RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 ILVBLA1L0T0 632 aa9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 MANSC4A6NHS7 340 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 FAM86B1E9PN63 330 aa9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 MSI1O43347 362 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 MARCH6O60337 910 aa9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 MTA2O94776 668 aa9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 ATP5BP06576 529 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 FAM86B2P0C5J1 330 aa9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 ZNF182P17025 639 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 KLRC2P26717 231 aa9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 RPL10P27635 214 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 EPHA3P29320 983 aa9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 GPX6P59796 221 aa9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 EIF3EP60228 445 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 TRAF2Q12933 501 aa9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 ECM1Q16610 540 aa9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 NRF1Q16656 503 aa9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 CEP78Q5JTW2 689 aa9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 CES4AQ5XG92 561 aa9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 TMEM26Q6ZUK4 368 aa9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 UBE2Q1Q7Z7E8 422 aa9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 ACDQ96AP0 544 aa9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 C17orf80Q9BSJ5 609 aa9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 IRF2BPLQ9H1B7 796 aa9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 SMARCAD1Q9H4L7 1026 aa9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 MOV10Q9HCE1 1003 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 CCDC177Q9NQR7 707 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 BCAP29Q9UHQ4 241 aa9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 PACSIN3Q9UKS6 424 aa9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 SLC45A1Q9Y2W3 748 aa9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 AP4S1Q9Y587 144 aa9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 ST14Q9Y5Y6 855 aa9.71□□□□□ -0.86
CTNNA1-243ENST00000540387 GTPBP10A4D1E9 387 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 SNAP91O60641 907 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 JRKO75564 520 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 MT-ND3P03897 115 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 ERBB2P04626 1255 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 CAPNS1P04632 268 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 ALOX5P09917 674 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 ZNF26P17031 533 aaPredicted RBP9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 DCKP27707 260 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 POLR2BP30876 1174 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 GNL1P36915 607 aaPredicted RBP9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 ETV3P41162 512 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 SLC1A1P43005 524 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 KRT6CP48668 564 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 CASP4P49662 377 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 THOP1P52888 689 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 TMPRSS15P98073 1019 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 EIF2B5Q13144 721 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 PEX6Q13608 980 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 DGKDQ16760 1214 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 TKFCQ3LXA3 575 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 ZNF746Q6NUN9 644 aaPredicted RBP9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 TRIM72Q6ZMU5 477 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 CHST13Q8NET6 341 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 ZNF564Q8TBZ8 553 aaPredicted RBP9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 APOPT1Q96IL0 206 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 KCNK16Q96T55 309 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 RMDN3Q96TC7 470 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 ZBED2Q9BTP6 218 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 DHRS4Q9BTZ2 278 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 MECRQ9BV79 373 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 NAA50Q9GZZ1 169 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 PORCNQ9H237 461 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 MAP3K20Q9NYL2 800 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 DNMT3BQ9UBC3 853 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 TRAF6Q9Y4K3 522 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 TRPM7Q96QT4 1865 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 PARP14Q460N5 1801 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 LOC285556D6RIA3 1793 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 A0A087WXM4 84 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 TRIM64BA6NI03 449 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 BANF1O75531 89 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 ZNF76P36508 570 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 GRM5P41594 1212 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 FXR2P51116 673 aaKnown RBP eCLIP9.7□□□□□ -0.863e-10■■■■■ 41
CTNNA1-243ENST00000540387 CDK18Q07002 472 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 TFDP1Q14186 410 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 ARHGAP44Q17R89 818 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 PGS1Q32NB8 556 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 PRR16Q569H4 304 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 PPP6R3Q5H9R7 873 aaPredicted RBP9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 WDR78Q5VTH9 848 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 KRT79Q5XKE5 535 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 BTLAQ7Z6A9 289 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 RALGPS2Q86X27 583 aaPredicted RBP9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 IL31RAQ8NI17 732 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 DCAKDQ8WVC6 231 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 KBTBD7Q8WVZ9 684 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 MTMR9Q96QG7 549 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 TCF12Q99081 682 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 TMEM79Q9BSE2 394 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 BMP2KQ9NSY1 1161 aaPredicted RBP9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 SEPT3Q9UH03 358 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 CLUHO75153 1309 aa9.7□□□□□ -0.86
CTNNA1-243ENST00000540387 CYP3A7-CYP3A51PA0A087WV96 503 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 CCDC195A0A1B0GUA6 201 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 DENND3A2RUS2 1198 aa9.69□□□□□ -0.86
CTNNA1-243ENST00000540387 DNALI1O14645 258 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms