RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 RINT1Q6NUQ1 792 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 FBXL19Q6PCT2 694 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 DCLRE1AQ6PJP8 1040 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 RNF111Q6ZNA4 994 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 AGMOQ6ZNB7 445 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 C1orf186Q6ZWK4 172 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 MIER3Q7Z3K6 550 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 KRT27Q7Z3Y8 459 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 DNAAF5Q86Y56 855 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 DZIP1Q86YF9 867 aaKnown RBP6.89□□□□□ -1.31
USP28-207ENST00000538475 NUDCD3Q8IVD9 361 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 CHERPQ8IWX8 916 aaKnown RBP6.89□□□□□ -1.31
USP28-207ENST00000538475 DNAJC10Q8IXB1 793 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 GSTCDQ8NEC7 633 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 PIWIL2Q8TC59 973 aaKnown RBP6.89□□□□□ -1.31
USP28-207ENST00000538475 STARD8Q92502 1023 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 KCNN1Q92952 543 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 ATP6V0A1Q93050 837 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 HSPBAP1Q96EW2 488 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 DNAJC1Q96KC8 554 aaKnown RBP6.89□□□□□ -1.31
USP28-207ENST00000538475 DMRTB1Q96MA1 342 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 GCOM2Q9BZD3 368 aaPredicted RBP6.89□□□□□ -1.31
USP28-207ENST00000538475 PSTPIP2Q9H939 334 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 MOV10Q9HCE1 1003 aaKnown RBP6.89□□□□□ -1.31
USP28-207ENST00000538475 TRPC7Q9HCX4 862 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 RAB20Q9NX57 234 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 QPCTLQ9NXS2 382 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 TMOD2Q9NZR1 351 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 DKK3Q9UBP4 350 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 SNX9Q9Y5X1 595 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 ABCA3Q99758 1704 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 GAKO14976 1311 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 EMSYQ7Z589 1322 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 hCG_2014768A0A024R1R8 64 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 A0A096LPE4 126 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 NPHP3-ACAD11A0A0J9YXS1 232 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 FAM237BA0A1B0GVD1 139 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 PRSS51A0A1B0GVH4 220 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 SCO2A0A1W2PP80 73 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 A0A1W2PPZ6 126 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 FOXO6A8MYZ6 492 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 PRR5-ARHGAP8B1AHC4 643 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 H3BSA7 217 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 SMIM22K7EJ46 135 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 TM4SF5O14894 197 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 ZBTB5O15062 677 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 MCF2LO15068 1137 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 CLIC2O15247 247 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 GRIN3BO60391 1043 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 SNAP91O60641 907 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 H2AFYO75367 372 aaKnown RBP6.88□□□□□ -1.31
USP28-207ENST00000538475 SULT1C4O75897 302 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 USP1O94782 785 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 FBXO21O94952 628 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 SGPL1O95470 568 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 NTRK1P04629 796 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 BPGMP07738 259 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 CYP2D6P10635 497 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 YBX3P16989 372 aaKnown RBP eCLIP6.88□□□□□ -1.31
USP28-207ENST00000538475 GLRA2P23416 452 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 HIBADHP31937 336 aaKnown RBP6.88□□□□□ -1.31
USP28-207ENST00000538475 CDK8P49336 464 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 NUMBP49757 651 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 MXI1P50539 228 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 HNRNPFP52597 415 aaKnown RBP6.88□□□□□ -1.31
USP28-207ENST00000538475 AQP5P55064 265 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 NAA20P61599 178 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 ARHGAP8P85298 464 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 CNTN2Q02246 1040 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 ZNF543Q08ER8 600 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 BST1Q10588 318 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 NAB1Q13506 487 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 TUBA3CQ13748 450 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 C16orf72Q14CZ0 275 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 INSCQ1MX18 579 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 SNRNP48Q6IEG0 339 aaKnown RBP6.88□□□□□ -1.31
USP28-207ENST00000538475 PLEKHA7Q6IQ23 1121 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 CLEC4GQ6UXB4 293 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 Q6ZS46 218 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 POLNQ7Z5Q5 900 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 GPR141Q7Z602 305 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 TTC7BQ86TV6 843 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 GPR180Q86V85 440 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 PHF13Q86YI8 300 aaPredicted RBP6.88□□□□□ -1.31
USP28-207ENST00000538475 ARID3BQ8IVW6 561 aaPredicted RBP6.88□□□□□ -1.31
USP28-207ENST00000538475 FAM178BQ8IXR5 827 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 SYNE4Q8N205 404 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 MYCT1Q8N699 235 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 NAT8LQ8N9F0 302 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 GOLM1Q8NBJ4 401 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 SLC35B2Q8TB61 432 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 PYDC1Q8WXC3 89 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 ATG4AQ8WYN0 398 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 DDX1Q92499 740 aaKnown RBP6.88□□□□□ -1.31
USP28-207ENST00000538475 GJA10Q969M2 543 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 PLEKHA8Q96JA3 519 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 CNDP1Q96KN2 507 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 ZNF597Q96LX8 424 aa6.88□□□□□ -1.31
USP28-207ENST00000538475 ZNF641Q96N77 438 aaPredicted RBP6.88□□□□□ -1.31
USP28-207ENST00000538475 RILPQ96NA2 401 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms