RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 RPS14P62263 151 aaKnown RBP16.18■□□□□ 0.18
VPS33A-206ENST00000542310 PTK2Q05397 1052 aa16.18■□□□□ 0.18
VPS33A-206ENST00000542310 HNRNPA1L2Q32P51 320 aaKnown RBP16.18■□□□□ 0.18
VPS33A-206ENST00000542310 DCAF6Q58WW2 860 aa16.18■□□□□ 0.18
VPS33A-206ENST00000542310 EFHC1Q5JVL4 640 aa16.18■□□□□ 0.18
VPS33A-206ENST00000542310 IL27RAQ6UWB1 636 aa16.18■□□□□ 0.18
VPS33A-206ENST00000542310 CHSY1Q86X52 802 aa16.18■□□□□ 0.18
VPS33A-206ENST00000542310 CREBRFQ8IUR6 639 aa16.18■□□□□ 0.18
VPS33A-206ENST00000542310 ZCCHC9Q8N567 271 aaKnown RBP16.18■□□□□ 0.18
VPS33A-206ENST00000542310 ZNF366Q8N895 744 aa16.18■□□□□ 0.18
VPS33A-206ENST00000542310 MYEOVQ96EZ4 313 aa16.18■□□□□ 0.18
VPS33A-206ENST00000542310 PPP1R13BQ96KQ4 1090 aa16.18■□□□□ 0.18
VPS33A-206ENST00000542310 CPXM1Q96SM3 734 aa16.18■□□□□ 0.18
VPS33A-206ENST00000542310 RSPH9Q9H1X1 276 aaPredicted RBP16.18■□□□□ 0.18
VPS33A-206ENST00000542310 SIX2Q9NPC8 291 aa16.18■□□□□ 0.18
VPS33A-206ENST00000542310 OSGEPQ9NPF4 335 aa16.18■□□□□ 0.18
VPS33A-206ENST00000542310 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.18■□□□□ 0.18
VPS33A-206ENST00000542310 SLC12A6Q9UHW9 1150 aa16.18■□□□□ 0.18
VPS33A-206ENST00000542310 INTS6Q9UL03 887 aaKnown RBP16.18■□□□□ 0.18
VPS33A-206ENST00000542310 CEP83Q9Y592 693 aa16.18■□□□□ 0.18
VPS33A-206ENST00000542310 USP24Q9UPU5 2620 aa16.17■□□□□ 0.18
VPS33A-206ENST00000542310 F5H5T6 163 aa16.17■□□□□ 0.18
VPS33A-206ENST00000542310 BCAT2O15382 392 aaPredicted RBP16.17■□□□□ 0.18
VPS33A-206ENST00000542310 CER1O95813 267 aa16.17■□□□□ 0.18
VPS33A-206ENST00000542310 ZNF883P0CG24 379 aa16.17■□□□□ 0.18
VPS33A-206ENST00000542310 CD59P13987 128 aa16.17■□□□□ 0.18
VPS33A-206ENST00000542310 TACR2P21452 398 aa16.17■□□□□ 0.18
VPS33A-206ENST00000542310 CDK17Q00537 523 aa16.17■□□□□ 0.18
VPS33A-206ENST00000542310 SFSWAPQ12872 951 aaKnown RBP16.17■□□□□ 0.18
VPS33A-206ENST00000542310 FOXC1Q12948 553 aa16.17■□□□□ 0.18
VPS33A-206ENST00000542310 SLC12A1Q13621 1099 aa16.17■□□□□ 0.18
VPS33A-206ENST00000542310 ZC3H12AQ5D1E8 599 aaKnown RBP16.17■□□□□ 0.18
VPS33A-206ENST00000542310 CT47A1Q5JQC4 288 aaPredicted RBP16.17■□□□□ 0.18
VPS33A-206ENST00000542310 PITRM1Q5JRX3 1037 aa16.17■□□□□ 0.18
VPS33A-206ENST00000542310 USP30Q70CQ3 517 aa16.17■□□□□ 0.18
VPS33A-206ENST00000542310 LGI2Q8N0V4 545 aa16.17■□□□□ 0.18
VPS33A-206ENST00000542310 CARNMT1Q8N4J0 409 aa16.17■□□□□ 0.18
VPS33A-206ENST00000542310 MRGPRX3Q96LB0 322 aa16.17■□□□□ 0.18
VPS33A-206ENST00000542310 BTBD1Q9H0C5 482 aa16.17■□□□□ 0.18
VPS33A-206ENST00000542310 FAM204AQ9H8W3 233 aa16.17■□□□□ 0.18
VPS33A-206ENST00000542310 SGK2Q9HBY8 427 aa16.17■□□□□ 0.18
VPS33A-206ENST00000542310 KIAA1522Q9P206 1035 aaPredicted RBP16.17■□□□□ 0.18
VPS33A-206ENST00000542310 XPO7Q9UIA9 1087 aaKnown RBP16.17■□□□□ 0.18
VPS33A-206ENST00000542310 CEP295Q9C0D2 2601 aa16.17■□□□□ 0.18
VPS33A-206ENST00000542310 TMEM131Q92545 1883 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 A0A1B0GVM2 712 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 TCAF2A6NFQ2 919 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 KCNU1A8MYU2 1149 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 H0Y626 953 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 RNASEH1O60930 286 aaKnown RBP16.16■□□□□ 0.18
VPS33A-206ENST00000542310 DAB1O75553 588 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 TRIM16O95361 564 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 SEMA4FO95754 770 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 ABCB4P21439 1286 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 MAOBP27338 520 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 CCR1P32246 355 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 OXCT1P55809 520 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 BPIFB4P59827 614 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 APBA1Q02410 837 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 DPCR1Q3MIW9 517 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 RABGAP1LQ5R372 815 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 RAP1GAP2Q684P5 730 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 OLFML1Q6UWY5 402 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 C11orf57Q6ZUT1 292 aaPredicted RBP16.16■□□□□ 0.18
VPS33A-206ENST00000542310 SLC26A9Q7LBE3 791 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 ZDHHC17Q8IUH5 632 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 WDTC1Q8N5D0 677 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 C1orf131Q8NDD1 294 aaKnown RBP16.16■□□□□ 0.18
VPS33A-206ENST00000542310 ZNF397Q8NF99 534 aaPredicted RBP16.16■□□□□ 0.18
VPS33A-206ENST00000542310 C1orf216Q8TAB5 229 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 PRMT1Q99873 361 aaKnown RBP16.16■□□□□ 0.18
VPS33A-206ENST00000542310 ADAM33Q9BZ11 813 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 MIR1-1HGQ9H1L0 117 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 NUP62CLQ9H1M0 184 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 PABPC3Q9H361 631 aaKnown RBP16.16■□□□□ 0.18
VPS33A-206ENST00000542310 NDST4Q9H3R1 872 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 TMEM51Q9NW97 253 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 DDIT4Q9NX09 232 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 DNAJC12Q9UKB3 198 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 AJAP1Q9UKB5 411 aaPredicted RBP16.16■□□□□ 0.18
VPS33A-206ENST00000542310 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.16■□□□□ 0.18
VPS33A-206ENST00000542310 PLXNA2O75051 1894 aa16.16■□□□□ 0.18
VPS33A-206ENST00000542310 EDDM13A0A1B0GTR0 161 aa16.15■□□□□ 0.18
VPS33A-206ENST00000542310 TARSL2A2RTX5 802 aaKnown RBP16.15■□□□□ 0.18
VPS33A-206ENST00000542310 ACSL1P33121 698 aa16.15■□□□□ 0.18
VPS33A-206ENST00000542310 KRT9P35527 623 aa16.15■□□□□ 0.18
VPS33A-206ENST00000542310 AFF3P51826 1226 aaKnown RBP16.15■□□□□ 0.18
VPS33A-206ENST00000542310 PITX1P78337 314 aaPredicted RBP16.15■□□□□ 0.18
VPS33A-206ENST00000542310 SULT2A1Q06520 285 aa16.15■□□□□ 0.18
VPS33A-206ENST00000542310 VWA3BQ502W6 1294 aa16.15■□□□□ 0.18
VPS33A-206ENST00000542310 FSCBQ5H9T9 825 aa16.15■□□□□ 0.18
VPS33A-206ENST00000542310 MIIPQ5JXC2 388 aa16.15■□□□□ 0.18
VPS33A-206ENST00000542310 FAM183BPQ6ZVS7 135 aa16.15■□□□□ 0.18
VPS33A-206ENST00000542310 FAM124AQ86V42 546 aa16.15■□□□□ 0.18
VPS33A-206ENST00000542310 PASD1Q8IV76 773 aa16.15■□□□□ 0.18
VPS33A-206ENST00000542310 FAM71AQ8IYT1 594 aa16.15■□□□□ 0.18
VPS33A-206ENST00000542310 DEFB106AQ8N104 65 aa16.15■□□□□ 0.18
VPS33A-206ENST00000542310 CFAP52Q8N1V2 620 aa16.15■□□□□ 0.18
VPS33A-206ENST00000542310 OR2I1PQ8NGU4 316 aa16.15■□□□□ 0.18
VPS33A-206ENST00000542310 TUBGCP2Q9BSJ2 902 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms