RNA–Protein interactions for RNA: ENST00000540209.5

RAP1B-221, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-221ENST00000540209 CD6P30203 668 aa20.05■□□□□ 0.8
RAP1B-221ENST00000540209 NOS2P35228 1153 aa20.05■□□□□ 0.8
RAP1B-221ENST00000540209 TPMTP51580 245 aa20.05■□□□□ 0.8
RAP1B-221ENST00000540209 TRIM61Q5EBN2 209 aa20.05■□□□□ 0.8
RAP1B-221ENST00000540209 OTUD1Q5VV17 481 aaPredicted RBP20.05■□□□□ 0.8
RAP1B-221ENST00000540209 TAF3Q5VWG9 929 aa20.05■□□□□ 0.8
RAP1B-221ENST00000540209 DEFB119Q8N690 84 aa20.05■□□□□ 0.8
RAP1B-221ENST00000540209 ZNF366Q8N895 744 aa20.05■□□□□ 0.8
RAP1B-221ENST00000540209 OR2T3Q8NH03 318 aa20.05■□□□□ 0.8
RAP1B-221ENST00000540209 PRCCQ92733 491 aaPredicted RBP20.05■□□□□ 0.8
RAP1B-221ENST00000540209 ZNF419Q96HQ0 510 aaPredicted RBP20.05■□□□□ 0.8
RAP1B-221ENST00000540209 HSPA12BQ96MM6 686 aa20.05■□□□□ 0.8
RAP1B-221ENST00000540209 PDCL3Q9H2J4 239 aa20.05■□□□□ 0.8
RAP1B-221ENST00000540209 WSB2Q9NYS7 404 aaPredicted RBP20.05■□□□□ 0.8
RAP1B-221ENST00000540209 LIMA1Q9UHB6 759 aaKnown RBP20.05■□□□□ 0.8
RAP1B-221ENST00000540209 SIK3Q9Y2K2 1263 aa20.05■□□□□ 0.8
RAP1B-221ENST00000540209 SYNJ2BP-COX16A0A087WUM0 186 aa20.04■□□□□ 0.8
RAP1B-221ENST00000540209 F5H5T6 163 aa20.04■□□□□ 0.8
RAP1B-221ENST00000540209 EPHB6O15197 1021 aa20.04■□□□□ 0.8
RAP1B-221ENST00000540209 NDUFS2O75306 463 aa20.04■□□□□ 0.8
RAP1B-221ENST00000540209 ABCB4P21439 1286 aa20.04■□□□□ 0.8
RAP1B-221ENST00000540209 SCNN1AP37088 669 aa20.04■□□□□ 0.8
RAP1B-221ENST00000540209 CSKP41240 450 aa20.04■□□□□ 0.8
RAP1B-221ENST00000540209 MATKP42679 507 aa20.04■□□□□ 0.8
RAP1B-221ENST00000540209 COPB1P53618 953 aaKnown RBP20.04■□□□□ 0.8
RAP1B-221ENST00000540209 JAM2P57087 298 aa20.04■□□□□ 0.8
RAP1B-221ENST00000540209 PPM1JQ5JR12 505 aa20.04■□□□□ 0.8
RAP1B-221ENST00000540209 FKBP15Q5T1M5 1219 aa20.04■□□□□ 0.8
RAP1B-221ENST00000540209 SLC23A3Q6PIS1 610 aa20.04■□□□□ 0.8
RAP1B-221ENST00000540209 MMS22LQ6ZRQ5 1243 aa20.04■□□□□ 0.8
RAP1B-221ENST00000540209 NT5C3BQ969T7 300 aa20.04■□□□□ 0.8
RAP1B-221ENST00000540209 TOE1Q96GM8 510 aaKnown RBP20.04■□□□□ 0.8
RAP1B-221ENST00000540209 NPY6RQ99463 290 aa20.04■□□□□ 0.8
RAP1B-221ENST00000540209 ADAM33Q9BZ11 813 aa20.04■□□□□ 0.8
RAP1B-221ENST00000540209 HSD3B7Q9H2F3 369 aa20.04■□□□□ 0.8
RAP1B-221ENST00000540209 FAM207AQ9NSI2 230 aaPredicted RBP20.04■□□□□ 0.8
RAP1B-221ENST00000540209 RRN3Q9NYV6 651 aa20.04■□□□□ 0.8
RAP1B-221ENST00000540209 COX16Q9P0S2 106 aa20.04■□□□□ 0.8
RAP1B-221ENST00000540209 SLC12A6Q9UHW9 1150 aa20.04■□□□□ 0.8
RAP1B-221ENST00000540209 NOCTQ9UK39 431 aaKnown RBP20.04■□□□□ 0.8
RAP1B-221ENST00000540209 DAAM1Q9Y4D1 1078 aa20.04■□□□□ 0.8
RAP1B-221ENST00000540209 H0Y626 953 aa20.03■□□□□ 0.8
RAP1B-221ENST00000540209 CDX4O14627 284 aaPredicted RBP20.03■□□□□ 0.8
RAP1B-221ENST00000540209 ASLP04424 464 aa20.03■□□□□ 0.8
RAP1B-221ENST00000540209 MMEP08473 750 aa20.03■□□□□ 0.8
RAP1B-221ENST00000540209 ZNF18P17022 549 aa20.03■□□□□ 0.8
RAP1B-221ENST00000540209 POLR2FP61218 127 aaKnown RBP20.03■□□□□ 0.8
RAP1B-221ENST00000540209 NOMO3P69849 1222 aa20.03■□□□□ 0.8
RAP1B-221ENST00000540209 NME3Q13232 169 aa20.03■□□□□ 0.8
RAP1B-221ENST00000540209 NCAPHQ15003 741 aa20.03■□□□□ 0.8
RAP1B-221ENST00000540209 PITRM1Q5JRX3 1037 aa20.03■□□□□ 0.8
RAP1B-221ENST00000540209 TTC39BQ5VTQ0 682 aaPredicted RBP20.03■□□□□ 0.8
RAP1B-221ENST00000540209 ERICH1Q86X53 443 aa20.03■□□□□ 0.8
RAP1B-221ENST00000540209 ZNF677Q86XU0 584 aa20.03■□□□□ 0.8
RAP1B-221ENST00000540209 CACUL1Q86Y37 369 aa20.03■□□□□ 0.8
RAP1B-221ENST00000540209 XYLT1Q86Y38 959 aa20.03■□□□□ 0.8
RAP1B-221ENST00000540209 CCDC117Q8IWD4 279 aaPredicted RBP20.03■□□□□ 0.8
RAP1B-221ENST00000540209 RNF34Q969K3 372 aa20.03■□□□□ 0.8
RAP1B-221ENST00000540209 C18orf8Q96DM3 657 aa20.03■□□□□ 0.8
RAP1B-221ENST00000540209 MRGPRX3Q96LB0 322 aa20.03■□□□□ 0.8
RAP1B-221ENST00000540209 NUSAP1Q9BXS6 441 aaKnown RBP20.03■□□□□ 0.8
RAP1B-221ENST00000540209 FBRSQ9HAH7 460 aa20.03■□□□□ 0.8
RAP1B-221ENST00000540209 PRSS16Q9NQE7 514 aa20.03■□□□□ 0.8
RAP1B-221ENST00000540209 TMEM63CQ9P1W3 806 aa20.03■□□□□ 0.8
RAP1B-221ENST00000540209 CACNA1EQ15878 2313 aa20.02■□□□□ 0.8
RAP1B-221ENST00000540209 LRRC10BA6NIK2 292 aa20.02■□□□□ 0.8
RAP1B-221ENST00000540209 C4orf47A7E2U8 309 aa20.02■□□□□ 0.8
RAP1B-221ENST00000540209 LGALS16A8MUM7 142 aa20.02■□□□□ 0.8
RAP1B-221ENST00000540209 M0QYT0 321 aa20.02■□□□□ 0.8
RAP1B-221ENST00000540209 GFPT2O94808 682 aa20.02■□□□□ 0.8
RAP1B-221ENST00000540209 ACADMP11310 421 aa20.02■□□□□ 0.8
RAP1B-221ENST00000540209 TFE3P19532 575 aaPredicted RBP20.02■□□□□ 0.8
RAP1B-221ENST00000540209 MTA1Q13330 715 aa20.02■□□□□ 0.8
RAP1B-221ENST00000540209 DUOXA1Q1HG43 343 aa20.02■□□□□ 0.8
RAP1B-221ENST00000540209 APTXQ7Z2E3 356 aaKnown RBP20.02■□□□□ 0.8
RAP1B-221ENST00000540209 RABEPKQ7Z6M1 372 aa20.02■□□□□ 0.8
RAP1B-221ENST00000540209 CCAR2Q8N163 923 aaKnown RBP20.02■□□□□ 0.8
RAP1B-221ENST00000540209 KDM1BQ8NB78 822 aa20.02■□□□□ 0.8
RAP1B-221ENST00000540209 CEP76Q8TAP6 659 aa20.02■□□□□ 0.8
RAP1B-221ENST00000540209 FOXJ1Q92949 421 aa20.02■□□□□ 0.8
RAP1B-221ENST00000540209 PGAP3Q96FM1 320 aaPredicted RBP20.02■□□□□ 0.8
RAP1B-221ENST00000540209 TMEM9BQ9NQ34 198 aa20.02■□□□□ 0.8
RAP1B-221ENST00000540209 PIGVQ9NUD9 493 aa20.02■□□□□ 0.8
RAP1B-221ENST00000540209 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.02■□□□□ 0.8
RAP1B-221ENST00000540209 KIAA1522Q9P206 1035 aaPredicted RBP20.02■□□□□ 0.8
RAP1B-221ENST00000540209 A0A1B0GVM2 712 aa20.01■□□□□ 0.79
RAP1B-221ENST00000540209 FAM170AA1A519 330 aa20.01■□□□□ 0.79
RAP1B-221ENST00000540209 TCAF2A6NFQ2 919 aa20.01■□□□□ 0.79
RAP1B-221ENST00000540209 OXTRP30559 389 aa20.01■□□□□ 0.79
RAP1B-221ENST00000540209 SOX5P35711 763 aa20.01■□□□□ 0.79
RAP1B-221ENST00000540209 TYRO3Q06418 890 aa20.01■□□□□ 0.79
RAP1B-221ENST00000540209 AUHQ13825 339 aaKnown RBP20.01■□□□□ 0.79
RAP1B-221ENST00000540209 ARID5BQ14865 1188 aa20.01■□□□□ 0.79
RAP1B-221ENST00000540209 NUMA1Q14980 2115 aa20.01■□□□□ 0.79
RAP1B-221ENST00000540209 SYCP1Q15431 976 aa20.01■□□□□ 0.79
RAP1B-221ENST00000540209 PLEKHG6Q3KR16 790 aa20.01■□□□□ 0.79
RAP1B-221ENST00000540209 C2CD6Q53TS8 623 aa20.01■□□□□ 0.79
RAP1B-221ENST00000540209 RABGAP1LQ5R372 815 aa20.01■□□□□ 0.79
RAP1B-221ENST00000540209 FAM102AQ5T9C2 384 aaPredicted RBP20.01■□□□□ 0.79
RAP1B-221ENST00000540209 FBXL22Q6P050 247 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms