RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 NETO2Q8NC67 525 aa19.63■□□□□ 0.73
SMPD1-205ENST00000531303 FAF2Q96CS3 445 aa19.63■□□□□ 0.73
SMPD1-205ENST00000531303 ZFYVE19Q96K21 471 aa19.63■□□□□ 0.73
SMPD1-205ENST00000531303 PRICKLE1Q96MT3 831 aaPredicted RBP19.63■□□□□ 0.73
SMPD1-205ENST00000531303 FAM118BQ9BPY3 351 aa19.63■□□□□ 0.73
SMPD1-205ENST00000531303 AP1M1Q9BXS5 423 aa19.63■□□□□ 0.73
SMPD1-205ENST00000531303 PLA2G2FQ9BZM2 168 aa19.63■□□□□ 0.73
SMPD1-205ENST00000531303 ZYG11BQ9C0D3 744 aa19.63■□□□□ 0.73
SMPD1-205ENST00000531303 TRPV4Q9HBA0 871 aa19.63■□□□□ 0.73
SMPD1-205ENST00000531303 DUS2Q9NX74 493 aaKnown RBP19.63■□□□□ 0.73
SMPD1-205ENST00000531303 STOML2Q9UJZ1 356 aa19.63■□□□□ 0.73
SMPD1-205ENST00000531303 MRFAP1Q9Y605 127 aa19.63■□□□□ 0.73
SMPD1-205ENST00000531303 APOL1O14791 398 aa19.62■□□□□ 0.73
SMPD1-205ENST00000531303 PTPN7P35236 360 aa19.62■□□□□ 0.73
SMPD1-205ENST00000531303 ZNF135P52742 658 aaPredicted RBP19.62■□□□□ 0.73
SMPD1-205ENST00000531303 TFDP2Q14188 446 aa19.62■□□□□ 0.73
SMPD1-205ENST00000531303 GRM2Q14416 872 aa19.62■□□□□ 0.73
SMPD1-205ENST00000531303 LEXMQ3ZCV2 418 aa19.62■□□□□ 0.73
SMPD1-205ENST00000531303 ALFQ53S48 1182 aa19.62■□□□□ 0.73
SMPD1-205ENST00000531303 ACBD5Q5T8D3 534 aaPredicted RBP19.62■□□□□ 0.73
SMPD1-205ENST00000531303 VITQ6UXI7 678 aa19.62■□□□□ 0.73
SMPD1-205ENST00000531303 CCDC33Q8N5R6 958 aa19.62■□□□□ 0.73
SMPD1-205ENST00000531303 ACTRT1Q8TDG2 376 aa19.62■□□□□ 0.73
SMPD1-205ENST00000531303 FGF14Q92915 247 aa19.62■□□□□ 0.73
SMPD1-205ENST00000531303 TMA16Q96EY4 203 aaKnown RBP19.62■□□□□ 0.73
SMPD1-205ENST00000531303 RPGRIP1Q96KN7 1286 aa19.62■□□□□ 0.73
SMPD1-205ENST00000531303 TBC1D14Q9P2M4 693 aa19.62■□□□□ 0.73
SMPD1-205ENST00000531303 SAE1Q9UBE0 346 aaPredicted RBP19.62■□□□□ 0.73
SMPD1-205ENST00000531303 NEU3Q9UQ49 428 aa19.62■□□□□ 0.73
SMPD1-205ENST00000531303 DRGXA6NNA5 263 aa19.61■□□□□ 0.73
SMPD1-205ENST00000531303 ZNF487B1APH4 448 aa19.61■□□□□ 0.73
SMPD1-205ENST00000531303 SLC9A3R1O14745 358 aaPredicted RBP19.61■□□□□ 0.73
SMPD1-205ENST00000531303 TBL1XO60907 577 aa19.61■□□□□ 0.73
SMPD1-205ENST00000531303 MAP3K6O95382 1288 aa19.61■□□□□ 0.73
SMPD1-205ENST00000531303 CHKAP35790 457 aa19.61■□□□□ 0.73
SMPD1-205ENST00000531303 IFNAR2P48551 515 aa19.61■□□□□ 0.73
SMPD1-205ENST00000531303 TRIM68Q6AZZ1 485 aa19.61■□□□□ 0.73
SMPD1-205ENST00000531303 PTCRAQ6ISU1 281 aaPredicted RBP19.61■□□□□ 0.73
SMPD1-205ENST00000531303 NPNTQ6UXI9 565 aa19.61■□□□□ 0.73
SMPD1-205ENST00000531303 BBS12Q6ZW61 710 aa19.61■□□□□ 0.73
SMPD1-205ENST00000531303 VSIG1Q86XK7 387 aa19.61■□□□□ 0.73
SMPD1-205ENST00000531303 YAF2Q8IY57 180 aa19.61■□□□□ 0.73
SMPD1-205ENST00000531303 DDI1Q8WTU0 396 aa19.61■□□□□ 0.73
SMPD1-205ENST00000531303 RPP25Q9BUL9 199 aaKnown RBP19.61■□□□□ 0.73
SMPD1-205ENST00000531303 CATSPERBQ9H7T0 1116 aa19.61■□□□□ 0.73
SMPD1-205ENST00000531303 PLK2Q9NYY3 685 aa19.61■□□□□ 0.73
SMPD1-205ENST00000531303 PPARGC1AQ9UBK2 798 aaKnown RBP19.61■□□□□ 0.73
SMPD1-205ENST00000531303 HEY1Q9Y5J3 304 aa19.61■□□□□ 0.73
SMPD1-205ENST00000531303 IGLV3-10A0A075B6K4 115 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 C2CD4DB7Z1M9 353 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 DCLK1O15075 740 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 HTR7P34969 479 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 TUBB2AQ13885 445 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 WHAMMP3Q1A5X7 153 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 NCBP2-AS2Q69YL0 99 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 SLC9A4Q6AI14 798 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 TMCO3Q6UWJ1 677 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 TMEM25Q86YD3 366 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 FAM217AQ8IXS0 508 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 ZDHHC14Q8IZN3 488 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 CPXM2Q8N436 756 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 PLD5Q8N7P1 536 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 OSCP1Q8WVF1 389 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 E2F7Q96AV8 911 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 ELSPBP1Q96BH3 223 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 ASIC4Q96FT7 647 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 NAP1L3Q99457 506 aaPredicted RBP19.6■□□□□ 0.73
SMPD1-205ENST00000531303 TUBB2BQ9BVA1 445 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 THG1LQ9NWX6 298 aaKnown RBP19.6■□□□□ 0.73
SMPD1-205ENST00000531303 OBP2AQ9NY56 170 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 EPS15L1Q9UBC2 864 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 TTC7AQ9ULT0 858 aaPredicted RBP19.6■□□□□ 0.73
SMPD1-205ENST00000531303 EFR3BQ9Y2G0 817 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 R3HDM2Q9Y2K5 976 aaKnown RBP19.6■□□□□ 0.73
SMPD1-205ENST00000531303 NR2E1Q9Y466 385 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 TYW5A2RUC4 315 aaKnown RBP19.6■□□□□ 0.73
SMPD1-205ENST00000531303 KRIT1O00522 736 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 FGF10O15520 208 aaPredicted RBP19.6■□□□□ 0.73
SMPD1-205ENST00000531303 ARSAP15289 507 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 PECAM1P16284 738 aaPredicted RBP19.6■□□□□ 0.73
SMPD1-205ENST00000531303 RHOQP17081 205 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 HOXC13P31276 330 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 GBE1Q04446 702 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 KLF1Q13351 362 aaPredicted RBP19.6■□□□□ 0.73
SMPD1-205ENST00000531303 ANO4Q32M45 955 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 MTSS1LQ765P7 747 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 RTL3Q8N8U3 475 aaKnown RBP19.6■□□□□ 0.73
SMPD1-205ENST00000531303 HJURPQ8NCD3 748 aaPredicted RBP19.6■□□□□ 0.73
SMPD1-205ENST00000531303 C1orf54Q8WWF1 131 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 RSAD2Q8WXG1 361 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 P2RY11Q96G91 374 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 CELF6Q96J87 481 aaKnown RBP19.6■□□□□ 0.73
SMPD1-205ENST00000531303 PHF7Q9BWX1 381 aaPredicted RBP19.6■□□□□ 0.73
SMPD1-205ENST00000531303 NDFIP2Q9NV92 336 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 RNF14Q9UBS8 474 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 NUMBLQ9Y6R0 609 aa19.6■□□□□ 0.73
SMPD1-205ENST00000531303 XIRP2A4UGR9 3374 aa19.59■□□□□ 0.73
SMPD1-205ENST00000531303 MFSD11O43934 449 aa19.59■□□□□ 0.73
SMPD1-205ENST00000531303 CYBBP04839 570 aa19.59■□□□□ 0.73
SMPD1-205ENST00000531303 ZFXP17010 805 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms