa4.49□□□□□ -1.69
CCDC38-206ENST00000548771 C11orf96Q7Z7L8 435 aa4.49□□□□□ -1.69
CCDC38-206ENST00000548771 ZBTB8BQ8NAP8 495 aaPredicted RBP4.49□□□□□ -1.69
CCDC38-206ENST00000548771 KDM1BQ8NB78 822 aa4.49□□□□□ -1.69
CCDC38-206ENST00000548771 ADPRHL1Q8NDY3 354 aa4.49□□□□□ -1.69
CCDC38-206ENST00000548771 NEUROG1Q92886 237 aa4.49□□□□□ -1.69
CCDC38-206ENST00000548771 ZNF566Q969W8 418 aa4.49□□□□□ -1.69
CCDC38-206ENST00000548771 RIPOR3Q96MK2 946 aa4.49□□□□□ -1.69
CCDC38-206ENST00000548771 ISCUQ9H1K1 167 aa4.49□□□□□ -1.69
CCDC38-206ENST00000548771 PLAC1Q9HBJ0 212 aa4.49□□□□□ -1.69
CCDC38-206ENST00000548771 CD93Q9NPY3 652 aa4.49□□□□□ -1.69
CCDC38-206ENST00000548771 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.49□□□□□ -1.69
CCDC38-206ENST00000548771 PLK2Q9NYY3 685 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms