RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 CLK2P49760 499 aaKnown RBP11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 ACOX1Q15067 660 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 DNAL1Q4LDG9 190 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 KCNT1Q5JUK3 1230 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 OR8D1Q8WZ84 308 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 TMEM159Q96B96 161 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 ACBD6Q9BR61 282 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 BBS2Q9BXC9 721 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 ATP13A3Q9H7F0 1226 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 PCDH9Q9HC56 1237 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 ADA2Q9NZK5 511 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 KIAA1522Q9P206 1035 aaPredicted RBP11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 IGLV3-22A0A075B6J6 115 aa11.52□□□□□ -0.56
AMBRA1-211ENST00000533727 C22orf31O95567 290 aa11.52□□□□□ -0.56
AMBRA1-211ENST00000533727 ACADSP16219 412 aa11.52□□□□□ -0.56
AMBRA1-211ENST00000533727 PRKCIP41743 596 aa11.52□□□□□ -0.56
AMBRA1-211ENST00000533727 PPP3CAQ08209 521 aa11.52□□□□□ -0.56
AMBRA1-211ENST00000533727 KCNA1Q09470 495 aa11.52□□□□□ -0.56
AMBRA1-211ENST00000533727 CCL14Q16627 93 aa11.52□□□□□ -0.56
AMBRA1-211ENST00000533727 SPDYAQ5MJ70 313 aa11.52□□□□□ -0.56
AMBRA1-211ENST00000533727 MMGT1Q8N4V1 131 aa11.52□□□□□ -0.56
AMBRA1-211ENST00000533727 SQORQ9Y6N5 450 aa11.52□□□□□ -0.56
AMBRA1-211ENST00000533727 ADGRA2Q96PE1 1338 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 KANSL1LA0AUZ9 987 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 PDZK1P1A8MUH7 402 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 C5orf58C9J3I9 102 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 SPTLC1O15269 473 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 HTR1BP28222 390 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 BRCC3P46736 316 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 CARSP49589 748 aaKnown RBP11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 ST3GAL1Q11201 340 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 MAPK7Q13164 816 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 TIGD5Q53EQ6 642 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 DAB2IPQ5VWQ8 1189 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 TPGS1Q6ZTW0 290 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 RRM2BQ7LG56 351 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 RBM23Q86U06 439 aaKnown RBP11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 SNRNP27Q8WVK2 155 aaKnown RBP11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 ARNTL2Q8WYA1 636 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 TNFRSF25Q93038 417 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 ERP27Q96DN0 273 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 FAR2Q96K12 515 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 OSGEPL1Q9H4B0 414 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 WHRNQ9P202 907 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 COL20A1Q9P218 1284 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 DEC1Q9P2X7 70 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 VANGL2Q9ULK5 521 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 TBC1D4O60343 1298 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 ENDOD1O94919 500 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 CYP2A7P20853 494 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 SERPINB8P50452 374 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 ZNF143P52747 638 aaPredicted RBP11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 SETMARQ53H47 684 aaPredicted RBP11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 HTR3CQ8WXA8 447 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 SLC9A7Q96T83 725 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 ZDHHC4Q9NPG8 344 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 ITM2BQ9Y287 266 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 USP20Q9Y2K6 914 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 GOLGA8TH3BQL2 631 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 RBP1P09455 135 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 MBTD1Q05BQ5 628 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 INTS6LQ5JSJ4 861 aaKnown RBP11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 LRRC6Q86X45 466 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 KIF2BQ8N4N8 673 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 COLGALT1Q8NBJ5 622 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 ACTRT1Q8TDG2 376 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 ZIM3Q96PE6 472 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 TCF25Q9BQ70 676 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 CCDC3Q9BQI4 270 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 TRIM51Q9BSJ1 452 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 C10orf88Q9H8K7 445 aa11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 TRMT13Q9NUP7 481 aaKnown RBP11.52□□□□□ -0.57
AMBRA1-211ENST00000533727 NWD2Q9ULI1 1742 aa11.51□□□□□ -0.57
AMBRA1-211ENST00000533727 ALS2Q96Q42 1657 aa11.51□□□□□ -0.57
AMBRA1-211ENST00000533727 OPLAHO14841 1288 aa11.51□□□□□ -0.57
AMBRA1-211ENST00000533727 MZF1P28698 734 aaPredicted RBP11.51□□□□□ -0.57
AMBRA1-211ENST00000533727 VHLP40337 213 aa11.51□□□□□ -0.57
AMBRA1-211ENST00000533727 VCPP55072 806 aaKnown RBP11.51□□□□□ -0.57
AMBRA1-211ENST00000533727 MARSP56192 900 aaKnown RBP11.51□□□□□ -0.57
AMBRA1-211ENST00000533727 AMIGO3Q86WK7 504 aa11.51□□□□□ -0.57
AMBRA1-211ENST00000533727 TDRD5Q8NAT2 981 aaKnown RBP11.51□□□□□ -0.57
AMBRA1-211ENST00000533727 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.51□□□□□ -0.57
AMBRA1-211ENST00000533727 SHC3Q92529 594 aa11.51□□□□□ -0.57
AMBRA1-211ENST00000533727 FUBP3Q96I24 572 aaKnown RBP eCLIP11.51□□□□□ -0.57
AMBRA1-211ENST00000533727 ARHGAP39Q9C0H5 1083 aa11.51□□□□□ -0.57
AMBRA1-211ENST00000533727 NDEL1Q9GZM8 345 aa11.51□□□□□ -0.57
AMBRA1-211ENST00000533727 UNC93B1Q9H1C4 597 aa11.51□□□□□ -0.57
AMBRA1-211ENST00000533727 ISCUQ9H1K1 167 aa11.51□□□□□ -0.57
AMBRA1-211ENST00000533727 OR12D3Q9UGF7 316 aa11.51□□□□□ -0.57
AMBRA1-211ENST00000533727 E7ENQ6 273 aa11.51□□□□□ -0.57
AMBRA1-211ENST00000533727 ZNF185O15231 689 aa11.51□□□□□ -0.57
AMBRA1-211ENST00000533727 TRIM16O95361 564 aa11.51□□□□□ -0.57
AMBRA1-211ENST00000533727 TNFSF9P41273 254 aa11.51□□□□□ -0.57
AMBRA1-211ENST00000533727 MRPS5P82675 430 aaKnown RBP11.51□□□□□ -0.57
AMBRA1-211ENST00000533727 CBWD6Q4V339 395 aa11.51□□□□□ -0.57
AMBRA1-211ENST00000533727 CBWD3Q5JTY5 395 aa11.51□□□□□ -0.57
AMBRA1-211ENST00000533727 CBWD5Q5RIA9 395 aa11.51□□□□□ -0.57
AMBRA1-211ENST00000533727 CASP10Q92851 521 aa11.51□□□□□ -0.57
AMBRA1-211ENST00000533727 SNX27Q96L92 541 aa11.51□□□□□ -0.57
AMBRA1-211ENST00000533727 NDUFA13Q9P0J0 144 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms