RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 NCOA4Q13772 614 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 E2F5Q15329 346 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 ARHGEF19Q8IW93 802 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 CACTIN-AS1Q8N1I8 211 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 C1orf127Q8N9H9 656 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 ZNF248Q8NDW4 579 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 MYCBPAPQ8TBZ2 947 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 MED8Q96G25 268 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 PCED1BQ96HM7 432 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 DNAJC7Q99615 494 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 BAG1Q99933 345 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 NAA15Q9BXJ9 866 aaKnown RBP11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 STK33Q9BYT3 514 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 MTMR12Q9C0I1 747 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 CRTAC1Q9NQ79 661 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 ABHD10Q9NUJ1 306 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 MARK1Q9P0L2 795 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 APEX2Q9UBZ4 518 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 AJAP1Q9UKB5 411 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 R3HCC1Q9Y3T6 440 aaKnown RBP11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 DAAM1Q9Y4D1 1078 aa11.83□□□□□ -0.52
TRAPPC4-213ENST00000533149 SPTA1P02549 2419 aa11.82□□□□□ -0.52
TRAPPC4-213ENST00000533149 LRRC53A6NM62 1247 aa11.82□□□□□ -0.52
TRAPPC4-213ENST00000533149 KCNK3O14649 394 aa11.82□□□□□ -0.52
TRAPPC4-213ENST00000533149 NRDCO43847 1150 aa11.82□□□□□ -0.52
TRAPPC4-213ENST00000533149 RTN3O95197 1032 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC4-213ENST00000533149 KRT19P08727 400 aa11.82□□□□□ -0.52
TRAPPC4-213ENST00000533149 LMO2P25791 158 aa11.82□□□□□ -0.52
TRAPPC4-213ENST00000533149 TUBP50607 506 aa11.82□□□□□ -0.52
TRAPPC4-213ENST00000533149 TRPC3Q13507 836 aa11.82□□□□□ -0.52
TRAPPC4-213ENST00000533149 RAPGEF1Q13905 1077 aa11.82□□□□□ -0.52
TRAPPC4-213ENST00000533149 LY6DQ14210 128 aa11.82□□□□□ -0.52
TRAPPC4-213ENST00000533149 FBXL19Q6PCT2 694 aa11.82□□□□□ -0.52
TRAPPC4-213ENST00000533149 HTR3DQ70Z44 454 aa11.82□□□□□ -0.52
TRAPPC4-213ENST00000533149 ERICH1Q86X53 443 aa11.82□□□□□ -0.52
TRAPPC4-213ENST00000533149 TMEM139Q8IV31 216 aa11.82□□□□□ -0.52
TRAPPC4-213ENST00000533149 ELMO3Q96BJ8 720 aa11.82□□□□□ -0.52
TRAPPC4-213ENST00000533149 CNDP2Q96KP4 475 aaKnown RBP11.82□□□□□ -0.52
TRAPPC4-213ENST00000533149 NT5C1BQ96P26 610 aa11.82□□□□□ -0.52
TRAPPC4-213ENST00000533149 SPAG5Q96R06 1193 aa11.82□□□□□ -0.52
TRAPPC4-213ENST00000533149 SEMA4CQ9C0C4 833 aa11.82□□□□□ -0.52
TRAPPC4-213ENST00000533149 NACA2Q9H009 215 aa11.82□□□□□ -0.52
TRAPPC4-213ENST00000533149 NUCKS1Q9H1E3 243 aaKnown RBP11.82□□□□□ -0.52
TRAPPC4-213ENST00000533149 TM9SF3Q9HD45 589 aa11.82□□□□□ -0.52
TRAPPC4-213ENST00000533149 ZNHIT6Q9NWK9 470 aaKnown RBP11.82□□□□□ -0.52
TRAPPC4-213ENST00000533149 COL5A1P20908 1838 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 CISD3P0C7P0 127 aa11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 FECHP22830 423 aa11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 HNRNPH3P31942 346 aaKnown RBP11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 STAT1P42224 750 aa11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 CTSKP43235 329 aa11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 CLDN6P56747 220 aa11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 PCBP4P57723 403 aaKnown RBP11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 MYL6P60660 151 aa11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 IL9RQ01113 521 aa11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 IFRD2Q12894 506 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 ILKQ13418 452 aa11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 DRAP1Q14919 205 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 MEA1Q16626 185 aa11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 ARHGAP44Q17R89 818 aa11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 SGSM1Q2NKQ1 1148 aa11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 ARHGAP40Q5TG30 622 aa11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 SFMBT2Q5VUG0 894 aa11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 SNX30Q5VWJ9 437 aa11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 SPOPLQ6IQ16 392 aa11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 WDR59Q6PJI9 974 aa11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 ADAT2Q7Z6V5 191 aaKnown RBP11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 TMTC1Q8IUR5 882 aa11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 NUP93Q8N1F7 819 aa11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 CCDC112Q8NEF3 446 aa11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 UCMAQ8WVF2 138 aa11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 SYN2Q92777 582 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 KAT5Q92993 513 aa11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 FBXO32Q969P5 355 aa11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 ELOVL4Q9GZR5 314 aa11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 APOBEC3GQ9HC16 384 aaKnown RBP11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 IL17BQ9UHF5 180 aa11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 SIX4Q9UIU6 781 aa11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 PYCARDQ9ULZ3 195 aa11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 MYO6Q9UM54 1294 aa11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC4-213ENST00000533149 A0A1B0GTQ1 180 aa11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 FOXN3O00409 490 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 ITGAVP06756 1048 aa11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 PDGFRBP09619 1106 aa11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 IRF1P10914 325 aa11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 WARSP23381 471 aaKnown RBP11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 CD27P26842 260 aa11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 ACADVLP49748 655 aa11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 MFAP3P55082 362 aa11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 CDH8P55286 799 aa11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 C21orf59P57076 290 aa11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 JAM2P57087 298 aa11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 DNAJC3Q13217 504 aa11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 ENPP2Q13822 863 aa11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 ASIC2Q16515 512 aa11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 E4F1Q66K89 784 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 TPGS1Q6ZTW0 290 aa11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 PRICKLE2Q7Z3G6 844 aa11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 LIMS2Q7Z4I7 341 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms