RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 SAE1Q9UBE0 346 aaPredicted RBP11.88□□□□□ -0.51
CDCA3-206ENST00000536241 PPARGC1AQ9UBK2 798 aaKnown RBP11.88□□□□□ -0.51
CDCA3-206ENST00000536241 RNF14Q9UBS8 474 aa11.88□□□□□ -0.51
CDCA3-206ENST00000536241 EFR3BQ9Y2G0 817 aa11.88□□□□□ -0.51
CDCA3-206ENST00000536241 NR2E1Q9Y466 385 aa11.88□□□□□ -0.51
CDCA3-206ENST00000536241 WNT6Q9Y6F9 365 aa11.88□□□□□ -0.51
CDCA3-206ENST00000536241 ZFP37Q9Y6Q3 630 aaPredicted RBP11.88□□□□□ -0.51
CDCA3-206ENST00000536241 REV3LO60673 3130 aa11.87□□□□□ -0.51
CDCA3-206ENST00000536241 ZNF487B1APH4 448 aa11.87□□□□□ -0.51
CDCA3-206ENST00000536241 PGRMC1O00264 195 aaKnown RBP11.87□□□□□ -0.51
CDCA3-206ENST00000536241 APOL1O14791 398 aa11.87□□□□□ -0.51
CDCA3-206ENST00000536241 DCLK1O15075 740 aa11.87□□□□□ -0.51
CDCA3-206ENST00000536241 SGSHP51688 502 aa11.87□□□□□ -0.51
CDCA3-206ENST00000536241 KLF1Q13351 362 aaPredicted RBP11.87□□□□□ -0.51
CDCA3-206ENST00000536241 TFDP2Q14188 446 aa11.87□□□□□ -0.51
CDCA3-206ENST00000536241 C5orf22Q49AR2 442 aa11.87□□□□□ -0.51
CDCA3-206ENST00000536241 SLC9A4Q6AI14 798 aa11.87□□□□□ -0.51
CDCA3-206ENST00000536241 C1orf228Q6PIY5 440 aa11.87□□□□□ -0.51
CDCA3-206ENST00000536241 NPNTQ6UXI9 565 aa11.87□□□□□ -0.51
CDCA3-206ENST00000536241 BBS12Q6ZW61 710 aa11.87□□□□□ -0.51
CDCA3-206ENST00000536241 CIR1Q86X95 450 aaPredicted RBP11.87□□□□□ -0.51
CDCA3-206ENST00000536241 FAM217AQ8IXS0 508 aa11.87□□□□□ -0.51
CDCA3-206ENST00000536241 CPXM2Q8N436 756 aa11.87□□□□□ -0.51
CDCA3-206ENST00000536241 PLD5Q8N7P1 536 aa11.87□□□□□ -0.51
CDCA3-206ENST00000536241 TDRD5Q8NAT2 981 aaKnown RBP11.87□□□□□ -0.51
CDCA3-206ENST00000536241 NETO2Q8NC67 525 aa11.87□□□□□ -0.51
CDCA3-206ENST00000536241 FGF14Q92915 247 aa11.87□□□□□ -0.51
CDCA3-206ENST00000536241 HAUS1Q96CS2 278 aa11.87□□□□□ -0.51
CDCA3-206ENST00000536241 P2RY11Q96G91 374 aa11.87□□□□□ -0.51
CDCA3-206ENST00000536241 KXD1Q9BQD3 176 aa11.87□□□□□ -0.51
CDCA3-206ENST00000536241 AP1M1Q9BXS5 423 aa11.87□□□□□ -0.51
CDCA3-206ENST00000536241 ZYG11BQ9C0D3 744 aa11.87□□□□□ -0.51
CDCA3-206ENST00000536241 CATSPERBQ9H7T0 1116 aa11.87□□□□□ -0.51
CDCA3-206ENST00000536241 NDFIP2Q9NV92 336 aa11.87□□□□□ -0.51
CDCA3-206ENST00000536241 DUS2Q9NX74 493 aaKnown RBP11.87□□□□□ -0.51
CDCA3-206ENST00000536241 OBP2AQ9NY56 170 aa11.87□□□□□ -0.51
CDCA3-206ENST00000536241 NEU3Q9UQ49 428 aa11.87□□□□□ -0.51
CDCA3-206ENST00000536241 HELZP42694 1942 aaKnown RBP11.86□□□□□ -0.51
CDCA3-206ENST00000536241 MYOFQ9NZM1 2061 aa11.86□□□□□ -0.51
CDCA3-206ENST00000536241 GFRA2O00451 464 aa11.86□□□□□ -0.51
CDCA3-206ENST00000536241 SLC9A3R1O14745 358 aaPredicted RBP11.86□□□□□ -0.51
CDCA3-206ENST00000536241 TBL1XO60907 577 aa11.86□□□□□ -0.51
CDCA3-206ENST00000536241 MAP3K6O95382 1288 aa11.86□□□□□ -0.51
CDCA3-206ENST00000536241 RHOQP17081 205 aa11.86□□□□□ -0.51
CDCA3-206ENST00000536241 HOXC13P31276 330 aa11.86□□□□□ -0.51
CDCA3-206ENST00000536241 HTR7P34969 479 aa11.86□□□□□ -0.51
CDCA3-206ENST00000536241 TFF2Q03403 129 aa11.86□□□□□ -0.51
CDCA3-206ENST00000536241 SLC10A2Q12908 348 aaPredicted RBP11.86□□□□□ -0.51
CDCA3-206ENST00000536241 SIX1Q15475 284 aaPredicted RBP11.86□□□□□ -0.51
CDCA3-206ENST00000536241 WHAMMP3Q1A5X7 153 aa11.86□□□□□ -0.51
CDCA3-206ENST00000536241 LEXMQ3ZCV2 418 aa11.86□□□□□ -0.51
CDCA3-206ENST00000536241 RABGAP1LQ5R372 815 aa11.86□□□□□ -0.51
CDCA3-206ENST00000536241 NCBP2-AS2Q69YL0 99 aa11.86□□□□□ -0.51
CDCA3-206ENST00000536241 TRIM68Q6AZZ1 485 aa11.86□□□□□ -0.51
CDCA3-206ENST00000536241 VITQ6UXI7 678 aa11.86□□□□□ -0.51
CDCA3-206ENST00000536241 TFAP2DQ7Z6R9 452 aa11.86□□□□□ -0.51
CDCA3-206ENST00000536241 NLRP14Q86W24 1093 aa11.86□□□□□ -0.51
CDCA3-206ENST00000536241 TMEM25Q86YD3 366 aa11.86□□□□□ -0.51
CDCA3-206ENST00000536241 MFSD6LQ8IWD5 586 aa11.86□□□□□ -0.51
CDCA3-206ENST00000536241 MAFAQ8NHW3 353 aaPredicted RBP11.86□□□□□ -0.51
CDCA3-206ENST00000536241 DDI1Q8WTU0 396 aa11.86□□□□□ -0.51
CDCA3-206ENST00000536241 BHMTQ93088 406 aa11.86□□□□□ -0.51
CDCA3-206ENST00000536241 E2F7Q96AV8 911 aa11.86□□□□□ -0.51
CDCA3-206ENST00000536241 ZFYVE19Q96K21 471 aa11.86□□□□□ -0.51
CDCA3-206ENST00000536241 RPGRIP1Q96KN7 1286 aa11.86□□□□□ -0.51
CDCA3-206ENST00000536241 PRICKLE1Q96MT3 831 aaPredicted RBP11.86□□□□□ -0.51
CDCA3-206ENST00000536241 NAP1L3Q99457 506 aaPredicted RBP11.86□□□□□ -0.51
CDCA3-206ENST00000536241 FAM118BQ9BPY3 351 aa11.86□□□□□ -0.51
CDCA3-206ENST00000536241 THG1LQ9NWX6 298 aaKnown RBP11.86□□□□□ -0.51
CDCA3-206ENST00000536241 PLK2Q9NYY3 685 aa11.86□□□□□ -0.51
CDCA3-206ENST00000536241 EPS15L1Q9UBC2 864 aa11.86□□□□□ -0.51
CDCA3-206ENST00000536241 HEY1Q9Y5J3 304 aa11.86□□□□□ -0.51
CDCA3-206ENST00000536241 NUP205Q92621 2012 aa11.86□□□□□ -0.51
CDCA3-206ENST00000536241 WASH4PA8MWX3 477 aa11.85□□□□□ -0.51
CDCA3-206ENST00000536241 C2CD4DB7Z1M9 353 aa11.85□□□□□ -0.51
CDCA3-206ENST00000536241 KRIT1O00522 736 aa11.85□□□□□ -0.51
CDCA3-206ENST00000536241 ZFXP17010 805 aaPredicted RBP11.85□□□□□ -0.51
CDCA3-206ENST00000536241 GBE1Q04446 702 aa11.85□□□□□ -0.51
CDCA3-206ENST00000536241 GRM2Q14416 872 aa11.85□□□□□ -0.51
CDCA3-206ENST00000536241 PAFAH1B3Q15102 231 aaKnown RBP11.85□□□□□ -0.51
CDCA3-206ENST00000536241 SMAD2Q15796 467 aaKnown RBP11.85□□□□□ -0.51
CDCA3-206ENST00000536241 MPPE1Q53F39 396 aa11.85□□□□□ -0.51
CDCA3-206ENST00000536241 LY6G5CQ5SRR4 150 aa11.85□□□□□ -0.51
CDCA3-206ENST00000536241 PTCRAQ6ISU1 281 aaPredicted RBP11.85□□□□□ -0.51
CDCA3-206ENST00000536241 RHBDF2Q6PJF5 856 aa11.85□□□□□ -0.51
CDCA3-206ENST00000536241 TMCO3Q6UWJ1 677 aa11.85□□□□□ -0.51
CDCA3-206ENST00000536241 TP53INP2Q8IXH6 220 aa11.85□□□□□ -0.51
CDCA3-206ENST00000536241 CCDC33Q8N5R6 958 aa11.85□□□□□ -0.51
CDCA3-206ENST00000536241 RTL3Q8N8U3 475 aaKnown RBP11.85□□□□□ -0.51
CDCA3-206ENST00000536241 ACTL9Q8TC94 416 aa11.85□□□□□ -0.51
CDCA3-206ENST00000536241 OSCP1Q8WVF1 389 aa11.85□□□□□ -0.51
CDCA3-206ENST00000536241 MAIP1Q8WWC4 291 aa11.85□□□□□ -0.51
CDCA3-206ENST00000536241 C1orf54Q8WWF1 131 aa11.85□□□□□ -0.51
CDCA3-206ENST00000536241 RSAD2Q8WXG1 361 aa11.85□□□□□ -0.51
CDCA3-206ENST00000536241 P3H4Q92791 437 aa11.85□□□□□ -0.51
CDCA3-206ENST00000536241 IRF7Q92985 503 aa11.85□□□□□ -0.51
CDCA3-206ENST00000536241 ELSPBP1Q96BH3 223 aa11.85□□□□□ -0.51
CDCA3-206ENST00000536241 OTUB2Q96DC9 234 aa11.85□□□□□ -0.51
CDCA3-206ENST00000536241 ASIC4Q96FT7 647 aa11.85□□□□□ -0.51
CDCA3-206ENST00000536241 PHF7Q9BWX1 381 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms