RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 R3HCC1LQ7Z5L2 792 aaKnown RBP4.53□□□□□ -1.68
SNHG1-222ENST00000545308 ADAMTS15Q8TE58 950 aa4.53□□□□□ -1.68
SNHG1-222ENST00000545308 OVCA2Q8WZ82 227 aa4.53□□□□□ -1.68
SNHG1-222ENST00000545308 LPIN2Q92539 896 aa4.53□□□□□ -1.68
SNHG1-222ENST00000545308 CTHRC1Q96CG8 243 aa4.53□□□□□ -1.68
SNHG1-222ENST00000545308 R3HDM4Q96D70 268 aa4.53□□□□□ -1.68
SNHG1-222ENST00000545308 PRR11Q96HE9 360 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-222ENST00000545308 RSRC1Q96IZ7 334 aaKnown RBP4.53□□□□□ -1.68
SNHG1-222ENST00000545308 EIF3CQ99613 913 aaKnown RBP4.53□□□□□ -1.68
SNHG1-222ENST00000545308 RIOX1Q9H6W3 641 aa4.53□□□□□ -1.68
SNHG1-222ENST00000545308 GLOD4Q9HC38 313 aa4.53□□□□□ -1.68
SNHG1-222ENST00000545308 AKIP1Q9NQ31 210 aa4.53□□□□□ -1.68
SNHG1-222ENST00000545308 TRIM36Q9NQ86 728 aa4.53□□□□□ -1.68
SNHG1-222ENST00000545308 TLR8Q9NR97 1041 aaKnown RBP4.53□□□□□ -1.68
SNHG1-222ENST00000545308 RXFP3Q9NSD7 469 aa4.53□□□□□ -1.68
SNHG1-222ENST00000545308 NKX1-2Q9UD57 310 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-222ENST00000545308 ZNHIT2Q9UHR6 403 aa4.53□□□□□ -1.68
SNHG1-222ENST00000545308 TRPC5Q9UL62 973 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-222ENST00000545308 ASAP1Q9ULH1 1129 aa4.53□□□□□ -1.68
SNHG1-222ENST00000545308 NOX1Q9Y5S8 564 aa4.53□□□□□ -1.68
SNHG1-222ENST00000545308 PLEKHH2Q8IVE3 1493 aa4.53□□□□□ -1.68
SNHG1-222ENST00000545308 NPHP4O75161 1426 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-222ENST00000545308 TROQ12816 1431 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-222ENST00000545308 RNF17Q9BXT8 1623 aaKnown RBP4.53□□□□□ -1.68
SNHG1-222ENST00000545308 POLR2AP24928 1970 aaKnown RBP4.53□□□□□ -1.68
SNHG1-222ENST00000545308 TNRQ92752 1358 aa4.53□□□□□ -1.69
SNHG1-222ENST00000545308 CFAP65Q6ZU64 1925 aaKnown RBP4.52□□□□□ -1.69
SNHG1-222ENST00000545308 SPATA31A6Q5VVP1 1343 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 ADGBQ8N7X0 1667 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 ITSN2Q9NZM3 1697 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 A2MP01023 1474 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 NLRP1Q9C000 1473 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 CCDC187A0A096LP49 1063 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 MBD3L5A6NJ08 208 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-222ENST00000545308 A8MVJ9 347 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 RNASET2O00584 256 aaKnown RBP4.52□□□□□ -1.69
SNHG1-222ENST00000545308 KIAA0355O15063 1070 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 NKX2-8O15522 239 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 CA12O43570 354 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 DOK2O60496 412 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 TMEM63AO94886 807 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 ACP5P13686 325 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 CD19P15391 556 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 CHN1P15882 459 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 LMO1P25800 156 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 PSMC2P35998 433 aaKnown RBP4.52□□□□□ -1.69
SNHG1-222ENST00000545308 GGT5P36269 586 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 PGM1P36871 562 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 CCR9P51686 369 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 FOXL2P58012 376 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 RBM6P78332 1123 aaKnown RBP4.52□□□□□ -1.69
SNHG1-222ENST00000545308 RNASELQ05823 741 aaKnown RBP4.52□□□□□ -1.69
SNHG1-222ENST00000545308 DEUP1Q05D60 604 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 ERV3-1Q14264 604 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 MEA1Q16626 185 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 PRICKLE4Q2TBC4 344 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 BEAN1Q3B7T3 259 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 CBWD5Q5RIA9 395 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 KIAA1324Q6UXG2 1013 aaKnown RBP4.52□□□□□ -1.69
SNHG1-222ENST00000545308 BRINP3Q76B58 766 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-222ENST00000545308 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.52□□□□□ -1.69
SNHG1-222ENST00000545308 PTGR2Q8N8N7 351 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-222ENST00000545308 FSIP1Q8NA03 581 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 C1orf131Q8NDD1 294 aaKnown RBP4.52□□□□□ -1.69
SNHG1-222ENST00000545308 ZMIZ2Q8NF64 920 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 MYCBPAPQ8TBZ2 947 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 KCNG4Q8TDN1 519 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 SNRNP27Q8WVK2 155 aaKnown RBP4.52□□□□□ -1.69
SNHG1-222ENST00000545308 FUBP1Q96AE4 644 aaKnown RBP4.52□□□□□ -1.69
SNHG1-222ENST00000545308 RSPRY1Q96DX4 576 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 ZNF764Q96H86 408 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-222ENST00000545308 APOPT1Q96IL0 206 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 TREX2Q9BQ50 279 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-222ENST00000545308 FUZQ9BT04 418 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 SAP30LQ9HAJ7 183 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 SMYD2Q9NRG4 433 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 FBXO28Q9NVF7 368 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 TMLHEQ9NVH6 421 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 PTGFRNQ9P2B2 879 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 DKK2Q9UBU2 259 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 BAG5Q9UL15 447 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 NAALADL1Q9UQQ1 740 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 UBE2J1Q9Y385 318 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-222ENST00000545308 MIA2Q96PC5 1412 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 SYNMO15061 1565 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 UGGT1Q9NYU2 1555 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 JCADQ9P266 1359 aa4.52□□□□□ -1.69
SNHG1-222ENST00000545308 LRRC7Q96NW7 1537 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 KDM5DQ9BY66 1539 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 IQGAP1P46940 1657 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 GAGE12BA1L429 117 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 PI4KAP2A4QPH2 592 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 GAGE12HA6NDE8 117 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 VWC2LB2RUY7 222 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 H3BNC9 293 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 PEX12O00623 359 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 SLC16A3O15427 465 aaKnown RBP4.51□□□□□ -1.69
SNHG1-222ENST00000545308 SEPT4O43236 478 aa4.51□□□□□ -1.69
SNHG1-222ENST00000545308 DHX16O60231 1041 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms