RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 PPM1JQ5JR12 505 aa17.05■□□□□ 0.32
CTSB-228ENST00000533455 VWA5B1Q5TIE3 1220 aa17.05■□□□□ 0.32
CTSB-228ENST00000533455 PRAMEF18Q5VWM3 479 aa17.05■□□□□ 0.32
CTSB-228ENST00000533455 METTL21CQ5VZV1 264 aa17.05■□□□□ 0.32
CTSB-228ENST00000533455 HPS6Q86YV9 775 aa17.05■□□□□ 0.32
CTSB-228ENST00000533455 APOBEC3FQ8IUX4 373 aaKnown RBP17.05■□□□□ 0.32
CTSB-228ENST00000533455 CCDC124Q96CT7 223 aaKnown RBP17.05■□□□□ 0.32
CTSB-228ENST00000533455 MRPL45Q9BRJ2 306 aaKnown RBP17.05■□□□□ 0.32
CTSB-228ENST00000533455 B3GNT5Q9BYG0 378 aa17.05■□□□□ 0.32
CTSB-228ENST00000533455 SYBUQ9NX95 663 aa17.05■□□□□ 0.32
CTSB-228ENST00000533455 SMIM31A0A1B0GVY4 71 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 TMEM114B3SHH9 223 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 ADCY6O43306 1168 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 STK10O94804 968 aaKnown RBP17.04■□□□□ 0.32
CTSB-228ENST00000533455 NCF2P19878 526 aaPredicted RBP17.04■□□□□ 0.32
CTSB-228ENST00000533455 TYK2P29597 1187 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 ATXN1P54253 815 aaKnown RBP17.04■□□□□ 0.32
CTSB-228ENST00000533455 SESN2P58004 480 aaPredicted RBP17.04■□□□□ 0.32
CTSB-228ENST00000533455 LSAMPQ13449 338 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 PDK3Q15120 406 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 LRRC36Q1X8D7 754 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 SLC5A9Q2M3M2 681 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 SPANXN3Q5MJ09 141 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 ARHGAP17Q68EM7 881 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 UGT2A3Q6UWM9 527 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 ACOT1Q86TX2 421 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 CCDC185Q8N715 623 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 NAT14Q8WUY8 206 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 CPB2Q96IY4 423 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 SPATA33Q96N06 139 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 MAGEB5Q9BZ81 275 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 SNX15Q9NRS6 342 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 GGA3Q9NZ52 723 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 NDUFA13Q9P0J0 144 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 MFHAS1Q9Y4C4 1052 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 ZBTB14O43829 449 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 CYP2C8P10632 490 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 ARF4P18085 180 aaPredicted RBP17.04■□□□□ 0.32
CTSB-228ENST00000533455 SERPINB6P35237 376 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 GLUD2P49448 558 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 SERPINB8P50452 374 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 CHN2P52757 468 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 MMEL1Q495T6 779 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 CERS2Q96G23 380 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 MPHOSPH6Q99547 160 aaKnown RBP17.04■□□□□ 0.32
CTSB-228ENST00000533455 SHCBP1LQ9BZQ2 653 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 SPATC1LQ9H0A9 340 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 FAM49BQ9NUQ9 324 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 C6orf203Q9P0P8 240 aaPredicted RBP17.04■□□□□ 0.32
CTSB-228ENST00000533455 PRPF19Q9UMS4 504 aaKnown RBP17.04■□□□□ 0.32
CTSB-228ENST00000533455 PSMD13Q9UNM6 376 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 NME7Q9Y5B8 376 aa17.04■□□□□ 0.32
CTSB-228ENST00000533455 A0A087WZ62 844 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 RNF103O00237 685 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 DCXO43602 365 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 MFSD11O43934 449 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 POLBP06746 335 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 GLDCP23378 1020 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 RPL34P49207 117 aaKnown RBP17.03■□□□□ 0.32
CTSB-228ENST00000533455 SNAPC2Q13487 334 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 TCHHL1Q5QJ38 904 aaPredicted RBP17.03■□□□□ 0.32
CTSB-228ENST00000533455 TREML2Q5T2D2 321 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 STRADAQ7RTN6 431 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 LINC01465Q8N7H1 131 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 ICA1LQ8NDH6 482 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 RBBP8Q99708 897 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 FDXACB1Q9BRP7 624 aaPredicted RBP17.03■□□□□ 0.32
CTSB-228ENST00000533455 RNPEPQ9H4A4 650 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 COG4Q9H9E3 785 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 TXNDC16Q9P2K2 825 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 NR2E3Q9Y5X4 410 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 ZNF638Q14966 1978 aaKnown RBP17.03■□□□□ 0.32
CTSB-228ENST00000533455 LOC100653049A0A140TA62 436 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 PDLIM1O00151 329 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 H2AFYO75367 372 aaKnown RBP17.03■□□□□ 0.32
CTSB-228ENST00000533455 KRT34O76011 436 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 GOT1P17174 413 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 ARL4AP40617 200 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 CLCN2P51788 898 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 FRG1Q14331 258 aaKnown RBP17.03■□□□□ 0.32
CTSB-228ENST00000533455 SOWAHAQ2M3V2 549 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 ZNF484Q5JVG2 852 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 FBXL19Q6PCT2 694 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 CLEC14AQ86T13 490 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 MARVELD2Q8N4S9 558 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 DCLK2Q8N568 766 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 ZNF781Q8N8C0 355 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 CLEC4CQ8WTT0 213 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 LGMNQ99538 433 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 IGSF9Q9P2J2 1179 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 DTNAQ9Y4J8 743 aa17.03■□□□□ 0.32
CTSB-228ENST00000533455 MCM3APO60318 1980 aa17.02■□□□□ 0.32
CTSB-228ENST00000533455 F5H423 210 aaPredicted RBP17.02■□□□□ 0.32
CTSB-228ENST00000533455 DENRO43583 198 aaKnown RBP17.02■□□□□ 0.32
CTSB-228ENST00000533455 ATP9BO43861 1147 aa17.02■□□□□ 0.32
CTSB-228ENST00000533455 SMIM18P0DKX4 95 aa17.02■□□□□ 0.32
CTSB-228ENST00000533455 PSMB4P28070 264 aa17.02■□□□□ 0.32
CTSB-228ENST00000533455 LIMK2P53671 638 aa17.02■□□□□ 0.32
CTSB-228ENST00000533455 FOLH1Q04609 750 aa17.02■□□□□ 0.32
CTSB-228ENST00000533455 PEX6Q13608 980 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms