RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 TBC1D3IA0A087WXS9 549 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 TBC1D3EA0A087X179 549 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 TBC1D3KA0A087X1G2 549 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 A0A1W2PNU3 283 aaPredicted RBP5□□□□□ -1.61
LIMS1-214ENST00000542845 A0A1W2PP55 124 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 A0A1W2PR77 199 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 TBC1D3FA6NER0 549 aaPredicted RBP5□□□□□ -1.61
LIMS1-214ENST00000542845 LRRC72A6NJI9 287 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 A8MXQ7 604 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 TBC1D3LB9A6J9 549 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 RTN2O75298 545 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 CDC45O75419 566 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 CTDNEP1O95476 244 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 CYBBP04839 570 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 TBC1D3HP0C7X1 549 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 PLA2G4BP0C869 781 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 TGM2P21980 687 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 MAT2AP31153 395 aaKnown RBP5□□□□□ -1.61
LIMS1-214ENST00000542845 DUSP3P51452 185 aaPredicted RBP5□□□□□ -1.61
LIMS1-214ENST00000542845 NXPH1P58417 271 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 CAMK2GQ13555 558 aaPredicted RBP5□□□□□ -1.61
LIMS1-214ENST00000542845 ENPP2Q13822 863 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 STAT4Q14765 748 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 CLCA4Q14CN2 919 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 E2F5Q15329 346 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 ISXQ2M1V0 245 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 C8orf34Q49A92 452 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 TTC38Q5R3I4 469 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 C10orf120Q5SQS8 335 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 SFMBT2Q5VUG0 894 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 CDCP2Q5VXM1 449 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 TMEM215Q68D42 235 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 ZNF776Q68DI1 518 aaPredicted RBP5□□□□□ -1.61
LIMS1-214ENST00000542845 TBC1D3GQ6DHY5 549 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 SLFN12LQ6IEE8 588 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 TBC1D3CQ6IPX1 549 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 TMEM214Q6NUQ4 689 aaKnown RBP5□□□□□ -1.61
LIMS1-214ENST00000542845 CRELD2Q6UXH1 353 aaPredicted RBP5□□□□□ -1.61
LIMS1-214ENST00000542845 VASH2Q86V25 355 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 SPATS2Q86XZ4 545 aaKnown RBP5□□□□□ -1.61
LIMS1-214ENST00000542845 TBC1D3Q8IZP1 549 aaPredicted RBP5□□□□□ -1.61
LIMS1-214ENST00000542845 SLC25A45Q8N413 288 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 LRRC52Q8N7C0 313 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 SYT2Q8N9I0 419 aaPredicted RBP5□□□□□ -1.61
LIMS1-214ENST00000542845 ZSCAN1Q8NBB4 408 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 ZSWIM2Q8NEG5 633 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 OR14C36Q8NHC7 312 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 ZNF564Q8TBZ8 553 aaPredicted RBP5□□□□□ -1.61
LIMS1-214ENST00000542845 IFI44Q8TCB0 444 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 KBTBD7Q8WVZ9 684 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 OVCA2Q8WZ82 227 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 KCNB2Q92953 911 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 HPS3Q969F9 1004 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 P2RY11Q96G91 374 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 PIWIL1Q96J94 861 aaKnown RBP5□□□□□ -1.61
LIMS1-214ENST00000542845 CEP295NLQ96MC4 621 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 CDK15Q96Q40 435 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 SEMA3CQ99985 751 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 MRPL45Q9BRJ2 306 aaKnown RBP5□□□□□ -1.61
LIMS1-214ENST00000542845 B3GNT5Q9BYG0 378 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 MTMR12Q9C0I1 747 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 DPEP3Q9H4B8 488 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 PCIF1Q9H4Z3 704 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 PDE11AQ9HCR9 933 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 PRSS16Q9NQE7 514 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 ZNF71Q9NQZ8 489 aaPredicted RBP5□□□□□ -1.61
LIMS1-214ENST00000542845 UCKL1Q9NWZ5 548 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 GDAP2Q9NXN4 497 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 MARK1Q9P0L2 795 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 SERGEFQ9UGK8 458 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 FBXO10Q9UK96 956 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 ITGA11Q9UKX5 1188 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 SLC27A6Q9Y2P4 619 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 KIF26BQ2KJY2 2108 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 DOCK9Q9BZ29 2069 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 LRRK1Q38SD2 2015 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 CLEC18AA5D8T8 446 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 VPS37CA5D8V6 355 aaPredicted RBP4.99□□□□□ -1.61
LIMS1-214ENST00000542845 MID1O15344 667 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 TIMM44O43615 452 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 GREM1O60565 184 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 PFKFB2O60825 505 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 RNASEH1O60930 286 aaKnown RBP4.99□□□□□ -1.61
LIMS1-214ENST00000542845 LILRA1O75019 489 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 PRPF6O94906 941 aaKnown RBP4.99□□□□□ -1.61
LIMS1-214ENST00000542845 IL2RAP01589 272 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 PIGRP01833 764 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 TNNC2P02585 160 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 ITGB2P05107 769 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 ALPPL2P10696 532 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 WARSP23381 471 aaKnown RBP4.99□□□□□ -1.61
LIMS1-214ENST00000542845 DGKAP23743 735 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 ELAVL4P26378 380 aaKnown RBP4.99□□□□□ -1.61
LIMS1-214ENST00000542845 SLC5A2P31639 672 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 CHKAP35790 457 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 PLA2G4AP47712 749 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 RXRGP48443 463 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 SLC5A3P53794 718 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 ASIC1P78348 528 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 IRX6P78412 446 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms