RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 PRKCEQ02156 737 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 SLC10A2Q12908 348 aaPredicted RBP19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 PRKG1Q13976 671 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 C16orf72Q14CZ0 275 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 EMC2Q15006 297 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 CCDC153Q494R4 210 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 PPM1LQ5SGD2 360 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 SMYD5Q6GMV2 418 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 NCCRP1Q6ZVX7 275 aaPredicted RBP19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 CARM1Q86X55 608 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 DEPTORQ8TB45 409 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 OXCT2Q9BYC2 517 aaPredicted RBP19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 H3BNH8 94 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 NOP56O00567 594 aaKnown RBP19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 XPO1O14980 1071 aaKnown RBP19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 SLC22A2O15244 555 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 RNASEH2AO75792 299 aaKnown RBP19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 CD1EP15812 388 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 EPHA3P29320 983 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 ASPAP45381 313 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 NAB1Q13506 487 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 MGAT5BQ3V5L5 792 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 PQLC3Q8N755 202 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 TTLL6Q8N841 843 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 ZNF512Q96ME7 567 aaPredicted RBP19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 KLHL32Q96NJ5 620 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 RMDN3Q96TC7 470 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 SCAF8Q9UPN6 1271 aaKnown RBP19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 C7orf72A4D263 438 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 LRRIQ4A6NIV6 560 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 PRPSAP2O60256 369 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 PSAPP07602 524 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 IL4RP24394 825 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 BAG6P46379 1132 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 GRM1Q13255 1194 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 SPIDRQ14159 915 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 PDK2Q15119 407 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 PPM1JQ5JR12 505 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 GIPC3Q8TF64 312 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 RCN3Q96D15 328 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 CNPY3Q9BT09 278 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 SLC4A5Q9BY07 1137 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 VPS45Q9NRW7 570 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 PNPLA3Q9NST1 481 aa19.04■□□□□ 0.64
SFSWAP-207ENST00000538548 TMEM114B3SHH9 223 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 CFLARO15519 480 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 GCATO75600 419 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 ZFXP17010 805 aaPredicted RBP19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 PROZP22891 400 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 TYK2P29597 1187 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 GRIA1P42261 906 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 NAMPTP43490 491 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 NAA20P61599 178 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 TRPC3Q13507 836 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 NRF1Q16656 503 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 SH3PXD2AQ5TCZ1 1133 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 CPXCR1Q8N123 301 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 RMND5BQ96G75 393 aaPredicted RBP19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 ADPGKQ9BRR6 497 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 PDZD7Q9H5P4 517 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 WDR41Q9HAD4 459 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 PXMP2Q9NR77 195 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 WDR27A2RRH5 827 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 ACOT8O14734 319 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 MAP3K6O95382 1288 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 PDGFRBP09619 1106 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 PTPN1P18031 435 aaKnown RBP19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 ZNF699Q32M78 642 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 MTERF2Q49AM1 385 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 FAM102AQ5T9C2 384 aaPredicted RBP19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 SLC9A4Q6AI14 798 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 ELMSAN1Q6PJG2 1045 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 ANKRD23Q86SG2 305 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 CDKL3Q8IVW4 592 aaPredicted RBP19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 LZTR1Q8N653 840 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 TDRD5Q8NAT2 981 aaKnown RBP19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 HM13Q8TCT9 377 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 USP13Q92995 863 aaPredicted RBP19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 SLC35B4Q969S0 331 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 TMEM143Q96AN5 459 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 CAAP1Q9H8G2 361 aa19.03■□□□□ 0.64
SFSWAP-207ENST00000538548 SCN4AP35499 1836 aa19.02■□□□□ 0.64
SFSWAP-207ENST00000538548 BMP10O95393 424 aa19.02■□□□□ 0.64
SFSWAP-207ENST00000538548 GPD1P21695 349 aa19.02■□□□□ 0.64
SFSWAP-207ENST00000538548 NDST2P52849 883 aa19.02■□□□□ 0.64
SFSWAP-207ENST00000538548 STILQ15468 1287 aa19.02■□□□□ 0.64
SFSWAP-207ENST00000538548 PDCD4Q53EL6 469 aaKnown RBP19.02■□□□□ 0.64
SFSWAP-207ENST00000538548 KRT80Q6KB66 452 aa19.02■□□□□ 0.64
SFSWAP-207ENST00000538548 RNF148Q8N7C7 305 aa19.02■□□□□ 0.64
SFSWAP-207ENST00000538548 VPS33BQ9H267 617 aa19.02■□□□□ 0.64
SFSWAP-207ENST00000538548 PICK1Q9NRD5 415 aa19.02■□□□□ 0.64
SFSWAP-207ENST00000538548 ZNF277Q9NRM2 450 aaPredicted RBP19.02■□□□□ 0.64
SFSWAP-207ENST00000538548 OLAHQ9NV23 265 aa19.02■□□□□ 0.64
SFSWAP-207ENST00000538548 SIP14410 1827 aa19.02■□□□□ 0.64
SFSWAP-207ENST00000538548 ZNF701M0R085 212 aaPredicted RBP19.02■□□□□ 0.63
SFSWAP-207ENST00000538548 EDN1P05305 212 aa19.02■□□□□ 0.63
SFSWAP-207ENST00000538548 ENO3P13929 434 aaPredicted RBP19.02■□□□□ 0.63
SFSWAP-207ENST00000538548 DPEP1P16444 411 aa19.02■□□□□ 0.63
SFSWAP-207ENST00000538548 ADSLP30566 484 aaPredicted RBP19.02■□□□□ 0.63
SFSWAP-207ENST00000538548 RFTN1Q14699 578 aaPredicted RBP19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 295.1 ms