RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 TRIM62Q9BVG3 475 aa11.73□□□□□ -0.53
CLCF1-202ENST00000533438 GTPBP2Q9BX10 602 aaKnown RBP11.73□□□□□ -0.53
CLCF1-202ENST00000533438 GPR174Q9BXC1 333 aa11.73□□□□□ -0.53
CLCF1-202ENST00000533438 NUCKS1Q9H1E3 243 aaKnown RBP11.73□□□□□ -0.53
CLCF1-202ENST00000533438 THAP9Q9H5L6 903 aa11.73□□□□□ -0.53
CLCF1-202ENST00000533438 POPDC2Q9HBU9 364 aa11.73□□□□□ -0.53
CLCF1-202ENST00000533438 DNAAF2Q9NVR5 837 aaKnown RBP11.73□□□□□ -0.53
CLCF1-202ENST00000533438 TJP2Q9UDY2 1190 aa11.73□□□□□ -0.53
CLCF1-202ENST00000533438 SUSD2Q9UGT4 822 aa11.73□□□□□ -0.53
CLCF1-202ENST00000533438 RALYQ9UKM9 306 aaKnown RBP11.73□□□□□ -0.53
CLCF1-202ENST00000533438 INTS6Q9UL03 887 aaKnown RBP11.73□□□□□ -0.53
CLCF1-202ENST00000533438 PLA2G4CQ9UP65 541 aa11.73□□□□□ -0.53
CLCF1-202ENST00000533438 CACNA1GO43497 2377 aa11.72□□□□□ -0.53
CLCF1-202ENST00000533438 OPHN1O60890 802 aa11.72□□□□□ -0.53
CLCF1-202ENST00000533438 CAPNS1P04632 268 aa11.72□□□□□ -0.53
CLCF1-202ENST00000533438 ATP5BP06576 529 aaKnown RBP11.72□□□□□ -0.53
CLCF1-202ENST00000533438 SYPP08247 313 aa11.72□□□□□ -0.53
CLCF1-202ENST00000533438 ACADMP11310 421 aa11.72□□□□□ -0.53
CLCF1-202ENST00000533438 PON1P27169 355 aa11.72□□□□□ -0.53
CLCF1-202ENST00000533438 ATXN3P54252 364 aaPredicted RBP11.72□□□□□ -0.53
CLCF1-202ENST00000533438 RPS24P62847 133 aaKnown RBP11.72□□□□□ -0.53
CLCF1-202ENST00000533438 YWHAZP63104 245 aaKnown RBP11.72□□□□□ -0.53
CLCF1-202ENST00000533438 TPM4P67936 248 aa11.72□□□□□ -0.53
CLCF1-202ENST00000533438 PITX1P78337 314 aaPredicted RBP11.72□□□□□ -0.53
CLCF1-202ENST00000533438 PDCLQ13371 301 aa11.72□□□□□ -0.53
CLCF1-202ENST00000533438 TPD52L1Q16890 204 aaPredicted RBP11.72□□□□□ -0.53
CLCF1-202ENST00000533438 ARHGAP44Q17R89 818 aa11.72□□□□□ -0.53
CLCF1-202ENST00000533438 EXOC3L4Q17RC7 722 aa11.72□□□□□ -0.53
CLCF1-202ENST00000533438 PLEKHG6Q3KR16 790 aa11.72□□□□□ -0.53
CLCF1-202ENST00000533438 DCAF12L1Q5VU92 463 aa11.72□□□□□ -0.53
CLCF1-202ENST00000533438 CDKAL1Q5VV42 579 aa11.72□□□□□ -0.53
CLCF1-202ENST00000533438 CACUL1Q86Y37 369 aa11.72□□□□□ -0.53
CLCF1-202ENST00000533438 MFN1Q8IWA4 741 aa11.72□□□□□ -0.53
CLCF1-202ENST00000533438 WDTC1Q8N5D0 677 aa11.72□□□□□ -0.53
CLCF1-202ENST00000533438 HJURPQ8NCD3 748 aaPredicted RBP11.72□□□□□ -0.53
CLCF1-202ENST00000533438 OR2I1PQ8NGU4 316 aa11.72□□□□□ -0.53
CLCF1-202ENST00000533438 TTC17Q96AE7 1141 aa11.72□□□□□ -0.53
CLCF1-202ENST00000533438 DDX50Q9BQ39 737 aaKnown RBP11.72□□□□□ -0.53
CLCF1-202ENST00000533438 NUP58Q9BVL2 599 aa11.72□□□□□ -0.53
CLCF1-202ENST00000533438 LHX5Q9H2C1 402 aa11.72□□□□□ -0.53
CLCF1-202ENST00000533438 FBRSQ9HAH7 460 aa11.72□□□□□ -0.53
CLCF1-202ENST00000533438 SIX2Q9NPC8 291 aa11.72□□□□□ -0.53
CLCF1-202ENST00000533438 PRSS16Q9NQE7 514 aa11.72□□□□□ -0.53
CLCF1-202ENST00000533438 SAMSN1Q9NSI8 373 aaKnown RBP11.72□□□□□ -0.53
CLCF1-202ENST00000533438 FANCLQ9NW38 375 aa11.72□□□□□ -0.53
CLCF1-202ENST00000533438 STIM2Q9P246 746 aa11.72□□□□□ -0.53
CLCF1-202ENST00000533438 XPO7Q9UIA9 1087 aaKnown RBP11.72□□□□□ -0.53
CLCF1-202ENST00000533438 AJAP1Q9UKB5 411 aaPredicted RBP11.72□□□□□ -0.53
CLCF1-202ENST00000533438 PCDHGC3Q9UN70 934 aa11.72□□□□□ -0.53
CLCF1-202ENST00000533438 TP53BP1Q12888 1972 aaPredicted RBP11.72□□□□□ -0.53
CLCF1-202ENST00000533438 TMEM131Q92545 1883 aa11.72□□□□□ -0.53
CLCF1-202ENST00000533438 ZFYVE26Q68DK2 2539 aa11.71□□□□□ -0.53
CLCF1-202ENST00000533438 A0A1B0GTW7 788 aa11.71□□□□□ -0.53
CLCF1-202ENST00000533438 TYW5A2RUC4 315 aaKnown RBP11.71□□□□□ -0.53
CLCF1-202ENST00000533438 MEI4A8MW99 385 aa11.71□□□□□ -0.53
CLCF1-202ENST00000533438 CAPN9O14815 690 aa11.71□□□□□ -0.53
CLCF1-202ENST00000533438 TRUB2O95900 331 aaKnown RBP11.71□□□□□ -0.53
CLCF1-202ENST00000533438 CD59P13987 128 aa11.71□□□□□ -0.53
CLCF1-202ENST00000533438 GNSP15586 552 aa11.71□□□□□ -0.53
CLCF1-202ENST00000533438 POLR2EP19388 210 aaKnown RBP11.71□□□□□ -0.53
CLCF1-202ENST00000533438 TAF5Q15542 800 aa11.71□□□□□ -0.53
CLCF1-202ENST00000533438 DCAF6Q58WW2 860 aa11.71□□□□□ -0.53
CLCF1-202ENST00000533438 FSCBQ5H9T9 825 aa11.71□□□□□ -0.53
CLCF1-202ENST00000533438 DPY19L2P1Q6NXN4 242 aa11.71□□□□□ -0.53
CLCF1-202ENST00000533438 CREBRFQ8IUR6 639 aa11.71□□□□□ -0.53
CLCF1-202ENST00000533438 CARNMT1Q8N4J0 409 aa11.71□□□□□ -0.53
CLCF1-202ENST00000533438 HDDC3Q8N4P3 179 aa11.71□□□□□ -0.53
CLCF1-202ENST00000533438 C1orf216Q8TAB5 229 aa11.71□□□□□ -0.53
CLCF1-202ENST00000533438 MRGPRX3Q96LB0 322 aa11.71□□□□□ -0.53
CLCF1-202ENST00000533438 SLC2A13Q96QE2 648 aa11.71□□□□□ -0.53
CLCF1-202ENST00000533438 CPXM1Q96SM3 734 aa11.71□□□□□ -0.53
CLCF1-202ENST00000533438 ADAM33Q9BZ11 813 aa11.71□□□□□ -0.53
CLCF1-202ENST00000533438 PCED1AQ9H1Q7 454 aa11.71□□□□□ -0.53
CLCF1-202ENST00000533438 SLC32A1Q9H598 525 aa11.71□□□□□ -0.53
CLCF1-202ENST00000533438 ASNSD1Q9NWL6 643 aa11.71□□□□□ -0.53
CLCF1-202ENST00000533438 LAMA5O15230 3695 aa11.71□□□□□ -0.54
CLCF1-202ENST00000533438 PLXNA2O75051 1894 aa11.7□□□□□ -0.54
CLCF1-202ENST00000533438 SRRM3A6NNA2 597 aaPredicted RBP11.7□□□□□ -0.54
CLCF1-202ENST00000533438 LUC7L3O95232 432 aaKnown RBP11.7□□□□□ -0.54
CLCF1-202ENST00000533438 MOCS2O96007 188 aaPredicted RBP11.7□□□□□ -0.54
CLCF1-202ENST00000533438 APOEP02649 317 aa11.7□□□□□ -0.54
CLCF1-202ENST00000533438 ASLP04424 464 aa11.7□□□□□ -0.54
CLCF1-202ENST00000533438 GLI1P08151 1106 aa11.7□□□□□ -0.54
CLCF1-202ENST00000533438 TACR2P21452 398 aa11.7□□□□□ -0.54
CLCF1-202ENST00000533438 ACSL1P33121 698 aa11.7□□□□□ -0.54
CLCF1-202ENST00000533438 CLCN1P35523 988 aa11.7□□□□□ -0.54
CLCF1-202ENST00000533438 USP8P40818 1118 aa11.7□□□□□ -0.54
CLCF1-202ENST00000533438 CSKP41240 450 aa11.7□□□□□ -0.54
CLCF1-202ENST00000533438 MTIF2P46199 727 aaKnown RBP11.7□□□□□ -0.54
CLCF1-202ENST00000533438 RPS14P62263 151 aaKnown RBP11.7□□□□□ -0.54
CLCF1-202ENST00000533438 ZBTB16Q05516 673 aa11.7□□□□□ -0.54
CLCF1-202ENST00000533438 FOXC1Q12948 553 aa11.7□□□□□ -0.54
CLCF1-202ENST00000533438 GRIK2Q13002 908 aa11.7□□□□□ -0.54
CLCF1-202ENST00000533438 SLC14A1Q13336 389 aa11.7□□□□□ -0.54
CLCF1-202ENST00000533438 CDH18Q13634 790 aa11.7□□□□□ -0.54
CLCF1-202ENST00000533438 ARID5BQ14865 1188 aa11.7□□□□□ -0.54
CLCF1-202ENST00000533438 MAN2A1Q16706 1144 aa11.7□□□□□ -0.54
CLCF1-202ENST00000533438 ZC3H12AQ5D1E8 599 aaKnown RBP11.7□□□□□ -0.54
CLCF1-202ENST00000533438 PITRM1Q5JRX3 1037 aa11.7□□□□□ -0.54
CLCF1-202ENST00000533438 MIIPQ5JXC2 388 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms