RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 COL9A2Q14055 689 aaPredicted RBP12.92□□□□□ -0.34
PRKDC-207ENST00000536483 ZNF234Q14588 700 aa12.92□□□□□ -0.34
PRKDC-207ENST00000536483 EIF4HQ15056 248 aaKnown RBP12.92□□□□□ -0.34
PRKDC-207ENST00000536483 HSP90AA4PQ58FG1 418 aa12.92□□□□□ -0.34
PRKDC-207ENST00000536483 SYPL2Q5VXT5 272 aa12.92□□□□□ -0.34
PRKDC-207ENST00000536483 TMPRSS6Q8IU80 811 aa12.92□□□□□ -0.34
PRKDC-207ENST00000536483 ZDHHC17Q8IUH5 632 aa12.92□□□□□ -0.34
PRKDC-207ENST00000536483 NAXDQ8IW45 347 aa12.92□□□□□ -0.34
PRKDC-207ENST00000536483 ZCCHC9Q8N567 271 aaKnown RBP12.92□□□□□ -0.34
PRKDC-207ENST00000536483 PNPLA1Q8N8W4 532 aa12.92□□□□□ -0.34
PRKDC-207ENST00000536483 UCMAQ8WVF2 138 aa12.92□□□□□ -0.34
PRKDC-207ENST00000536483 DNASE2BQ8WZ79 361 aa12.92□□□□□ -0.34
PRKDC-207ENST00000536483 PPP1R13BQ96KQ4 1090 aa12.92□□□□□ -0.34
PRKDC-207ENST00000536483 FCRL2Q96LA5 508 aaPredicted RBP12.92□□□□□ -0.34
PRKDC-207ENST00000536483 NOX5Q96PH1 765 aa12.92□□□□□ -0.34
PRKDC-207ENST00000536483 SLC2A13Q96QE2 648 aa12.92□□□□□ -0.34
PRKDC-207ENST00000536483 CPXM1Q96SM3 734 aa12.92□□□□□ -0.34
PRKDC-207ENST00000536483 MIS12Q9H081 205 aa12.92□□□□□ -0.34
PRKDC-207ENST00000536483 MIR1-1HGQ9H1L0 117 aa12.92□□□□□ -0.34
PRKDC-207ENST00000536483 GANQ9H2C0 597 aa12.92□□□□□ -0.34
PRKDC-207ENST00000536483 ST7Q9NRC1 585 aa12.92□□□□□ -0.34
PRKDC-207ENST00000536483 ELOVL2Q9NXB9 296 aa12.92□□□□□ -0.34
PRKDC-207ENST00000536483 SIK3Q9Y2K2 1263 aa12.92□□□□□ -0.34
PRKDC-207ENST00000536483 FHOD1Q9Y613 1164 aa12.92□□□□□ -0.34
PRKDC-207ENST00000536483 A0A1B0GTW7 788 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 F8VZ95 297 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 MSI1O43347 362 aaKnown RBP12.91□□□□□ -0.34
PRKDC-207ENST00000536483 ACSL4O60488 711 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 SYNCRIPO60506 623 aaKnown RBP12.91□□□□□ -0.34
PRKDC-207ENST00000536483 LSM8O95777 96 aaKnown RBP12.91□□□□□ -0.34
PRKDC-207ENST00000536483 FTH1P19P0C7X4 201 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 HOXD9P28356 352 aaPredicted RBP12.91□□□□□ -0.34
PRKDC-207ENST00000536483 KRT9P35527 623 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 USP8P40818 1118 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 SLC11A2P49281 568 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 TPMTP51580 245 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 TBX4P57082 545 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 JAM2P57087 298 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 TYRO3Q06418 890 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 MTA1Q13330 715 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 FAM133BQ5BKY9 247 aaKnown RBP12.91□□□□□ -0.34
PRKDC-207ENST00000536483 EFHC1Q5JVL4 640 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 PIK3R6Q5UE93 754 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 DCAF12L1Q5VU92 463 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 LRSAM1Q6UWE0 723 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 SLC26A9Q7LBE3 791 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 ANKS1BQ7Z6G8 1248 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 ZNF677Q86XU0 584 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 CACUL1Q86Y37 369 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 ZNF557Q8N988 423 aaPredicted RBP12.91□□□□□ -0.34
PRKDC-207ENST00000536483 C1orf131Q8NDD1 294 aaKnown RBP12.91□□□□□ -0.34
PRKDC-207ENST00000536483 CADM4Q8NFZ8 388 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 SORCS1Q8WY21 1168 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 PRCCQ92733 491 aaPredicted RBP12.91□□□□□ -0.34
PRKDC-207ENST00000536483 NT5C3BQ969T7 300 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 TMA16Q96EY4 203 aaKnown RBP12.91□□□□□ -0.34
PRKDC-207ENST00000536483 SIPA1Q96FS4 1042 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 ERGIC2Q96RQ1 377 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 ZDHHC5Q9C0B5 715 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 CIPCQ9C0C6 399 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 TAB2Q9NYJ8 693 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 LHX6Q9UPM6 363 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 NAALADL1Q9UQQ1 740 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 DSPP15924 2871 aaKnown RBP12.91□□□□□ -0.34
PRKDC-207ENST00000536483 BAHCC1Q9P281 2608 aa12.91□□□□□ -0.34
PRKDC-207ENST00000536483 LGALS16A8MUM7 142 aa12.9□□□□□ -0.34
PRKDC-207ENST00000536483 METTL12A8MUP2 240 aa12.9□□□□□ -0.34
PRKDC-207ENST00000536483 PIK3R2O00459 728 aa12.9□□□□□ -0.34
PRKDC-207ENST00000536483 HSF2BPO75031 334 aa12.9□□□□□ -0.34
PRKDC-207ENST00000536483 CAPNS1P04632 268 aa12.9□□□□□ -0.34
PRKDC-207ENST00000536483 TPM2P07951 284 aa12.9□□□□□ -0.34
PRKDC-207ENST00000536483 ACADMP11310 421 aa12.9□□□□□ -0.34
PRKDC-207ENST00000536483 PRKCHP24723 683 aa12.9□□□□□ -0.34
PRKDC-207ENST00000536483 OXTRP30559 389 aa12.9□□□□□ -0.34
PRKDC-207ENST00000536483 COPB1P53618 953 aaKnown RBP12.9□□□□□ -0.34
PRKDC-207ENST00000536483 COPAP53621 1224 aa12.9□□□□□ -0.34
PRKDC-207ENST00000536483 SCAPQ12770 1279 aa12.9□□□□□ -0.34
PRKDC-207ENST00000536483 SKOR2Q2VWA4 1001 aaPredicted RBP12.9□□□□□ -0.34
PRKDC-207ENST00000536483 PTPN20Q4JDL3 420 aa12.9□□□□□ -0.34
PRKDC-207ENST00000536483 TMEM215Q68D42 235 aa12.9□□□□□ -0.34
PRKDC-207ENST00000536483 OLFML1Q6UWY5 402 aa12.9□□□□□ -0.34
PRKDC-207ENST00000536483 ARCQ7LC44 396 aa12.9□□□□□ -0.34
PRKDC-207ENST00000536483 PROSER1Q86XN7 944 aa12.9□□□□□ -0.34
PRKDC-207ENST00000536483 TMEM35BQ8NCS4 154 aa12.9□□□□□ -0.34
PRKDC-207ENST00000536483 DDI1Q8WTU0 396 aa12.9□□□□□ -0.34
PRKDC-207ENST00000536483 ADAMTS14Q8WXS8 1223 aa12.9□□□□□ -0.34
PRKDC-207ENST00000536483 LMLNQ96KR4 655 aa12.9□□□□□ -0.34
PRKDC-207ENST00000536483 DDX50Q9BQ39 737 aaKnown RBP12.9□□□□□ -0.34
PRKDC-207ENST00000536483 NAT10Q9H0A0 1025 aaKnown RBP12.9□□□□□ -0.34
PRKDC-207ENST00000536483 VPS16Q9H269 839 aa12.9□□□□□ -0.34
PRKDC-207ENST00000536483 IL21RQ9HBE5 538 aa12.9□□□□□ -0.34
PRKDC-207ENST00000536483 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.9□□□□□ -0.34
PRKDC-207ENST00000536483 RRN3Q9NYV6 651 aa12.9□□□□□ -0.34
PRKDC-207ENST00000536483 TJP2Q9UDY2 1190 aa12.9□□□□□ -0.34
PRKDC-207ENST00000536483 KCNU1A8MYU2 1149 aa12.89□□□□□ -0.35
PRKDC-207ENST00000536483 BCAT2O15382 392 aaPredicted RBP12.89□□□□□ -0.35
PRKDC-207ENST00000536483 CBFA2T3O75081 653 aa12.89□□□□□ -0.35
PRKDC-207ENST00000536483 TRUB2O95900 331 aaKnown RBP12.89□□□□□ -0.35
PRKDC-207ENST00000536483 EPHX1P07099 455 aa12.89□□□□□ -0.35
PRKDC-207ENST00000536483 PNMA6AP0CW24 399 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms