RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-210	ENST00000541488	SLC39A10	Q9ULF5	831 aa		4.41	□□□□□ -1.7
PRKDC-210	ENST00000541488	KIF28P	B7ZC32	967 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	ANXA6	P08133	673 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	PLA2G2A	P14555	144 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	TGM2	P21980	687 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	POLD2	P49005	469 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	TAS2R50	P59544	299 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	AAK1	Q2M2I8	961 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	DGKK	Q5KSL6	1271 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	UBAP2	Q5T6F2	1119 aa	Known RBP	4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	IZUMO3	Q5VZ72	239 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	TTLL5	Q6EMB2	1281 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	RINT1	Q6NUQ1	792 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	SLC39A5	Q6ZMH5	540 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	CYB5R4	Q7L1T6	521 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	DPP9	Q86TI2	863 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	SKAP1	Q86WV1	359 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	GPSM1	Q86YR5	675 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	ADGRF3	Q8IZF5	1079 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	FAM47B	Q8NA70	645 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	BRI3BP	Q8WY22	251 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	LPAR1	Q92633	364 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	REXO5	Q96IC2	774 aa	Known RBP	4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	ZNF479	Q96JC4	524 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	CCDC138	Q96M89	665 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	ADAD1	Q96M93	576 aa	Known RBP	4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	MYLK2	Q9H1R3	596 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	CCDC134	Q9H6E4	229 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	FZD3	Q9NPG1	666 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	HELLS	Q9NRZ9	838 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	WWOX	Q9NZC7	414 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	IGSF9	Q9P2J2	1179 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	SLC12A4	Q9UP95	1085 aa		4.4	□□□□□ -1.71
PRKDC-210	ENST00000541488	KIF3B	O15066	747 aa		4.39	□□□□□ -1.71
PRKDC-210	ENST00000541488	DNPH1	O43598	174 aa		4.39	□□□□□ -1.71
PRKDC-210	ENST00000541488	RPP40	O75818	363 aa	Known RBP	4.39	□□□□□ -1.71
PRKDC-210	ENST00000541488	ARRB2	P32121	409 aa		4.39	□□□□□ -1.71
PRKDC-210	ENST00000541488	GNAL	P38405	381 aa		4.39	□□□□□ -1.71
PRKDC-210	ENST00000541488	ALDH18A1	P54886	795 aa	Known RBP	4.39	□□□□□ -1.71
PRKDC-210	ENST00000541488	FAM3B	P58499	235 aa	Predicted RBP	4.39	□□□□□ -1.71
PRKDC-210	ENST00000541488	GALNT3	Q14435	633 aa		4.39	□□□□□ -1.71
PRKDC-210	ENST00000541488	GGT6	Q6P531	493 aa		4.39	□□□□□ -1.71
PRKDC-210	ENST00000541488	CTU1	Q7Z7A3	348 aa	Known RBP	4.39	□□□□□ -1.71
PRKDC-210	ENST00000541488	OR52N4	Q8NGI2	321 aa		4.39	□□□□□ -1.71
PRKDC-210	ENST00000541488	CENPI	Q92674	756 aa	Predicted RBP	4.39	□□□□□ -1.71
PRKDC-210	ENST00000541488	INPP5D	Q92835	1189 aa		4.39	□□□□□ -1.71
PRKDC-210	ENST00000541488	PRPF18	Q99633	342 aa	Known RBP	4.39	□□□□□ -1.71
PRKDC-210	ENST00000541488	MECR	Q9BV79	373 aa		4.39	□□□□□ -1.71
PRKDC-210	ENST00000541488	PHTF1	Q9UMS5	762 aa		4.39	□□□□□ -1.71
PRKDC-210	ENST00000541488	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	4.39	□□□□□ -1.71
PRKDC-210	ENST00000541488	LOC105369274	A0A096LPK9	316 aa		4.38	□□□□□ -1.71
PRKDC-210	ENST00000541488	LOC102723532	A0A0G2JNH3	316 aa		4.38	□□□□□ -1.71
PRKDC-210	ENST00000541488	GXYLT2	A0PJZ3	443 aa		4.38	□□□□□ -1.71
PRKDC-210	ENST00000541488	AQP12B	A6NM10	295 aa		4.38	□□□□□ -1.71
PRKDC-210	ENST00000541488	ERVV-2	B6SEH9	535 aa		4.38	□□□□□ -1.71
PRKDC-210	ENST00000541488	NKX2-8	O15522	239 aa		4.38	□□□□□ -1.71
PRKDC-210	ENST00000541488	ALDOA	P04075	364 aa	Known RBP	4.38	□□□□□ -1.71
PRKDC-210	ENST00000541488	NGFR	P08138	427 aa		4.38	□□□□□ -1.71
PRKDC-210	ENST00000541488	GRK5	P34947	590 aa		4.38	□□□□□ -1.71
PRKDC-210	ENST00000541488	TM4SF4	P48230	202 aa		4.38	□□□□□ -1.71
PRKDC-210	ENST00000541488	RPL15	P61313	204 aa	Known RBP	4.38	□□□□□ -1.71
PRKDC-210	ENST00000541488	PMPCA	Q10713	525 aa		4.38	□□□□□ -1.71
PRKDC-210	ENST00000541488	BTBD16	Q32M84	506 aa		4.38	□□□□□ -1.71
PRKDC-210	ENST00000541488	ASPHD1	Q5U4P2	390 aa		4.38	□□□□□ -1.71
PRKDC-210	ENST00000541488	ISM2	Q6H9L7	571 aa		4.38	□□□□□ -1.71
PRKDC-210	ENST00000541488	OR4N4	Q8N0Y3	316 aa		4.38	□□□□□ -1.71
PRKDC-210	ENST00000541488	FBXL14	Q8N1E6	418 aa		4.38	□□□□□ -1.71
PRKDC-210	ENST00000541488	CLEC4C	Q8WTT0	213 aa		4.38	□□□□□ -1.71
PRKDC-210	ENST00000541488	PAAF1	Q9BRP4	392 aa		4.38	□□□□□ -1.71
PRKDC-210	ENST00000541488	WDR83	Q9BRX9	315 aa	Known RBP	4.38	□□□□□ -1.71
PRKDC-210	ENST00000541488	ERVK-5	Q9HDB9	667 aa		4.38	□□□□□ -1.71
PRKDC-210	ENST00000541488	CDC23	Q9UJX2	597 aa		4.38	□□□□□ -1.71
PRKDC-210	ENST00000541488	LMTK3	Q96Q04	1460 aa		4.37	□□□□□ -1.71
PRKDC-210	ENST00000541488	RPS10-NUDT3	A0A1W2PQS6	291 aa		4.37	□□□□□ -1.71
PRKDC-210	ENST00000541488	FOXO6	A8MYZ6	492 aa		4.37	□□□□□ -1.71
PRKDC-210	ENST00000541488	PRR23D1	E9PI22	279 aa	Predicted RBP	4.37	□□□□□ -1.71
PRKDC-210	ENST00000541488	MSI1	O43347	362 aa	Known RBP	4.37	□□□□□ -1.71
PRKDC-210	ENST00000541488	ASNA1	O43681	348 aa		4.37	□□□□□ -1.71
PRKDC-210	ENST00000541488	SGPL1	O95470	568 aa		4.37	□□□□□ -1.71
PRKDC-210	ENST00000541488	NTSR2	O95665	410 aa		4.37	□□□□□ -1.71
PRKDC-210	ENST00000541488	PRR23D2	P0DMB1	279 aa	Predicted RBP	4.37	□□□□□ -1.71
PRKDC-210	ENST00000541488	TNFRSF8	P28908	595 aa		4.37	□□□□□ -1.71
PRKDC-210	ENST00000541488	AK2	P54819	239 aa		4.37	□□□□□ -1.71
PRKDC-210	ENST00000541488	KRTAP27-1	Q3LI81	207 aa		4.37	□□□□□ -1.71
PRKDC-210	ENST00000541488	ENTPD8	Q5MY95	495 aa		4.37	□□□□□ -1.71
PRKDC-210	ENST00000541488	WASHC2D	Q5SRD0	308 aa		4.37	□□□□□ -1.71
PRKDC-210	ENST00000541488	SRL	Q86TD4	932 aa		4.37	□□□□□ -1.71
PRKDC-210	ENST00000541488	PAQR4	Q8N4S7	273 aa	Predicted RBP	4.37	□□□□□ -1.71
PRKDC-210	ENST00000541488	NEUROG1	Q92886	237 aa		4.37	□□□□□ -1.71
PRKDC-210	ENST00000541488	SORBS1	Q9BX66	1292 aa	Known RBP	4.37	□□□□□ -1.71
PRKDC-210	ENST00000541488	MAGEH1	Q9H213	219 aa		4.37	□□□□□ -1.71
PRKDC-210	ENST00000541488	SFXN1	Q9H9B4	322 aa		4.37	□□□□□ -1.71
PRKDC-210	ENST00000541488	SEPSECS	Q9HD40	501 aa	Known RBP	4.37	□□□□□ -1.71
PRKDC-210	ENST00000541488	KCNK9	Q9NPC2	374 aa		4.37	□□□□□ -1.71
PRKDC-210	ENST00000541488	SPAG4	Q9NPE6	437 aa		4.37	□□□□□ -1.71
PRKDC-210	ENST00000541488	NECTIN3	Q9NQS3	549 aa		4.37	□□□□□ -1.71
PRKDC-210	ENST00000541488	TM7SF3	Q9NS93	570 aa		4.37	□□□□□ -1.71
PRKDC-210	ENST00000541488	CA14	Q9ULX7	337 aa		4.37	□□□□□ -1.71
PRKDC-210	ENST00000541488	TBC1D3D	A0A087WVF3	549 aa		4.36	□□□□□ -1.71
PRKDC-210	ENST00000541488	TBC1D3I	A0A087WXS9	549 aa		4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms