RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 SCARA3Q6AZY7 606 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 TXNRD3NBQ6F5E7 133 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 TWF2Q6IBS0 349 aaKnown RBP5.76□□□□□ -1.49
PCF11-205ENST00000530906 ZNF449Q6P9G9 518 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 C6orf89Q6UWU4 347 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 CCDC121Q6ZUS5 278 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 CYS1Q717R9 158 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 MRPL10Q7Z7H8 261 aaKnown RBP5.76□□□□□ -1.49
PCF11-205ENST00000530906 SAPCD2Q86UD0 394 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 TRABD2AQ86V40 505 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 SERINC5Q86VE9 423 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 CCNJLQ8IV13 435 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 CCDC13Q8IYE1 715 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 ZBED8Q8IZ13 594 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 OTUD6BQ8N6M0 293 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 PLD5Q8N7P1 536 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 KLHL23Q8NBE8 558 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 PCSK9Q8NBP7 692 aaKnown RBP5.76□□□□□ -1.49
PCF11-205ENST00000530906 CCDC197Q8NCU1 140 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 SMG8Q8ND04 991 aaKnown RBP5.76□□□□□ -1.49
PCF11-205ENST00000530906 UBA3Q8TBC4 463 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 DYDC1Q8WWB3 177 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 CKAP2Q8WWK9 683 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 RSPH1Q8WYR4 309 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 IRGQQ8WZA9 623 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 CPT1BQ92523 772 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 MAML1Q92585 1016 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 HSPH1Q92598 858 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 NT5C3BQ969T7 300 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 NTAN1Q96AB6 310 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 PGBD4Q96DM1 585 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 PGAP3Q96FM1 320 aaPredicted RBP5.76□□□□□ -1.49
PCF11-205ENST00000530906 SEC16BQ96JE7 1060 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 MYRFLQ96LU7 910 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 PPP1R16BQ96T49 567 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 NAT9Q9BTE0 207 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 SNRNP25Q9BV90 132 aaKnown RBP5.76□□□□□ -1.49
PCF11-205ENST00000530906 SENP6Q9GZR1 1112 aaPredicted RBP5.76□□□□□ -1.49
PCF11-205ENST00000530906 ADAM19Q9H013 955 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 NGRNQ9NPE2 291 aaKnown RBP5.76□□□□□ -1.49
PCF11-205ENST00000530906 CNGB3Q9NQW8 809 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 EIF2B3Q9NR50 452 aaKnown RBP5.76□□□□□ -1.49
PCF11-205ENST00000530906 KLHL11Q9NVR0 708 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 FLRT1Q9NZU1 646 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 TJP2Q9UDY2 1190 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 PCSK1NQ9UHG2 260 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 ZNF180Q9UJW8 692 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 CDH9Q9ULB4 789 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 ZMYND8Q9ULU4 1186 aaPredicted RBP5.76□□□□□ -1.49
PCF11-205ENST00000530906 NAALADL1Q9UQQ1 740 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 GINS2Q9Y248 185 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 IQANK1A0A1B0GTG1 560 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 SMIM23A6NLE4 172 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 ERI2A8K979 691 aaKnown RBP5.75□□□□□ -1.49
PCF11-205ENST00000530906 DCDC2CA8MYV0 355 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 RASA4BC9J798 803 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 H7C0C1 242 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 AP3B1O00203 1094 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 CYB561D2O14569 222 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 PTGESO14684 152 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 PPEF2O14830 753 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 TM9SF1O15321 606 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 INPPL1O15357 1258 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 PAX4O43316 350 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 RASA4O43374 803 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 OPHN1O60890 802 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 SUN1O94901 812 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 ZWINTO95229 277 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 C6orf222P0C671 652 aaPredicted RBP5.75□□□□□ -1.49
PCF11-205ENST00000530906 FAM200BP0CF97 657 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 MLNP12872 115 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 BRAFP15056 766 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 PTPN1P18031 435 aaKnown RBP5.75□□□□□ -1.49
PCF11-205ENST00000530906 SPINK2P20155 84 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 CYP2B6P20813 491 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 CNTFP26441 200 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 L1CAMP32004 1257 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 CYP2C18P33260 490 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 FDFT1P37268 417 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 SLCO1A2P46721 670 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 ATP5OP48047 213 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 SEC24CP53992 1094 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 GP2P55259 537 aaKnown RBP5.75□□□□□ -1.49
PCF11-205ENST00000530906 HDAC4P56524 1084 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 YWHAZP63104 245 aaKnown RBP5.75□□□□□ -1.49
PCF11-205ENST00000530906 DYNLT1P63172 113 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 MRPS5P82675 430 aaKnown RBP5.75□□□□□ -1.49
PCF11-205ENST00000530906 ZNF33AQ06730 810 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 SLC20A2Q08357 652 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 DNAJC3Q13217 504 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 ORC1Q13415 861 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 NAB1Q13506 487 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 SPARCL1Q14515 664 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 LLGL1Q15334 1064 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 LACTB2Q53H82 288 aaPredicted RBP5.75□□□□□ -1.49
PCF11-205ENST00000530906 KCNT1Q5JUK3 1230 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 ARMC3Q5W041 872 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 CYP4F22Q6NT55 531 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 TRNP1Q6NT89 227 aa5.75□□□□□ -1.49
PCF11-205ENST00000530906 VSTM1Q6UX27 236 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms