RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 CYBBP04839 570 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 PDGFRAP16234 1089 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 SPINK2P20155 84 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 GLDCP23378 1020 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 ACADSBP45954 432 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 RPS14P62263 151 aaKnown RBP9.97□□□□□ -0.81
SSBP3-215ENST00000533946 NOMO3P69849 1222 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 ARHGAP8P85298 464 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 SLC6A3Q01959 620 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 PTK2Q05397 1052 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 ZNF33AQ06730 810 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 PTP4A2Q12974 167 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 CAMK2GQ13555 558 aaPredicted RBP9.97□□□□□ -0.81
SSBP3-215ENST00000533946 UAP1L1Q3KQV9 507 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 HSF5Q4G112 596 aaPredicted RBP9.97□□□□□ -0.81
SSBP3-215ENST00000533946 FNDC3BQ53EP0 1204 aaKnown RBP9.97□□□□□ -0.81
SSBP3-215ENST00000533946 ALFQ53S48 1182 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 TRIM61Q5EBN2 209 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 PITRM1Q5JRX3 1037 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 N4BP2L1Q5TBK1 243 aaPredicted RBP9.97□□□□□ -0.81
SSBP3-215ENST00000533946 E4F1Q66K89 784 aaPredicted RBP9.97□□□□□ -0.81
SSBP3-215ENST00000533946 SERPINA13PQ6UXR4 307 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 LPCAT2Q7L5N7 544 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 CHSY1Q86X52 802 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 MFN1Q8IWA4 741 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 DHX40Q8IX18 779 aaKnown RBP9.97□□□□□ -0.81
SSBP3-215ENST00000533946 ZNF683Q8IZ20 524 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 AOPEPQ8N6M6 819 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 JOSD2Q8TAC2 188 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 FIBINQ8TAL6 211 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 NETO1Q8TDF5 533 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 EPS8L1Q8TE68 723 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 CAMK1GQ96NX5 476 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 NPY6RQ99463 290 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 SIK2Q9H0K1 926 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 C6orf106Q9H6K1 298 aaPredicted RBP9.97□□□□□ -0.81
SSBP3-215ENST00000533946 EBF2Q9HAK2 575 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 IL21RQ9HBE5 538 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 ITM2CQ9NQX7 267 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 WSB2Q9NYS7 404 aaPredicted RBP9.97□□□□□ -0.81
SSBP3-215ENST00000533946 USP36Q9P275 1121 aaKnown RBP9.97□□□□□ -0.81
SSBP3-215ENST00000533946 VANGL2Q9ULK5 521 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 PCDHGA5Q9Y5G8 931 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 KMT2BQ9UMN6 2715 aaPredicted RBP9.97□□□□□ -0.81
SSBP3-215ENST00000533946 PCNX2A6NKB5 2137 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 LAMA5O15230 3695 aa9.96□□□□□ -0.81
SSBP3-215ENST00000533946 DOCK4Q8N1I0 1966 aa9.96□□□□□ -0.81
SSBP3-215ENST00000533946 K7ERQ8 282 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 M0QYT0 321 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 KCNK3O14649 394 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 LUC7L3O95232 432 aaKnown RBP9.96□□□□□ -0.82
SSBP3-215ENST00000533946 MT-CO1P00395 513 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 CFIP05156 583 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 ENGP17813 658 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 CDH5P33151 784 aaPredicted RBP9.96□□□□□ -0.82
SSBP3-215ENST00000533946 KRT9P35527 623 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 SLC11A2P49281 568 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 ARID5AQ03989 594 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 TYRO3Q06418 890 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 AUHQ13825 339 aaKnown RBP9.96□□□□□ -0.82
SSBP3-215ENST00000533946 C15orf59Q2T9L4 293 aaPredicted RBP9.96□□□□□ -0.82
SSBP3-215ENST00000533946 ANO6Q4KMQ2 910 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 C9orf64Q5T6V5 341 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 LYSMD4Q5XG99 296 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 NUGGCQ68CJ6 796 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 SDE2Q6IQ49 451 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 ERMP1Q7Z2K6 904 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 UNC45BQ8IWX7 931 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 CCAR2Q8N163 923 aaKnown RBP9.96□□□□□ -0.82
SSBP3-215ENST00000533946 C12orf50Q8NA57 414 aaPredicted RBP9.96□□□□□ -0.82
SSBP3-215ENST00000533946 NETO2Q8NC67 525 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 HJURPQ8NCD3 748 aaPredicted RBP9.96□□□□□ -0.82
SSBP3-215ENST00000533946 C1orf216Q8TAB5 229 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 AZIN2Q96A70 460 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 TTC17Q96AE7 1141 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 SIPA1Q96FS4 1042 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 ZNF419Q96HQ0 510 aaPredicted RBP9.96□□□□□ -0.82
SSBP3-215ENST00000533946 CFAP57Q96MR6 1250 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 NAP1L5Q96NT1 182 aaPredicted RBP9.96□□□□□ -0.82
SSBP3-215ENST00000533946 SERPINB11Q96P15 392 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 FAM129BQ96TA1 746 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 ORAI3Q9BRQ5 295 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 RTKNQ9BST9 563 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 STK33Q9BYT3 514 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 SLC2A11Q9BYW1 496 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 CAPN10Q9HC96 672 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 TAS2R14Q9NYV8 317 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 MPP6Q9NZW5 540 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 LIMA1Q9UHB6 759 aaKnown RBP9.96□□□□□ -0.82
SSBP3-215ENST00000533946 TMEM59LQ9UK28 342 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 ERVW-1Q9UQF0 538 aa9.96□□□□□ -0.82
SSBP3-215ENST00000533946 FAM72CH0Y354 149 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 KHNYNO15037 678 aaKnown RBP9.95□□□□□ -0.82
SSBP3-215ENST00000533946 SNAP91O60641 907 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 DAB1O75553 588 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 LATS1O95835 1130 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 DLDP09622 509 aaKnown RBP9.95□□□□□ -0.82
SSBP3-215ENST00000533946 EEF1GP26641 437 aaKnown RBP9.95□□□□□ -0.82
SSBP3-215ENST00000533946 CD6P30203 668 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 GABRB2P47870 512 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms