RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	PCDHB18P	Q96TA0	734 aa		12.16	□□□□□ -0.46
PSMC3-205	ENST00000528362	TBCB	Q99426	244 aa		12.16	□□□□□ -0.46
PSMC3-205	ENST00000528362	RTN4	Q9NQC3	1192 aa	Known RBP	12.16	□□□□□ -0.46
PSMC3-205	ENST00000528362	ANLN	Q9NQW6	1124 aa		12.16	□□□□□ -0.46
PSMC3-205	ENST00000528362	VPS45	Q9NRW7	570 aa		12.16	□□□□□ -0.46
PSMC3-205	ENST00000528362	RXFP3	Q9NSD7	469 aa		12.16	□□□□□ -0.46
PSMC3-205	ENST00000528362	RRN3	Q9NYV6	651 aa		12.16	□□□□□ -0.46
PSMC3-205	ENST00000528362	USP36	Q9P275	1121 aa	Known RBP	12.16	□□□□□ -0.46
PSMC3-205	ENST00000528362	SLC12A6	Q9UHW9	1150 aa		12.16	□□□□□ -0.46
PSMC3-205	ENST00000528362	TMEM59L	Q9UK28	342 aa		12.16	□□□□□ -0.46
PSMC3-205	ENST00000528362	CDV3	Q9UKY7	258 aa	Known RBP	12.16	□□□□□ -0.46
PSMC3-205	ENST00000528362	CYP8B1	Q9UNU6	501 aa		12.16	□□□□□ -0.46
PSMC3-205	ENST00000528362	SDK1	Q7Z5N4	2213 aa		12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	SYCE3	A1L190	88 aa		12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	SMTNL1	A8MU46	457 aa		12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	MAP3K13	O43283	966 aa		12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	FOXD2	O60548	495 aa	Predicted RBP	12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	ADCY5	O95622	1261 aa		12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	CAVIN2	O95810	425 aa		12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	ATP5B	P06576	529 aa	Known RBP	12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	POLR2E	P19388	210 aa	Known RBP	12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	CSK	P41240	450 aa		12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	CXCR3	P49682	368 aa		12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	SULT1E1	P49888	294 aa		12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	IRAK1	P51617	712 aa		12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	ATXN1	P54253	815 aa	Known RBP	12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	CENPC	Q03188	943 aa		12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	CAMK2G	Q13555	558 aa	Predicted RBP	12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	AUH	Q13825	339 aa	Known RBP	12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	PUM1	Q14671	1186 aa	Known RBP eCLIP	12.15	□□□□□ -0.46	1e-10	■□□□□ 10.2
PSMC3-205	ENST00000528362	IQCB1	Q15051	598 aa		12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	SLC25A52	Q3SY17	297 aa		12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	AASDH	Q4L235	1098 aa	Predicted RBP	12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	PITRM1	Q5JRX3	1037 aa		12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	SLC36A4	Q6YBV0	504 aa		12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	TRIM72	Q6ZMU5	477 aa		12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	ARMCX6	Q7L4S7	300 aa		12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	BNIPL	Q7Z465	357 aa		12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	ZNF366	Q8N895	744 aa		12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	NETO1	Q8TDF5	533 aa		12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	IGSF8	Q969P0	613 aa		12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	MYO19	Q96H55	970 aa		12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	C11orf70	Q9BRQ4	267 aa		12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	PRDM16	Q9HAZ2	1276 aa		12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	ARHGEF38	Q9NXL2	777 aa		12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	STAP1	Q9ULZ2	295 aa		12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	PLA2G4C	Q9UP65	541 aa		12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362	HS3ST4	Q9Y661	456 aa		12.15	□□□□□ -0.46
PSMC3-205	ENST00000528362		A0A1B0GVM2	712 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	TCAF2	A6NFQ2	919 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362		H0Y626	953 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	PAGE1	O75459	146 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	UNG	P13051	313 aa	Predicted RBP	12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	CTSO	P43234	321 aa	Predicted RBP	12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	RPL6	Q02878	288 aa	Known RBP	12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	DEUP1	Q05D60	604 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	PTP4A2	Q12974	167 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	MTA1	Q13330	715 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	CLEC16A	Q2KHT3	1053 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	PLEKHG6	Q3KR16	790 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	SPDYC	Q5MJ68	293 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	BRMS1L	Q5PSV4	323 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	RABGAP1L	Q5R372	815 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	TTC39B	Q5VTQ0	682 aa	Predicted RBP	12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	LYSMD4	Q5XG99	296 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	CXorf57	Q6NSI4	855 aa	Known RBP	12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	ARC	Q7LC44	396 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	PHLDB2	Q86SQ0	1253 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	C14orf80	Q86SX3	495 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	METTL3	Q86U44	580 aa	Known RBP	12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	CACUL1	Q86Y37	369 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	TMPRSS6	Q8IU80	811 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	CCDC117	Q8IWD4	279 aa	Predicted RBP	12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	APCDD1	Q8J025	514 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	CCAR2	Q8N163	923 aa	Known RBP	12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	DEFB119	Q8N690	84 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	C12orf50	Q8NA57	414 aa	Predicted RBP	12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	OR2T3	Q8NH03	318 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	BAP1	Q92560	729 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	PIGK	Q92643	395 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	SIPA1	Q96FS4	1042 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	MRGPRX3	Q96LB0	322 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	CFAP57	Q96MR6	1250 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	RPRD1A	Q96P16	312 aa	Predicted RBP	12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	TKTL2	Q9H0I9	626 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	PRSS16	Q9NQE7	514 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	METTL5	Q9NRN9	209 aa	Known RBP	12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	TMPRSS4	Q9NRS4	437 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	KIAA1522	Q9P206	1035 aa	Predicted RBP	12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	VANGL2	Q9ULK5	521 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362	SNX10	Q9Y5X0	201 aa		12.14	□□□□□ -0.47
PSMC3-205	ENST00000528362		A0A1B0GTH6	734 aa		12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	PATE3	B3GLJ2	98 aa		12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	SLC30A4	O14863	429 aa		12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	AP5Z1	O43299	807 aa		12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	GJB6	O95452	261 aa		12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	F9	P00740	461 aa		12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	IGLV3-19	P01714	112 aa		12.13	□□□□□ -0.47
PSMC3-205	ENST00000528362	ASL	P04424	464 aa		12.13	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms