RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 DCBLD2Q96PD2 775 aa27.84■■■□□ 2.05
CHFR-218ENST00000540963 DDX50Q9BQ39 737 aaKnown RBP27.84■■■□□ 2.05
CHFR-218ENST00000540963 NRSN2Q9GZP1 204 aa27.84■■■□□ 2.05
CHFR-218ENST00000540963 MAPK8IP1Q9UQF2 711 aa27.84■■■□□ 2.05
CHFR-218ENST00000540963 ZDHHC9Q9Y397 364 aa27.84■■■□□ 2.05
CHFR-218ENST00000540963 COQ4Q9Y3A0 265 aa27.84■■■□□ 2.05
CHFR-218ENST00000540963 TARSL2A2RTX5 802 aaKnown RBP27.83■■■□□ 2.05
CHFR-218ENST00000540963 ITGAVP06756 1048 aa27.83■■■□□ 2.05
CHFR-218ENST00000540963 VDRP11473 427 aa27.83■■■□□ 2.05
CHFR-218ENST00000540963 ABCB4P21439 1286 aa27.83■■■□□ 2.05
CHFR-218ENST00000540963 CD38P28907 300 aa27.83■■■□□ 2.05
CHFR-218ENST00000540963 CCR5P51681 352 aa27.83■■■□□ 2.05
CHFR-218ENST00000540963 DAOAP59103 153 aa27.83■■■□□ 2.05
CHFR-218ENST00000540963 DPYDQ12882 1025 aa27.83■■■□□ 2.05
CHFR-218ENST00000540963 CST6Q15828 149 aa27.83■■■□□ 2.05
CHFR-218ENST00000540963 FAM133BQ5BKY9 247 aaKnown RBP27.83■■■□□ 2.05
CHFR-218ENST00000540963 NCEH1Q6PIU2 408 aa27.83■■■□□ 2.05
CHFR-218ENST00000540963 MFN1Q8IWA4 741 aa27.83■■■□□ 2.05
CHFR-218ENST00000540963 HJURPQ8NCD3 748 aaPredicted RBP27.83■■■□□ 2.05
CHFR-218ENST00000540963 CRELD1Q96HD1 420 aa27.83■■■□□ 2.05
CHFR-218ENST00000540963 GDF3Q9NR23 364 aa27.83■■■□□ 2.05
CHFR-218ENST00000540963 MYLKQ15746 1914 aa27.82■■■□□ 2.04
CHFR-218ENST00000540963 TYW5A2RUC4 315 aaKnown RBP27.82■■■□□ 2.04
CHFR-218ENST00000540963 FAM47DPA6NHR8 397 aa27.82■■■□□ 2.04
CHFR-218ENST00000540963 ACSL4O60488 711 aa27.82■■■□□ 2.04
CHFR-218ENST00000540963 SIN3BO75182 1162 aa27.82■■■□□ 2.04
CHFR-218ENST00000540963 EPB41P11171 864 aaKnown RBP27.82■■■□□ 2.04
CHFR-218ENST00000540963 EIF2S3P41091 472 aaKnown RBP27.82■■■□□ 2.04
CHFR-218ENST00000540963 ARRB1P49407 418 aaPredicted RBP27.82■■■□□ 2.04
CHFR-218ENST00000540963 CUL2Q13617 745 aa27.82■■■□□ 2.04
CHFR-218ENST00000540963 RTP5Q14D33 572 aa27.82■■■□□ 2.04
CHFR-218ENST00000540963 PKDCCQ504Y2 493 aa27.82■■■□□ 2.04
CHFR-218ENST00000540963 RFWD3Q6PCD5 774 aa27.82■■■□□ 2.04
CHFR-218ENST00000540963 LRRC69Q6ZNQ3 347 aa27.82■■■□□ 2.04
CHFR-218ENST00000540963 GATAD2AQ86YP4 633 aa27.82■■■□□ 2.04
CHFR-218ENST00000540963 TSC1Q92574 1164 aa27.82■■■□□ 2.04
CHFR-218ENST00000540963 NEUROG2Q9H2A3 272 aa27.82■■■□□ 2.04
CHFR-218ENST00000540963 GTF3C3Q9Y5Q9 886 aa27.82■■■□□ 2.04
CHFR-218ENST00000540963 FAM237AA0A1B0GTK4 181 aa27.81■■■□□ 2.04
CHFR-218ENST00000540963 O00370 1275 aa27.81■■■□□ 2.04
CHFR-218ENST00000540963 WNT1P04628 370 aa27.81■■■□□ 2.04
CHFR-218ENST00000540963 SRPRAP08240 638 aaKnown RBP27.81■■■□□ 2.04
CHFR-218ENST00000540963 SLC6A4P31645 630 aa27.81■■■□□ 2.04
CHFR-218ENST00000540963 SYKP43405 635 aa27.81■■■□□ 2.04
CHFR-218ENST00000540963 ACADVLP49748 655 aa27.81■■■□□ 2.04
CHFR-218ENST00000540963 ILKQ13418 452 aa27.81■■■□□ 2.04
CHFR-218ENST00000540963 SHBQ15464 509 aa27.81■■■□□ 2.04
CHFR-218ENST00000540963 CACTIN-AS1Q8N1I8 211 aa27.81■■■□□ 2.04
CHFR-218ENST00000540963 OXR1Q8N573 874 aa27.81■■■□□ 2.04
CHFR-218ENST00000540963 PIP4K2CQ8TBX8 421 aa27.81■■■□□ 2.04
CHFR-218ENST00000540963 ADAM32Q8TC27 787 aa27.81■■■□□ 2.04
CHFR-218ENST00000540963 MRGPRX3Q96LB0 322 aa27.81■■■□□ 2.04
CHFR-218ENST00000540963 PRORYQ9H606 182 aa27.81■■■□□ 2.04
CHFR-218ENST00000540963 ERVMER34-1Q9H9K5 563 aa27.81■■■□□ 2.04
CHFR-218ENST00000540963 EBF2Q9HAK2 575 aa27.81■■■□□ 2.04
CHFR-218ENST00000540963 SERGEFQ9UGK8 458 aa27.81■■■□□ 2.04
CHFR-218ENST00000540963 NYNRINQ9P2P1 1898 aaKnown RBP27.81■■■□□ 2.04
CHFR-218ENST00000540963 A0A1W2PR77 199 aa27.8■■■□□ 2.04
CHFR-218ENST00000540963 CETN3O15182 167 aa27.8■■■□□ 2.04
CHFR-218ENST00000540963 ATXN7O15265 892 aaPredicted RBP27.8■■■□□ 2.04
CHFR-218ENST00000540963 MID1O15344 667 aa27.8■■■□□ 2.04
CHFR-218ENST00000540963 CD19P15391 556 aa27.8■■■□□ 2.04
CHFR-218ENST00000540963 CSKP41240 450 aa27.8■■■□□ 2.04
CHFR-218ENST00000540963 SLC45A4Q5BKX6 768 aa27.8■■■□□ 2.04
CHFR-218ENST00000540963 C9orf64Q5T6V5 341 aa27.8■■■□□ 2.04
CHFR-218ENST00000540963 UBA3Q8TBC4 463 aa27.8■■■□□ 2.04
CHFR-218ENST00000540963 OMDQ99983 421 aa27.8■■■□□ 2.04
CHFR-218ENST00000540963 MTG2Q9H4K7 406 aa27.8■■■□□ 2.04
CHFR-218ENST00000540963 AASDHPPTQ9NRN7 309 aa27.8■■■□□ 2.04
CHFR-218ENST00000540963 ITIH6Q6UXX5 1313 aa27.8■■■□□ 2.04
CHFR-218ENST00000540963 KALRNO60229 2985 aa27.79■■■□□ 2.04
CHFR-218ENST00000540963 A0A1W2PP55 124 aa27.79■■■□□ 2.04
CHFR-218ENST00000540963 RRP8O43159 456 aaKnown RBP27.79■■■□□ 2.04
CHFR-218ENST00000540963 PRR29P0C7W0 189 aa27.79■■■□□ 2.04
CHFR-218ENST00000540963 EPHA8P29322 1005 aaPredicted RBP27.79■■■□□ 2.04
CHFR-218ENST00000540963 RXRGP48443 463 aa27.79■■■□□ 2.04
CHFR-218ENST00000540963 TBX4P57082 545 aa27.79■■■□□ 2.04
CHFR-218ENST00000540963 KCNJ12Q14500 433 aa27.79■■■□□ 2.04
CHFR-218ENST00000540963 FBXL19Q6PCT2 694 aa27.79■■■□□ 2.04
CHFR-218ENST00000540963 LCLAT1Q6UWP7 414 aa27.79■■■□□ 2.04
CHFR-218ENST00000540963 CCDC117Q8IWD4 279 aaPredicted RBP27.79■■■□□ 2.04
CHFR-218ENST00000540963 SLC35F5Q8WV83 523 aa27.79■■■□□ 2.04
CHFR-218ENST00000540963 SLC39A7Q92504 469 aa27.79■■■□□ 2.04
CHFR-218ENST00000540963 INTS6Q9UL03 887 aaKnown RBP27.79■■■□□ 2.04
CHFR-218ENST00000540963 SETXQ7Z333 2677 aaKnown RBP27.79■■■□□ 2.04
CHFR-218ENST00000540963 PTPRQQ9UMZ3 2332 aa27.78■■■□□ 2.04
CHFR-218ENST00000540963 ARID1BQ8NFD5 2236 aaPredicted RBP27.78■■■□□ 2.04
CHFR-218ENST00000540963 EDDM13A0A1B0GTR0 161 aa27.78■■■□□ 2.04
CHFR-218ENST00000540963 GOLGA6L7A0A1B0GV03 622 aa27.78■■■□□ 2.04
CHFR-218ENST00000540963 RNASEH2AO75792 299 aaKnown RBP27.78■■■□□ 2.04
CHFR-218ENST00000540963 TBXAS1P24557 533 aaPredicted RBP27.78■■■□□ 2.04
CHFR-218ENST00000540963 SLC8A1P32418 973 aa27.78■■■□□ 2.04
CHFR-218ENST00000540963 NNTQ13423 1086 aa27.78■■■□□ 2.04
CHFR-218ENST00000540963 SND1Q7KZF4 910 aaKnown RBP eCLIP27.78■■■□□ 2.04
CHFR-218ENST00000540963 MMAAQ8IVH4 418 aaKnown RBP27.78■■■□□ 2.04
CHFR-218ENST00000540963 DHX40Q8IX18 779 aaKnown RBP27.78■■■□□ 2.04
CHFR-218ENST00000540963 SNIP1Q8TAD8 396 aaKnown RBP27.78■■■□□ 2.04
CHFR-218ENST00000540963 BAP1Q92560 729 aa27.78■■■□□ 2.04
CHFR-218ENST00000540963 EEF2KMTQ96G04 330 aa27.78■■■□□ 2.04
CHFR-218ENST00000540963 PRICKLE1Q96MT3 831 aaPredicted RBP27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms