RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, human

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNFRSF1A-215	ENST00000543359	PLA2G4C	Q9UP65	541 aa		13.57	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	SIK3	Q9Y2K2	1263 aa		13.57	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	ATXN2	Q99700	1313 aa	Known RBP	13.57	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	USP24	Q9UPU5	2620 aa		13.57	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	ZZEF1	O43149	2961 aa		13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	MAP1B	P46821	2468 aa	Known RBP	13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	LRRC10B	A6NIK2	292 aa		13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	DAB1	O75553	588 aa		13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	APOE	P02649	317 aa		13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	ATP5B	P06576	529 aa	Known RBP	13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	ADRB1	P08588	477 aa		13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	ZNF18	P17022	549 aa		13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	CHRNB2	P17787	502 aa		13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	POLR2E	P19388	210 aa	Known RBP	13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	NOS2	P35228	1153 aa		13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	DPP6	P42658	865 aa		13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	ARID5B	Q14865	1188 aa		13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	NCAPH	Q15003	741 aa		13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	FNDC3B	Q53EP0	1204 aa	Known RBP	13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	ZDHHC17	Q8IUH5	632 aa		13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	CARNMT1	Q8N4J0	409 aa		13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	ZNF557	Q8N988	423 aa	Predicted RBP	13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	TMEM35B	Q8NCS4	154 aa		13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	DNASE2B	Q8WZ79	361 aa		13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	PRCC	Q92733	491 aa	Predicted RBP	13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	IGSF8	Q969P0	613 aa		13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	HSPA12B	Q96MM6	686 aa		13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	NPY6R	Q99463	290 aa		13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	MTG2	Q9H4K7	406 aa		13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	FAM204A	Q9H8W3	233 aa		13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	TMEM9B	Q9NQ34	198 aa		13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	ANLN	Q9NQW6	1124 aa		13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	DDIT4	Q9NX09	232 aa		13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	NOCT	Q9UK39	431 aa	Known RBP	13.56	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	PES1	O00541	588 aa	Known RBP	13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	KCNK5	O95279	499 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	SERPINF2	P08697	491 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	SLC2A3	P11169	496 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	ENG	P17813	658 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	TFE3	P19532	575 aa	Predicted RBP	13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	OXTR	P30559	389 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	CCR1	P32246	355 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	MATK	P42679	507 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	CTSO	P43234	321 aa	Predicted RBP	13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	IRAK1	P51617	712 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	COPB1	P53618	953 aa	Known RBP	13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	SNX16	P57768	344 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	RPS14	P62263	151 aa	Known RBP	13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	DUOXA1	Q1HG43	343 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	HNRNPA1L2	Q32P51	320 aa	Known RBP	13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	C5orf22	Q49AR2	442 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	PITRM1	Q5JRX3	1037 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	TAF3	Q5VWG9	929 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	TRNP1	Q6NT89	227 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	FBXL22	Q6P050	247 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	BNIPL	Q7Z465	357 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	C14orf80	Q86SX3	495 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	CHSY1	Q86X52	802 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	XYLT1	Q86Y38	959 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	APCDD1	Q8J025	514 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	ATP6V0D2	Q8N8Y2	350 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	KDM1B	Q8NB78	822 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	CADM4	Q8NFZ8	388 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	C1orf216	Q8TAB5	229 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	CEP76	Q8TAP6	659 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	EPS8L1	Q8TE68	723 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	C18orf8	Q96DM3	657 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	GPR174	Q9BXC1	333 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	FSCN3	Q9NQT6	498 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	PIGV	Q9NUD9	493 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	KIAA1522	Q9P206	1035 aa	Predicted RBP	13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	LIMA1	Q9UHB6	759 aa	Known RBP	13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	SLC6A14	Q9UN76	642 aa		13.55	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	SYNJ2BP-COX16	A0A087WUM0	186 aa		13.54	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	ADCY5	O95622	1261 aa		13.54	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	LSM8	O95777	96 aa	Known RBP	13.54	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	MME	P08473	750 aa		13.54	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	MAOB	P27338	520 aa		13.54	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	SCNN1A	P37088	669 aa		13.54	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	CXCR3	P49682	368 aa		13.54	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	NOMO3	P69849	1222 aa		13.54	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	ARID5A	Q03989	594 aa		13.54	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	AUH	Q13825	339 aa	Known RBP	13.54	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	PLEKHG6	Q3KR16	790 aa		13.54	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	C2CD6	Q53TS8	623 aa		13.54	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	C9orf64	Q5T6V5	341 aa		13.54	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	CXorf57	Q6NSI4	855 aa	Known RBP	13.54	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	CIR1	Q86X95	450 aa	Predicted RBP	13.54	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	CACUL1	Q86Y37	369 aa		13.54	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	ZNF683	Q8IZ20	524 aa		13.54	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	SLC20A1	Q8WUM9	679 aa		13.54	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	FOXJ1	Q92949	421 aa		13.54	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	ALG14	Q96F25	216 aa		13.54	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	PGAP3	Q96FM1	320 aa	Predicted RBP	13.54	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	NUP58	Q9BVL2	599 aa		13.54	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	NUSAP1	Q9BXS6	441 aa	Known RBP	13.54	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	RSPH9	Q9H1X1	276 aa	Predicted RBP	13.54	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	ANO10	Q9NW15	660 aa		13.54	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	ARHGEF38	Q9NXL2	777 aa		13.54	□□□□□ -0.24
TNFRSF1A-215	ENST00000543359	COX16	Q9P0S2	106 aa		13.54	□□□□□ -0.24

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