RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 K7ESM1 405 aa9.87□□□□□ -0.83
YBX3-211ENST00000541351 WNT9AO14904 365 aa9.87□□□□□ -0.83
YBX3-211ENST00000541351 SLC7A4O43246 635 aa9.87□□□□□ -0.83
YBX3-211ENST00000541351 STC2O76061 302 aa9.87□□□□□ -0.83
YBX3-211ENST00000541351 TBX18O95935 607 aa9.87□□□□□ -0.83
YBX3-211ENST00000541351 ASLP04424 464 aa9.87□□□□□ -0.83
YBX3-211ENST00000541351 KRT18P05783 430 aaKnown RBP9.87□□□□□ -0.83
YBX3-211ENST00000541351 PLA2G4BP0C869 781 aa9.87□□□□□ -0.83
YBX3-211ENST00000541351 CORO1AP31146 461 aaKnown RBP9.87□□□□□ -0.83
YBX3-211ENST00000541351 SLC8A1P32418 973 aa9.87□□□□□ -0.83
YBX3-211ENST00000541351 CCDC15Q0P6D6 951 aa9.87□□□□□ -0.83
YBX3-211ENST00000541351 FGL2Q14314 439 aa9.87□□□□□ -0.83
YBX3-211ENST00000541351 HNRNPA1L2Q32P51 320 aaKnown RBP9.87□□□□□ -0.83
YBX3-211ENST00000541351 TMEM215Q68D42 235 aa9.87□□□□□ -0.83
YBX3-211ENST00000541351 TRIM69Q86WT6 500 aa9.87□□□□□ -0.83
YBX3-211ENST00000541351 ZNF276Q8N554 614 aa9.87□□□□□ -0.83
YBX3-211ENST00000541351 KDM1BQ8NB78 822 aa9.87□□□□□ -0.83
YBX3-211ENST00000541351 IL12RB2Q99665 862 aa9.87□□□□□ -0.83
YBX3-211ENST00000541351 FAM213AQ9BRX8 229 aa9.87□□□□□ -0.83
YBX3-211ENST00000541351 B3GNT5Q9BYG0 378 aa9.87□□□□□ -0.83
YBX3-211ENST00000541351 MTMR12Q9C0I1 747 aa9.87□□□□□ -0.83
YBX3-211ENST00000541351 B3GNT4Q9C0J1 378 aa9.87□□□□□ -0.83
YBX3-211ENST00000541351 ZHX3Q9H4I2 956 aa9.87□□□□□ -0.83
YBX3-211ENST00000541351 SYNDIG1Q9H7V2 258 aa9.87□□□□□ -0.83
YBX3-211ENST00000541351 ZSWIM6Q9HCJ5 1215 aa9.87□□□□□ -0.83
YBX3-211ENST00000541351 EPB41L5Q9HCM4 733 aa9.87□□□□□ -0.83
YBX3-211ENST00000541351 UCKL1Q9NWZ5 548 aa9.87□□□□□ -0.83
YBX3-211ENST00000541351 GGA2Q9UJY4 613 aa9.87□□□□□ -0.83
YBX3-211ENST00000541351 SCML2Q9UQR0 700 aa9.87□□□□□ -0.83
YBX3-211ENST00000541351 PCNX1Q96RV3 2341 aa9.87□□□□□ -0.83
YBX3-211ENST00000541351 MTSS1O43312 755 aa9.86□□□□□ -0.83
YBX3-211ENST00000541351 AP1G2O75843 785 aa9.86□□□□□ -0.83
YBX3-211ENST00000541351 KRT7P08729 469 aa9.86□□□□□ -0.83
YBX3-211ENST00000541351 PABPC1P11940 636 aaKnown RBP9.86□□□□□ -0.83
YBX3-211ENST00000541351 RARGP13631 454 aa9.86□□□□□ -0.83
YBX3-211ENST00000541351 GRNP28799 593 aaKnown RBP9.86□□□□□ -0.83
YBX3-211ENST00000541351 ZNF131P52739 623 aa9.86□□□□□ -0.83
YBX3-211ENST00000541351 CACNA2D1P54289 1103 aa9.86□□□□□ -0.83
YBX3-211ENST00000541351 SLC12A3P55017 1021 aa9.86□□□□□ -0.83
YBX3-211ENST00000541351 CYP4F2P78329 520 aa9.86□□□□□ -0.83
YBX3-211ENST00000541351 ARID5BQ14865 1188 aa9.86□□□□□ -0.83
YBX3-211ENST00000541351 DUOXA2Q1HG44 320 aa9.86□□□□□ -0.83
YBX3-211ENST00000541351 DCAF6Q58WW2 860 aa9.86□□□□□ -0.83
YBX3-211ENST00000541351 BMP2KLQ5H9B9 411 aa9.86□□□□□ -0.83
YBX3-211ENST00000541351 MBLAC2Q68D91 279 aa9.86□□□□□ -0.83
YBX3-211ENST00000541351 CAPRIN2Q6IMN6 1127 aaKnown RBP9.86□□□□□ -0.83
YBX3-211ENST00000541351 CRELD2Q6UXH1 353 aaPredicted RBP9.86□□□□□ -0.83
YBX3-211ENST00000541351 DTHD1Q6ZMT9 781 aa9.86□□□□□ -0.83
YBX3-211ENST00000541351 SV2AQ7L0J3 742 aa9.86□□□□□ -0.83
YBX3-211ENST00000541351 FAM35AQ86V20 835 aa9.86□□□□□ -0.83
YBX3-211ENST00000541351 VASH2Q86V25 355 aa9.86□□□□□ -0.83
YBX3-211ENST00000541351 MMAAQ8IVH4 418 aaKnown RBP9.86□□□□□ -0.83
YBX3-211ENST00000541351 CCDC117Q8IWD4 279 aaPredicted RBP9.86□□□□□ -0.83
YBX3-211ENST00000541351 FAM114A1Q8IWE2 563 aa9.86□□□□□ -0.83
YBX3-211ENST00000541351 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.86□□□□□ -0.83
YBX3-211ENST00000541351 HTR3CQ8WXA8 447 aa9.86□□□□□ -0.83
YBX3-211ENST00000541351 HAPLN3Q96S86 360 aa9.86□□□□□ -0.83
YBX3-211ENST00000541351 KCNK16Q96T55 309 aa9.86□□□□□ -0.83
YBX3-211ENST00000541351 ST6GALNAC4Q9H4F1 302 aa9.86□□□□□ -0.83
YBX3-211ENST00000541351 ZNF71Q9NQZ8 489 aaPredicted RBP9.86□□□□□ -0.83
YBX3-211ENST00000541351 ABCB8Q9NUT2 735 aa9.86□□□□□ -0.83
YBX3-211ENST00000541351 DONSONQ9NYP3 566 aa9.86□□□□□ -0.83
YBX3-211ENST00000541351 AKAP7Q9P0M2 348 aaPredicted RBP9.86□□□□□ -0.83
YBX3-211ENST00000541351 SERGEFQ9UGK8 458 aa9.86□□□□□ -0.83
YBX3-211ENST00000541351 CYTH4Q9UIA0 394 aa9.86□□□□□ -0.83
YBX3-211ENST00000541351 PCDHA5Q9Y5H7 936 aa9.86□□□□□ -0.83
YBX3-211ENST00000541351 EDDM13A0A1B0GTR0 161 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 ZNF891A8MT65 544 aaPredicted RBP9.85□□□□□ -0.83
YBX3-211ENST00000541351 ANKRD63C9JTQ0 380 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 STMND1H3BQB6 276 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 CLDN5O00501 218 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 TPP1O14773 563 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 KIAA0391O15091 583 aaKnown RBP9.85□□□□□ -0.83
YBX3-211ENST00000541351 PFKFB2O60825 505 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 CNTN5O94779 1100 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 REC8O95072 547 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 HLA-FP30511 346 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 AKT2P31751 481 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 NOS2P35228 1153 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 PSMD8P48556 350 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 HYIQ5T013 277 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 FAM46CQ5VWP2 391 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 GUSBP11Q6P575 273 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 DYMQ7RTS9 669 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 TIPARPQ7Z3E1 657 aaKnown RBP9.85□□□□□ -0.83
YBX3-211ENST00000541351 DENND1CQ8IV53 801 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 CXorf38Q8TB03 319 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 GFM1Q96RP9 751 aaKnown RBP9.85□□□□□ -0.83
YBX3-211ENST00000541351 CMKLR1Q99788 373 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 EPAS1Q99814 870 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 REEP2Q9BRK0 252 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 SLC12A9Q9BXP2 914 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 CALN1Q9BXU9 219 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 IRX2Q9BZI1 471 aaPredicted RBP9.85□□□□□ -0.83
YBX3-211ENST00000541351 TM6SF1Q9BZW5 370 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 PRDM8Q9NQV8 689 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 KRT82Q9NSB4 513 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 INTS13Q9NVM9 706 aa9.85□□□□□ -0.83
YBX3-211ENST00000541351 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.85□□□□□ -0.83
YBX3-211ENST00000541351 DNAJC28Q9NX36 388 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms