RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 NNMTP40261 264 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 CSKP41240 450 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 ARRB1P49407 418 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 SGSHP51688 502 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 CETN1Q12798 172 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 STILQ15468 1287 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 CST6Q15828 149 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 HNRNPA1L2Q32P51 320 aaKnown RBP13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 CBWD6Q4V339 395 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 CBWD3Q5JTY5 395 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 CBWD5Q5RIA9 395 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 PIK3R6Q5UE93 754 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 MSANTD2Q6P1R3 559 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 NCEH1Q6PIU2 408 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 TMEM270Q6UE05 265 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 LRRC69Q6ZNQ3 347 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 KIAA0907Q7Z7F0 614 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 MARCH9Q86YJ5 346 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 SCML4Q8N228 414 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 WFDC5Q8TCV5 224 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 CNDP2Q96KP4 475 aaKnown RBP13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 ELF4Q99607 663 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 PCDHB4Q9Y5E5 795 aa13.46□□□□□ -0.25
TNFRSF1A-207ENST00000535958 TP53BP1Q12888 1972 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 EDDM13A0A1B0GTR0 161 aa13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 GOLGA6L7A0A1B0GV03 622 aa13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 CAPN9O14815 690 aa13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 MID1O15344 667 aa13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 PAPSS1O43252 624 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 RFPL3O75679 317 aa13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 FBXO21O94952 628 aa13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 LDOC1O95751 146 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 MOCS2O96007 188 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 APOEP02649 317 aa13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 PAEPP09466 180 aa13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 CD38P28907 300 aa13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 PSMD8P48556 350 aa13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 FKBP3Q00688 224 aaKnown RBP13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 SND1Q7KZF4 910 aaKnown RBP eCLIP13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 GATAD2AQ86YP4 633 aa13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 MMAAQ8IVH4 418 aaKnown RBP13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 OXR1Q8N573 874 aa13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 OR2T34Q8NGX1 318 aa13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 FIBINQ8TAL6 211 aa13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 FAM149B1Q96BN6 582 aa13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 NT5C1BQ96P26 610 aa13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 TRIM62Q9BVG3 475 aa13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 SCAND2PQ9GZW5 306 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 TJP2Q9UDY2 1190 aa13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 ARMCX3Q9UH62 379 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 FZD4Q9ULV1 537 aa13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 TPX2Q9ULW0 747 aaKnown RBP13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 PCDHGA1Q9Y5H4 931 aa13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 AK5Q9Y6K8 562 aa13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 GOLGA4Q13439 2230 aaKnown RBP13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 NBEAQ8NFP9 2946 aa13.45□□□□□ -0.26
TNFRSF1A-207ENST00000535958 FAM237AA0A1B0GTK4 181 aa13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 A0A1W2PQ27 194 aa13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 A0A1W2PQ64 194 aa13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 TARSL2A2RTX5 802 aaKnown RBP13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 PLK4O00444 970 aa13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 SART1O43290 800 aaKnown RBP13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 ZNF202O95125 648 aa13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 ADH1BP00325 375 aa13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 IGLV3-27P01718 113 aa13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 IGHV4-34P06331 123 aa13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 SRPRAP08240 638 aaKnown RBP13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 SLC6A4P31645 630 aa13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 GALCP54803 685 aa13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 STIM1Q13586 685 aa13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 FAM133BQ5BKY9 247 aaKnown RBP13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 LCLAT1Q6UWP7 414 aa13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 ZC3H3Q8IXZ2 948 aaKnown RBP13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 PPM1KQ8N3J5 372 aa13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 KDM1BQ8NB78 822 aa13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 OR14C36Q8NHC7 312 aa13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 PIP4K2CQ8TBX8 421 aa13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 AZIN2Q96A70 460 aa13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 TTC17Q96AE7 1141 aa13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 SERAC1Q96JX3 654 aa13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 MIS12Q9H081 205 aa13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 MTG2Q9H4K7 406 aa13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 ST7Q9NRC1 585 aa13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 COQ4Q9Y3A0 265 aa13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 CABIN1Q9Y6J0 2220 aa13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 PLXNA2O75051 1894 aa13.44□□□□□ -0.26
TNFRSF1A-207ENST00000535958 A0A087WV48 116 aa13.43□□□□□ -0.26
TNFRSF1A-207ENST00000535958 RRP8O43159 456 aaKnown RBP13.43□□□□□ -0.26
TNFRSF1A-207ENST00000535958 LUC7L3O95232 432 aaKnown RBP13.43□□□□□ -0.26
TNFRSF1A-207ENST00000535958 SMC2O95347 1197 aa13.43□□□□□ -0.26
TNFRSF1A-207ENST00000535958 IL1BP01584 269 aa13.43□□□□□ -0.26
TNFRSF1A-207ENST00000535958 C1SP09871 688 aa13.43□□□□□ -0.26
TNFRSF1A-207ENST00000535958 C7P10643 843 aa13.43□□□□□ -0.26
TNFRSF1A-207ENST00000535958 SLC8A1P32418 973 aa13.43□□□□□ -0.26
TNFRSF1A-207ENST00000535958 RPS24P62847 133 aaKnown RBP13.43□□□□□ -0.26
TNFRSF1A-207ENST00000535958 LRRC63Q05C16 580 aa13.43□□□□□ -0.26
TNFRSF1A-207ENST00000535958 CAMK2BQ13554 666 aa13.43□□□□□ -0.26
TNFRSF1A-207ENST00000535958 CCDC40Q4G0X9 1142 aa13.43□□□□□ -0.26
TNFRSF1A-207ENST00000535958 HS1BP3Q53T59 392 aa13.43□□□□□ -0.26
TNFRSF1A-207ENST00000535958 PITRM1Q5JRX3 1037 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms