RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 TRA2BP62995 288 aaKnown RBP9.1□□□□□ -0.95
VPS13D-212ENST00000543766 SPIDRQ14159 915 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 DHCR24Q15392 516 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 DEGS2Q6QHC5 323 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 SLFN11Q7Z7L1 901 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 TPRA1Q86W33 373 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 SNX29Q8TEQ0 813 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 RAB7BQ96AH8 199 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 ITPKCQ96DU7 683 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 LTV1Q96GA3 475 aaPredicted RBP9.1□□□□□ -0.95
VPS13D-212ENST00000543766 ZNF597Q96LX8 424 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 TOPORSQ9NS56 1045 aaPredicted RBP9.1□□□□□ -0.95
VPS13D-212ENST00000543766 KLHL9Q9P2J3 617 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 KLHL3Q9UH77 587 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 DCDC2Q9UHG0 476 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 A0A0D9SFI3 127 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 PTPDC1A2A3K4 754 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 KIAA0391O15091 583 aaKnown RBP9.1□□□□□ -0.95
VPS13D-212ENST00000543766 LILRB5O75023 590 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 IFNA16P05015 189 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 M6PRP20645 277 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 DHPSP49366 369 aaPredicted RBP9.1□□□□□ -0.95
VPS13D-212ENST00000543766 TAP2Q03519 686 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 GFOD2Q3B7J2 385 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 ANKRD40Q6AI12 368 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 ATAD1Q8NBU5 361 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 PURBQ96QR8 312 aaKnown RBP9.1□□□□□ -0.95
VPS13D-212ENST00000543766 PKP4Q99569 1192 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 TCF25Q9BQ70 676 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 NOC4LQ9BVI4 516 aaKnown RBP9.1□□□□□ -0.95
VPS13D-212ENST00000543766 WDR26Q9H7D7 661 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 OLFML3Q9NRN5 406 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 PSMC3IPQ9P2W1 217 aaPredicted RBP9.1□□□□□ -0.95
VPS13D-212ENST00000543766 PADI4Q9UM07 663 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 TNS1Q9HBL0 1735 aaKnown RBP9.1□□□□□ -0.95
VPS13D-212ENST00000543766 THSD7AQ9UPZ6 1657 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 TTC26A0AVF1 554 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 CENPBD1B2RD01 187 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 GYPCP04921 128 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 ATP1A1P05023 1023 aaKnown RBP9.09□□□□□ -0.95
VPS13D-212ENST00000543766 GSTA1P08263 222 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 PRKAR1AP10644 381 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 AFF3P51826 1226 aaKnown RBP9.09□□□□□ -0.95
VPS13D-212ENST00000543766 CD300CQ08708 224 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 NPTX1Q15818 432 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 QPCTQ16769 361 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 PARP6Q2NL67 630 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 TBRG1Q3YBR2 411 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 CYP4A22Q5TCH4 519 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 KRT79Q5XKE5 535 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 ILDR2Q71H61 639 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 LRRC6Q86X45 466 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 KRT73Q86Y46 540 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 PM20D2Q8IYS1 436 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 SH2D3CQ8N5H7 860 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 CHST13Q8NET6 341 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 MARC2Q969Z3 335 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 ZUFSPQ96AP4 578 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 LURAP1Q96LR2 239 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 SYBUQ9NX95 663 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 PSME2Q9UL46 239 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 QSER1Q2KHR3 1735 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 H0Y858 1186 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 JUNDP17535 347 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 NCF2P19878 526 aaPredicted RBP9.09□□□□□ -0.95
VPS13D-212ENST00000543766 STARP49675 285 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 NRLP54845 237 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 STX3Q13277 289 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 MRPL58Q14197 206 aaKnown RBP9.09□□□□□ -0.95
VPS13D-212ENST00000543766 SEZ6L2Q6UXD5 910 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 C3orf62Q6ZUJ4 267 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 ANKS3Q6ZW76 656 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 C12orf56Q8IXR9 622 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 NAXEQ8NCW5 288 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 ZDHHC12Q96GR4 267 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 GPRC5DQ9NZD1 345 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 UBA2Q9UBT2 640 aaPredicted RBP9.09□□□□□ -0.95
VPS13D-212ENST00000543766 MAD2L2Q9UI95 211 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 SLC22A7Q9Y694 548 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 MEX3AA1L020 520 aaKnown RBP9.09□□□□□ -0.95
VPS13D-212ENST00000543766 A8MUI8 341 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 FADS2P1A8MWK0 482 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 POLR1CO15160 346 aaPredicted RBP9.09□□□□□ -0.95
VPS13D-212ENST00000543766 TEX33O43247 280 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 DOK2O60496 412 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 TAF5LO75529 589 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 UFL1O94874 794 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 IL1R1P14778 569 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 STX2P32856 288 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 CD79BP40259 229 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 MAN2A2P49641 1150 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 SERPINB9P50453 376 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 EPHB4P54760 987 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 CKAP4Q07065 602 aaKnown RBP9.09□□□□□ -0.95
VPS13D-212ENST00000543766 MESDQ14696 234 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 UBE2UQ5VVX9 321 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 TPGS2Q68CL5 300 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 SHC4Q6S5L8 630 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 LRIG3Q6UXM1 1119 aa9.09□□□□□ -0.95
VPS13D-212ENST00000543766 RAB11FIP2Q7L804 512 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms