RNA–Protein interactions for RNA: ENST00000540438.5

USP28-208, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 3,015 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-208ENST00000540438 ARHGAP17Q68EM7 881 aa17.37■□□□□ 0.37
USP28-208ENST00000540438 UNC93AQ86WB7 457 aa17.37■□□□□ 0.37
USP28-208ENST00000540438 B3GALT6Q96L58 329 aa17.37■□□□□ 0.37
USP28-208ENST00000540438 NDFIP2Q9NV92 336 aa17.37■□□□□ 0.37
USP28-208ENST00000540438 TMEM216Q9P0N5 145 aa17.37■□□□□ 0.37
USP28-208ENST00000540438 USP3Q9Y6I4 520 aa17.37■□□□□ 0.37
USP28-208ENST00000540438 COL1A2P08123 1366 aa17.37■□□□□ 0.37
USP28-208ENST00000540438 C2CD2LO14523 706 aa17.37■□□□□ 0.37
USP28-208ENST00000540438 TNPO2O14787 897 aaKnown RBP17.37■□□□□ 0.37
USP28-208ENST00000540438 KRT36O76013 467 aa17.37■□□□□ 0.37
USP28-208ENST00000540438 KRT38O76015 456 aa17.37■□□□□ 0.37
USP28-208ENST00000540438 TYK2P29597 1187 aa17.37■□□□□ 0.37
USP28-208ENST00000540438 THPOP40225 353 aa17.37■□□□□ 0.37
USP28-208ENST00000540438 SLC18A2Q05940 514 aa17.37■□□□□ 0.37
USP28-208ENST00000540438 EFHC1Q5JVL4 640 aa17.37■□□□□ 0.37
USP28-208ENST00000540438 C10orf107Q8IVU9 208 aa17.37■□□□□ 0.37
USP28-208ENST00000540438 TTC16Q8NEE8 873 aa17.37■□□□□ 0.37
USP28-208ENST00000540438 MCUR1Q96AQ8 359 aa17.37■□□□□ 0.37
USP28-208ENST00000540438 ZNF570Q96NI8 536 aa17.37■□□□□ 0.37
USP28-208ENST00000540438 TXNDC16Q9P2K2 825 aa17.37■□□□□ 0.37
USP28-208ENST00000540438 DCAF8L1A6NGE4 600 aa17.36■□□□□ 0.37
USP28-208ENST00000540438 ARL5CA6NH57 179 aa17.36■□□□□ 0.37
USP28-208ENST00000540438 B2RBV5 119 aa17.36■□□□□ 0.37
USP28-208ENST00000540438 CCL22O00626 93 aa17.36■□□□□ 0.37
USP28-208ENST00000540438 CENPIQ92674 756 aaPredicted RBP17.36■□□□□ 0.37
USP28-208ENST00000540438 CYP4F11Q9HBI6 524 aa17.36■□□□□ 0.37
USP28-208ENST00000540438 MORF4L1Q9UBU8 362 aa17.36■□□□□ 0.37
USP28-208ENST00000540438 DNAJC16Q9Y2G8 782 aa17.36■□□□□ 0.37
USP28-208ENST00000540438 GOLGA8QA0A0J9YX86 632 aa17.36■□□□□ 0.37
USP28-208ENST00000540438 GOLGA8OA6NCC3 632 aa17.36■□□□□ 0.37
USP28-208ENST00000540438 PRR5-ARHGAP8B1AHC4 643 aa17.36■□□□□ 0.37
USP28-208ENST00000540438 GOLGA8NF8WBI6 632 aa17.36■□□□□ 0.37
USP28-208ENST00000540438 MGEA5O60502 916 aa17.36■□□□□ 0.37
USP28-208ENST00000540438 GCATO75600 419 aa17.36■□□□□ 0.37
USP28-208ENST00000540438 SOAT2O75908 522 aa17.36■□□□□ 0.37
USP28-208ENST00000540438 NFKB1P19838 968 aa17.36■□□□□ 0.37
USP28-208ENST00000540438 ADRA1BP35368 520 aa17.36■□□□□ 0.37
USP28-208ENST00000540438 ARHGAP8P85298 464 aa17.36■□□□□ 0.37
USP28-208ENST00000540438 ZNF280DQ6N043 979 aa17.36■□□□□ 0.37
USP28-208ENST00000540438 FAM35AQ86V20 835 aa17.36■□□□□ 0.37
USP28-208ENST00000540438 TRPV1Q8NER1 839 aa17.36■□□□□ 0.37
USP28-208ENST00000540438 SGF29Q96ES7 293 aa17.36■□□□□ 0.37
USP28-208ENST00000540438 FRMD8P1Q9BZ68 369 aaPredicted RBP17.36■□□□□ 0.37
USP28-208ENST00000540438 NMRK2Q9NPI5 230 aa17.36■□□□□ 0.37
USP28-208ENST00000540438 FAM105AQ9NUU6 356 aa17.36■□□□□ 0.37
USP28-208ENST00000540438 TAS2R1Q9NYW7 299 aa17.36■□□□□ 0.37
USP28-208ENST00000540438 PCDHA11Q9Y5I1 949 aa17.36■□□□□ 0.37
USP28-208ENST00000540438 MBLAC1A4D2B0 266 aaPredicted RBP17.35■□□□□ 0.37
USP28-208ENST00000540438 SDR42E2A6NKP2 422 aa17.35■□□□□ 0.37
USP28-208ENST00000540438 C9IYK1 514 aa17.35■□□□□ 0.37
USP28-208ENST00000540438 XPO1O14980 1071 aaKnown RBP17.35■□□□□ 0.37
USP28-208ENST00000540438 ATXN3P54252 364 aaPredicted RBP17.35■□□□□ 0.37
USP28-208ENST00000540438 GJA9P57773 515 aa17.35■□□□□ 0.37
USP28-208ENST00000540438 ITGA9Q13797 1035 aa17.35■□□□□ 0.37
USP28-208ENST00000540438 SWT1Q5T5J6 900 aaKnown RBP17.35■□□□□ 0.37
USP28-208ENST00000540438 PACS1Q6VY07 963 aa17.35■□□□□ 0.37
USP28-208ENST00000540438 CCDC91Q7Z6B0 441 aa17.35■□□□□ 0.37
USP28-208ENST00000540438 LRRTM3Q86VH5 581 aa17.35■□□□□ 0.37
USP28-208ENST00000540438 SCN4BQ8IWT1 228 aa17.35■□□□□ 0.37
USP28-208ENST00000540438 MPP6Q9NZW5 540 aa17.35■□□□□ 0.37
USP28-208ENST00000540438 OR12D3Q9UGF7 316 aa17.35■□□□□ 0.37
USP28-208ENST00000540438 PHGDHO43175 533 aaKnown RBP17.35■□□□□ 0.37
USP28-208ENST00000540438 ALADP13716 330 aa17.35■□□□□ 0.37
USP28-208ENST00000540438 SLC8A1P32418 973 aa17.35■□□□□ 0.37
USP28-208ENST00000540438 POU6F1Q14863 301 aa17.35■□□□□ 0.37
USP28-208ENST00000540438 KYAT1Q16773 422 aa17.35■□□□□ 0.37
USP28-208ENST00000540438 ISLR2Q6UXK2 745 aa17.35■□□□□ 0.37
USP28-208ENST00000540438 FAM136AQ96C01 138 aa17.35■□□□□ 0.37
USP28-208ENST00000540438 CCDC124Q96CT7 223 aaKnown RBP17.35■□□□□ 0.37
USP28-208ENST00000540438 MAF1Q9H063 256 aa17.35■□□□□ 0.37
USP28-208ENST00000540438 FIS1Q9Y3D6 152 aa17.35■□□□□ 0.37
USP28-208ENST00000540438 NEMP1O14524 444 aa17.34■□□□□ 0.37
USP28-208ENST00000540438 PEX11AO75192 247 aa17.34■□□□□ 0.37
USP28-208ENST00000540438 DGKIO75912 1065 aa17.34■□□□□ 0.37
USP28-208ENST00000540438 CHRNA1P02708 482 aa17.34■□□□□ 0.37
USP28-208ENST00000540438 THP07101 528 aa17.34■□□□□ 0.37
USP28-208ENST00000540438 DHRS4L1P0CG22 281 aa17.34■□□□□ 0.37
USP28-208ENST00000540438 PRKCHP24723 683 aa17.34■□□□□ 0.37
USP28-208ENST00000540438 ARPP19P56211 112 aa17.34■□□□□ 0.37
USP28-208ENST00000540438 PCSK7Q16549 785 aa17.34■□□□□ 0.37
USP28-208ENST00000540438 ANKRD23Q86SG2 305 aa17.34■□□□□ 0.37
USP28-208ENST00000540438 FAM161BQ96MY7 647 aa17.34■□□□□ 0.37
USP28-208ENST00000540438 NPY6RQ99463 290 aa17.34■□□□□ 0.37
USP28-208ENST00000540438 LRMDAQ9H2I8 198 aa17.34■□□□□ 0.37
USP28-208ENST00000540438 MCM8Q9UJA3 840 aa17.34■□□□□ 0.37
USP28-208ENST00000540438 EMCNQ9ULC0 261 aa17.34■□□□□ 0.37
USP28-208ENST00000540438 SETSIPP0DME0 302 aa17.34■□□□□ 0.37
USP28-208ENST00000540438 ARSAP15289 507 aa17.34■□□□□ 0.37
USP28-208ENST00000540438 CDK16Q00536 496 aa17.34■□□□□ 0.37
USP28-208ENST00000540438 STX3Q13277 289 aa17.34■□□□□ 0.37
USP28-208ENST00000540438 LRRC36Q1X8D7 754 aa17.34■□□□□ 0.37
USP28-208ENST00000540438 AGMOQ6ZNB7 445 aa17.34■□□□□ 0.37
USP28-208ENST00000540438 STRA8Q7Z7C7 330 aa17.34■□□□□ 0.37
USP28-208ENST00000540438 MYLPFQ96A32 169 aa17.34■□□□□ 0.37
USP28-208ENST00000540438 PLCD4Q9BRC7 762 aa17.34■□□□□ 0.37
USP28-208ENST00000540438 THTPAQ9BU02 230 aa17.34■□□□□ 0.37
USP28-208ENST00000540438 WDCPQ9H6R7 721 aa17.34■□□□□ 0.37
USP28-208ENST00000540438 IARS2Q9NSE4 1012 aaKnown RBP17.34■□□□□ 0.37
USP28-208ENST00000540438 GABRQQ9UN88 632 aa17.34■□□□□ 0.37
USP28-208ENST00000540438 C15orf41Q9Y2V0 281 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms