RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 RNF8O76064 485 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 ENDOD1O94919 500 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 TRUB2O95900 331 aaKnown RBP10.96□□□□□ -0.65
ATL3-204ENST00000540699 KRT7P08729 469 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 IRF1P10914 325 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 ARSAP15289 507 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 TFE3P19532 575 aaPredicted RBP10.96□□□□□ -0.65
ATL3-204ENST00000540699 IFNAR2P48551 515 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 ARSEP51690 589 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 CLCN5P51795 746 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 PITX1P78337 314 aaPredicted RBP10.96□□□□□ -0.65
ATL3-204ENST00000540699 PRKCQQ04759 706 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 KLF1Q13351 362 aaPredicted RBP10.96□□□□□ -0.65
ATL3-204ENST00000540699 RUNX3Q13761 415 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 TAZQ16635 292 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 HADHQ16836 314 aaKnown RBP10.96□□□□□ -0.65
ATL3-204ENST00000540699 LONRF2Q1L5Z9 754 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 ITPRIPL2Q3MIP1 535 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 SLC25A52Q3SY17 297 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 SLC44A4Q53GD3 710 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 DCAF6Q58WW2 860 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 TRIM68Q6AZZ1 485 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 STRADAQ7RTN6 431 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 BBS7Q8IWZ6 715 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 ADGRG2Q8IZP9 1017 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 GPR161Q8N6U8 529 aaKnown RBP10.96□□□□□ -0.65
ATL3-204ENST00000540699 FAM172AQ8WUF8 416 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 RAPGEF5Q92565 580 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 MSANTD3Q96H12 275 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 RBM41Q96IZ5 413 aaKnown RBP10.96□□□□□ -0.65
ATL3-204ENST00000540699 FCRL2Q96LA5 508 aaPredicted RBP10.96□□□□□ -0.65
ATL3-204ENST00000540699 LINC00597Q9H2U6 94 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 ARHGEF3Q9NR81 526 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 GTSE1Q9NYZ3 720 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 LSM7Q9UK45 103 aaKnown RBP10.96□□□□□ -0.65
ATL3-204ENST00000540699 USP18Q9UMW8 372 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 SH3BP1Q9Y3L3 701 aa10.96□□□□□ -0.65
ATL3-204ENST00000540699 KRIT1O00522 736 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 ZRANB2O95218 330 aaKnown RBP eCLIP10.95□□□□□ -0.66
ATL3-204ENST00000540699 NFATC1O95644 943 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 KRT1P04264 644 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 CYP17A1P05093 508 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 RARAP10276 462 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 CORO1AP31146 461 aaKnown RBP10.95□□□□□ -0.66
ATL3-204ENST00000540699 GJC1P36383 396 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 NBL1P41271 181 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 SSR1P43307 286 aaKnown RBP10.95□□□□□ -0.66
ATL3-204ENST00000540699 TBX4P57082 545 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 STARD6P59095 220 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 COPS2P61201 443 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 ATP11AP98196 1134 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 TNK2Q07912 1038 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 MLF2Q15773 248 aaPredicted RBP10.95□□□□□ -0.66
ATL3-204ENST00000540699 PPP2R5EQ16537 467 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 CYP1B1Q16678 543 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 CDO1Q16878 200 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 GAB4Q2WGN9 574 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 NUGGCQ68CJ6 796 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 C1orf228Q6PIY5 440 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 MFSD7Q6UXD7 560 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 SPOCD1Q6ZMY3 1216 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 ASCL5Q7RTU5 278 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 ERMP1Q7Z2K6 904 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 UNC45BQ8IWX7 931 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 RCOR2Q8IZ40 523 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 CPXM2Q8N436 756 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 CPA6Q8N4T0 437 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 PRELID2Q8N945 189 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 C12orf50Q8NA57 414 aaPredicted RBP10.95□□□□□ -0.66
ATL3-204ENST00000540699 FLCNQ8NFG4 579 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 FAM71BQ8TC56 605 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 TEKT4Q8WW24 435 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 ANKRD7Q92527 254 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 CHFRQ96EP1 664 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 TBCBQ99426 244 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 AP1M1Q9BXS5 423 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 EPC1Q9H2F5 836 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 EBF3Q9H4W6 596 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 C8orf33Q9H7E9 229 aaPredicted RBP10.95□□□□□ -0.66
ATL3-204ENST00000540699 ECT2Q9H8V3 914 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 HEBP1Q9NRV9 189 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 KLHL11Q9NVR0 708 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 MARK1Q9P0L2 795 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 CALCOCO1Q9P1Z2 691 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 PCSK1NQ9UHG2 260 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 AGO1Q9UL18 857 aaKnown RBP10.95□□□□□ -0.66
ATL3-204ENST00000540699 STAP1Q9ULZ2 295 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 MYO18AQ92614 2054 aaKnown RBP10.95□□□□□ -0.66
ATL3-204ENST00000540699 FANCMQ8IYD8 2048 aa10.95□□□□□ -0.66
ATL3-204ENST00000540699 hCG_1818297A0A087WSY0 165 aa10.94□□□□□ -0.66
ATL3-204ENST00000540699 TARSL2A2RTX5 802 aaKnown RBP10.94□□□□□ -0.66
ATL3-204ENST00000540699 KCNU1A8MYU2 1149 aa10.94□□□□□ -0.66
ATL3-204ENST00000540699 BHMG1C9JSJ3 638 aaPredicted RBP10.94□□□□□ -0.66
ATL3-204ENST00000540699 SCAMP3O14828 347 aaKnown RBP10.94□□□□□ -0.66
ATL3-204ENST00000540699 HOXC11O43248 304 aaPredicted RBP10.94□□□□□ -0.66
ATL3-204ENST00000540699 F9P00740 461 aa10.94□□□□□ -0.66
ATL3-204ENST00000540699 HMBSP08397 361 aa10.94□□□□□ -0.66
ATL3-204ENST00000540699 AOC1P19801 751 aa10.94□□□□□ -0.66
ATL3-204ENST00000540699 CTHP32929 405 aa10.94□□□□□ -0.66
ATL3-204ENST00000540699 CDKN2BP42772 138 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms