RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 TRIP4Q15650 581 aaPredicted RBP17.97■□□□□ 0.47
HDAC7-227ENST00000548080 BOLA3Q53S33 107 aa17.97■□□□□ 0.47
HDAC7-227ENST00000548080 SCYL2Q6P3W7 929 aa17.97■□□□□ 0.47
HDAC7-227ENST00000548080 CCDC50Q8IVM0 306 aa17.97■□□□□ 0.47
HDAC7-227ENST00000548080 FBXL6Q8N531 539 aa17.97■□□□□ 0.47
HDAC7-227ENST00000548080 NOA1Q8NC60 698 aaKnown RBP17.97■□□□□ 0.47
HDAC7-227ENST00000548080 FAM3CQ92520 227 aa17.97■□□□□ 0.47
HDAC7-227ENST00000548080 RNF25Q96BH1 459 aaPredicted RBP17.97■□□□□ 0.47
HDAC7-227ENST00000548080 PLD4Q96BZ4 506 aa17.97■□□□□ 0.47
HDAC7-227ENST00000548080 P2RY11Q96G91 374 aa17.97■□□□□ 0.47
HDAC7-227ENST00000548080 SHDQ96IW2 340 aa17.97■□□□□ 0.47
HDAC7-227ENST00000548080 PEBP4Q96S96 227 aa17.97■□□□□ 0.47
HDAC7-227ENST00000548080 FAM204AQ9H8W3 233 aa17.97■□□□□ 0.47
HDAC7-227ENST00000548080 LTB4R2Q9NPC1 389 aa17.97■□□□□ 0.47
HDAC7-227ENST00000548080 TBC1D14Q9P2M4 693 aa17.97■□□□□ 0.47
HDAC7-227ENST00000548080 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.97■□□□□ 0.47
HDAC7-227ENST00000548080 HBS1LQ9Y450 684 aaKnown RBP17.97■□□□□ 0.47
HDAC7-227ENST00000548080 V9GYY5 206 aaPredicted RBP17.97■□□□□ 0.47
HDAC7-227ENST00000548080 KMT2EQ8IZD2 1858 aa17.96■□□□□ 0.47
HDAC7-227ENST00000548080 TSPAN3O60637 253 aa17.96■□□□□ 0.47
HDAC7-227ENST00000548080 RARAP10276 462 aa17.96■□□□□ 0.47
HDAC7-227ENST00000548080 NAA30Q147X3 362 aaPredicted RBP17.96■□□□□ 0.47
HDAC7-227ENST00000548080 ERCC6LQ2NKX8 1250 aa17.96■□□□□ 0.47
HDAC7-227ENST00000548080 GAB4Q2WGN9 574 aa17.96■□□□□ 0.47
HDAC7-227ENST00000548080 ANO4Q32M45 955 aa17.96■□□□□ 0.47
HDAC7-227ENST00000548080 OTUD1Q5VV17 481 aaPredicted RBP17.96■□□□□ 0.47
HDAC7-227ENST00000548080 ZNF852Q6ZMS4 543 aa17.96■□□□□ 0.47
HDAC7-227ENST00000548080 BNIPLQ7Z465 357 aa17.96■□□□□ 0.47
HDAC7-227ENST00000548080 C12orf40Q86WS4 652 aa17.96■□□□□ 0.47
HDAC7-227ENST00000548080 NAT16Q8N8M0 369 aa17.96■□□□□ 0.47
HDAC7-227ENST00000548080 TMEM105Q8N8V8 129 aa17.96■□□□□ 0.47
HDAC7-227ENST00000548080 TEKT4Q8WW24 435 aa17.96■□□□□ 0.47
HDAC7-227ENST00000548080 MAIP1Q8WWC4 291 aa17.96■□□□□ 0.47
HDAC7-227ENST00000548080 RAPGEF5Q92565 580 aa17.96■□□□□ 0.47
HDAC7-227ENST00000548080 FCRL2Q96LA5 508 aaPredicted RBP17.96■□□□□ 0.47
HDAC7-227ENST00000548080 AP1M1Q9BXS5 423 aa17.96■□□□□ 0.47
HDAC7-227ENST00000548080 C8orf33Q9H7E9 229 aaPredicted RBP17.96■□□□□ 0.47
HDAC7-227ENST00000548080 FBRSL1Q9HCM7 1045 aaKnown RBP17.96■□□□□ 0.47
HDAC7-227ENST00000548080 KLHL11Q9NVR0 708 aa17.96■□□□□ 0.47
HDAC7-227ENST00000548080 PLK2Q9NYY3 685 aa17.96■□□□□ 0.47
HDAC7-227ENST00000548080 CALCOCO1Q9P1Z2 691 aa17.96■□□□□ 0.47
HDAC7-227ENST00000548080 ATG2BQ96BY7 2078 aa17.96■□□□□ 0.47
HDAC7-227ENST00000548080 GOLGA6L7A0A1B0GV03 622 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 LRRD1A4D1F6 860 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 FAM170BA6NMN3 283 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 CCDC188H7C350 402 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 M0QYT0 321 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 IRAK2O43187 625 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 ADH5P11766 374 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 KDELR1P24390 212 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 SLC6A11P48066 632 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 MESP2Q0VG99 397 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 NME3Q13232 169 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 SMTNL2Q2TAL5 461 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 ZC3H12AQ5D1E8 599 aaKnown RBP17.95■□□□□ 0.46
HDAC7-227ENST00000548080 KCNT1Q5JUK3 1230 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 ASTLQ6HA08 431 aaPredicted RBP17.95■□□□□ 0.46
HDAC7-227ENST00000548080 MFSD7Q6UXD7 560 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 SPOCD1Q6ZMY3 1216 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 CYP4V2Q6ZWL3 525 aaPredicted RBP17.95■□□□□ 0.46
HDAC7-227ENST00000548080 BMP8AQ7Z5Y6 402 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 SUGP1Q8IWZ8 645 aaKnown RBP17.95■□□□□ 0.46
HDAC7-227ENST00000548080 KCTD6Q8NC69 237 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 PJA1Q8NG27 643 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 HSPH1Q92598 858 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 SERPINB11Q96P15 392 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 OSBPL8Q9BZF1 889 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 DCLK3Q9C098 648 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 SPHK2Q9NRA0 654 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 DDIT4Q9NX09 232 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 XPO7Q9UIA9 1087 aaKnown RBP17.95■□□□□ 0.46
HDAC7-227ENST00000548080 GOLGA6L10A0A0M3HER8 536 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 NEDD8-MDP1E9PL57 170 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 IGLV3-27P01718 113 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 GLULP15104 373 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 PTPN7P35236 360 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 RDXP35241 583 aaKnown RBP17.95■□□□□ 0.46
HDAC7-227ENST00000548080 HARS2P49590 506 aaKnown RBP17.95■□□□□ 0.46
HDAC7-227ENST00000548080 ATXN1P54253 815 aaKnown RBP17.95■□□□□ 0.46
HDAC7-227ENST00000548080 DEUP1Q05D60 604 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 KDSRQ06136 332 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 NR1H3Q13133 447 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 ADAT2Q7Z6V5 191 aaKnown RBP17.95■□□□□ 0.46
HDAC7-227ENST00000548080 RALGPS2Q86X27 583 aaPredicted RBP17.95■□□□□ 0.46
HDAC7-227ENST00000548080 CCDC105Q8IYK2 499 aa17.95■□□□□ 0.46
HDAC7-227ENST00000548080 PGAP3Q96FM1 320 aaPredicted RBP17.95■□□□□ 0.46
HDAC7-227ENST00000548080 TCRBV7S2A1N4TA0A589 114 aa17.94■□□□□ 0.46
HDAC7-227ENST00000548080 ANTXRLA6NF34 631 aa17.94■□□□□ 0.46
HDAC7-227ENST00000548080 C3orf70A6NLC5 250 aaPredicted RBP17.94■□□□□ 0.46
HDAC7-227ENST00000548080 MAN2B1O00754 1011 aa17.94■□□□□ 0.46
HDAC7-227ENST00000548080 TRIM24O15164 1050 aa17.94■□□□□ 0.46
HDAC7-227ENST00000548080 ADH1CP00326 375 aa17.94■□□□□ 0.46
HDAC7-227ENST00000548080 F9P00740 461 aa17.94■□□□□ 0.46
HDAC7-227ENST00000548080 IGLV3-25P01717 112 aa17.94■□□□□ 0.46
HDAC7-227ENST00000548080 AOC1P19801 751 aa17.94■□□□□ 0.46
HDAC7-227ENST00000548080 OPRD1P41143 372 aa17.94■□□□□ 0.46
HDAC7-227ENST00000548080 GALK1P51570 392 aa17.94■□□□□ 0.46
HDAC7-227ENST00000548080 LLGL1Q15334 1064 aa17.94■□□□□ 0.46
HDAC7-227ENST00000548080 PPP2R5EQ16537 467 aa17.94■□□□□ 0.46
HDAC7-227ENST00000548080 ERMARDQ5T6L9 678 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms