RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 ZFXP17010 805 aaPredicted RBP13.07□□□□□ -0.32
SCAF11-209ENST00000547018 LRPAP1P30533 357 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 RPL10AP62906 217 aaKnown RBP13.07□□□□□ -0.32
SCAF11-209ENST00000547018 CHI3L2Q15782 390 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 TNS4Q8IZW8 715 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 PABPC5Q96DU9 382 aaKnown RBP13.07□□□□□ -0.32
SCAF11-209ENST00000547018 SIGLEC10Q96LC7 697 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 ZNF778Q96MU6 729 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 LRRC37BQ96QE4 947 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 TSSK1BQ9BXA7 367 aa13.07□□□□□ -0.32
SCAF11-209ENST00000547018 SMG5Q9UPR3 1016 aaKnown RBP13.07□□□□□ -0.32
SCAF11-209ENST00000547018 A0A0U1RQF3 1178 aa13.06□□□□□ -0.32
SCAF11-209ENST00000547018 ARHGAP42A6NI28 874 aa13.06□□□□□ -0.32
SCAF11-209ENST00000547018 CCL22O00626 93 aa13.06□□□□□ -0.32
SCAF11-209ENST00000547018 TRDMT1O14717 391 aaKnown RBP13.06□□□□□ -0.32
SCAF11-209ENST00000547018 PPP1R12AO14974 1030 aaPredicted RBP13.06□□□□□ -0.32
SCAF11-209ENST00000547018 BUD23O43709 281 aaKnown RBP13.06□□□□□ -0.32
SCAF11-209ENST00000547018 ADAMTS4O75173 837 aa13.06□□□□□ -0.32
SCAF11-209ENST00000547018 SNRPAP09012 282 aaKnown RBP13.06□□□□□ -0.32
SCAF11-209ENST00000547018 SLC5A3P53794 718 aa13.06□□□□□ -0.32
SCAF11-209ENST00000547018 NR1H3Q13133 447 aa13.06□□□□□ -0.32
SCAF11-209ENST00000547018 RASSF3Q86WH2 238 aa13.06□□□□□ -0.32
SCAF11-209ENST00000547018 SLC44A1Q8WWI5 657 aa13.06□□□□□ -0.32
SCAF11-209ENST00000547018 RSPH1Q8WYR4 309 aa13.06□□□□□ -0.32
SCAF11-209ENST00000547018 RILPQ96NA2 401 aa13.06□□□□□ -0.32
SCAF11-209ENST00000547018 EBNA1BP2Q99848 306 aaKnown RBP13.06□□□□□ -0.32
SCAF11-209ENST00000547018 DMAP1Q9NPF5 467 aaPredicted RBP13.06□□□□□ -0.32
SCAF11-209ENST00000547018 CHRAC1Q9NRG0 131 aa13.06□□□□□ -0.32
SCAF11-209ENST00000547018 KLC4Q9NSK0 619 aa13.06□□□□□ -0.32
SCAF11-209ENST00000547018 EURLQ9NYK6 297 aa13.06□□□□□ -0.32
SCAF11-209ENST00000547018 SCN4AP35499 1836 aa13.06□□□□□ -0.32
SCAF11-209ENST00000547018 FAM237BA0A1B0GVD1 139 aa13.06□□□□□ -0.32
SCAF11-209ENST00000547018 A0A1W2PQH9 124 aa13.06□□□□□ -0.32
SCAF11-209ENST00000547018 UNCXA6NJT0 531 aa13.06□□□□□ -0.32
SCAF11-209ENST00000547018 GABRDO14764 452 aa13.06□□□□□ -0.32
SCAF11-209ENST00000547018 GLRBP48167 497 aa13.06□□□□□ -0.32
SCAF11-209ENST00000547018 ZBTB17Q13105 803 aa13.06□□□□□ -0.32
SCAF11-209ENST00000547018 MTFR1Q15390 333 aa13.06□□□□□ -0.32
SCAF11-209ENST00000547018 FYB2Q5VWT5 728 aa13.06□□□□□ -0.32
SCAF11-209ENST00000547018 NUDCD3Q8IVD9 361 aa13.06□□□□□ -0.32
SCAF11-209ENST00000547018 PRR11Q96HE9 360 aaPredicted RBP13.06□□□□□ -0.32
SCAF11-209ENST00000547018 QKIQ96PU8 341 aaKnown RBP eCLIP13.06□□□□□ -0.329e-8■■■□□ 17.7
SCAF11-209ENST00000547018 EPAS1Q99814 870 aa13.06□□□□□ -0.32
SCAF11-209ENST00000547018 NMUR1Q9HB89 426 aa13.06□□□□□ -0.32
SCAF11-209ENST00000547018 CDH9Q9ULB4 789 aa13.06□□□□□ -0.32
SCAF11-209ENST00000547018 GIT1Q9Y2X7 761 aa13.06□□□□□ -0.32
SCAF11-209ENST00000547018 GOLGA8CPA6NN73 597 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 H0Y3Z8 333 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 TYROBPO43914 113 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 LYPLA1O75608 230 aaPredicted RBP13.05□□□□□ -0.32
SCAF11-209ENST00000547018 TYK2P29597 1187 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 GSCP56915 257 aaPredicted RBP13.05□□□□□ -0.32
SCAF11-209ENST00000547018 INHBEP58166 350 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 WASHC5Q12768 1159 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 TUSC3Q13454 348 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 RTN4RL1Q86UN2 441 aaPredicted RBP13.05□□□□□ -0.32
SCAF11-209ENST00000547018 ARID3BQ8IVW6 561 aaPredicted RBP13.05□□□□□ -0.32
SCAF11-209ENST00000547018 RIBC1Q8N443 379 aaPredicted RBP13.05□□□□□ -0.32
SCAF11-209ENST00000547018 DBF4BQ8NFT6 615 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 CENPIQ92674 756 aaPredicted RBP13.05□□□□□ -0.32
SCAF11-209ENST00000547018 CASP10Q92851 521 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 FAXDC2Q96IV6 333 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 KLHL5Q96PQ7 755 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 FRMD8P1Q9BZ68 369 aaPredicted RBP13.05□□□□□ -0.32
SCAF11-209ENST00000547018 SDR42E2A6NKP2 422 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 TCEA3O75764 348 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 SERPINB4P48594 390 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 INTS6LQ5JSJ4 861 aaKnown RBP13.05□□□□□ -0.32
SCAF11-209ENST00000547018 TTC39BQ5VTQ0 682 aaPredicted RBP13.05□□□□□ -0.32
SCAF11-209ENST00000547018 ZNF534Q76KX8 674 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 TTC7BQ86TV6 843 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 NACA2Q9H009 215 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 WDR6Q9NNW5 1121 aaKnown RBP13.05□□□□□ -0.32
SCAF11-209ENST00000547018 L3MBTL1Q9Y468 752 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 ANKRD12Q6UB98 2062 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 PAGE1O75459 146 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 KRT38O76015 456 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 CKBP12277 381 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 ALDH3A1P30838 453 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 PLEKHG4Q58EX7 1191 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 CYB5D1Q6P9G0 228 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 RAPH1Q70E73 1250 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 GSDMBQ8TAX9 411 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 CAPNS2Q96L46 248 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 FCRL2Q96LA5 508 aaPredicted RBP13.05□□□□□ -0.32
SCAF11-209ENST00000547018 PLAC1Q9HBJ0 212 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 HEY2Q9UBP5 337 aa13.05□□□□□ -0.32
SCAF11-209ENST00000547018 ZMYND8Q9ULU4 1186 aaPredicted RBP13.05□□□□□ -0.32
SCAF11-209ENST00000547018 E7ESA3 106 aa13.04□□□□□ -0.32
SCAF11-209ENST00000547018 TROVE2P10155 538 aaKnown RBP eCLIP13.04□□□□□ -0.32
SCAF11-209ENST00000547018 PTPN3P26045 913 aa13.04□□□□□ -0.32
SCAF11-209ENST00000547018 CHRNA4P43681 627 aa13.04□□□□□ -0.32
SCAF11-209ENST00000547018 CXCR3P49682 368 aa13.04□□□□□ -0.32
SCAF11-209ENST00000547018 TUBP50607 506 aa13.04□□□□□ -0.32
SCAF11-209ENST00000547018 MBTPS1Q14703 1052 aa13.04□□□□□ -0.32
SCAF11-209ENST00000547018 PDK4Q16654 411 aa13.04□□□□□ -0.32
SCAF11-209ENST00000547018 CTXN3Q4LDR2 81 aa13.04□□□□□ -0.32
SCAF11-209ENST00000547018 TAF1BQ53T94 588 aaPredicted RBP13.04□□□□□ -0.32
SCAF11-209ENST00000547018 XKR4Q5GH76 650 aa13.04□□□□□ -0.32
SCAF11-209ENST00000547018 SPOUT1Q5T280 376 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms