RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 SLC11A2P49281 568 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 KLK7P49862 253 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 RNASE9P60153 205 aaKnown RBP9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 KCNMA1Q12791 1236 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 PDCLQ13371 301 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 KRT31Q15323 416 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 TAF5Q15542 800 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 TRIP4Q15650 581 aaPredicted RBP9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 MPPE1Q53F39 396 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 USP39Q53GS9 565 aaKnown RBP9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 FKBP15Q5T1M5 1219 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 KLHDC7AQ5VTJ3 777 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 FYB2Q5VWT5 728 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 SYPL2Q5VXT5 272 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 CAVIN1Q6NZI2 390 aaKnown RBP9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 TRMT11Q7Z4G4 463 aaKnown RBP9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 C1orf131Q8NDD1 294 aaKnown RBP9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 ANKRD20A12PQ8NF67 263 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 MDGA1Q8NFP4 955 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 DQX1Q8TE96 717 aaKnown RBP9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 RNF34Q969K3 372 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 TMA16Q96EY4 203 aaKnown RBP9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 P2RY11Q96G91 374 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 PPP1R13BQ96KQ4 1090 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 DMRTB1Q96MA1 342 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 NOX5Q96PH1 765 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 CIPCQ9C0C6 399 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 FAM204AQ9H8W3 233 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 NEUROD4Q9HD90 331 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 NLRC4Q9NPP4 1024 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 FAM207AQ9NSI2 230 aaPredicted RBP9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 CACNA2D2Q9NY47 1150 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 MARK1Q9P0L2 795 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 CLEC4EQ9ULY5 219 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 CEP83Q9Y592 693 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 DMDP11532 3685 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 FANCMQ8IYD8 2048 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 PIEZO1Q92508 2521 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 A0A0A0MRY4 1105 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 PAPSS1O43252 624 aaPredicted RBP9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 SART1O43290 800 aaKnown RBP9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 TBL1XO60907 577 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 GFPT2O94808 682 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 FYNP06241 537 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 RETP07949 1114 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 CISD3P0C7P0 127 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 UCHL3P15374 230 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 ID4P47928 161 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 NUMBP49757 651 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 SGSHP51688 502 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 POLR2FP61218 127 aaKnown RBP9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 YWHAZP63104 245 aaKnown RBP9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 MYL5Q02045 173 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 CREB5Q02930 508 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 TYRO3Q06418 890 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 ELF2Q15723 593 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 GEN1Q17RS7 908 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 DCAF6Q58WW2 860 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 CT47A1Q5JQC4 288 aaPredicted RBP9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 ADGRF1Q5T601 910 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 RBM43Q6ZSC3 357 aaKnown RBP9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 ARMCX6Q7L4S7 300 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 TAC4Q86UU9 113 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 UNC45BQ8IWX7 931 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 FAM71AQ8IYT1 594 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 SCML4Q8N228 414 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 WDTC1Q8N5D0 677 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 DEFB119Q8N690 84 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 AOPEPQ8N6M6 819 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 FRMD1Q8N878 549 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 SORCS1Q8WY21 1168 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 PIWIL1Q96J94 861 aaKnown RBP9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 SERPINB11Q96P15 392 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 CPXM1Q96SM3 734 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 SLC6A17Q9H1V8 727 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 SMOC1Q9H4F8 434 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 PARD6AQ9NPB6 346 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 ATP13A2Q9NQ11 1180 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 TMEM63CQ9P1W3 806 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 KIAA1549LQ6ZVL6 1849 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 FRYLO94915 3013 aa9.28□□□□□ -0.92
CCDC90B-219ENST00000534753 CCDC163A0A0D9SF12 145 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 GOLGA8SH3BPF8 625 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 LCE2BO14633 110 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 ACSL4O60488 711 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 RHOBTB1O94844 696 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 TRUB2O95900 331 aaKnown RBP9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 PENKP01210 267 aaPredicted RBP9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 APOEP02649 317 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 ERBB2P04626 1255 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 BCKDHBP21953 392 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 SLC6A4P31645 630 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 DHPSP49366 369 aaPredicted RBP9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 COPB1P53618 953 aaKnown RBP9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 BPIFB4P59827 614 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 PITX1P78337 314 aaPredicted RBP9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 UBXN1Q04323 297 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 NME3Q13232 169 aa9.27□□□□□ -0.93
CCDC90B-219ENST00000534753 RSPO4Q2I0M5 234 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms