RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 RPL13P26373 211 aaKnown RBP10.31□□□□□ -0.76
CAPN1-210ENST00000527699 SLC6A4P31645 630 aa10.31□□□□□ -0.76
CAPN1-210ENST00000527699 HARS2P49590 506 aaKnown RBP10.31□□□□□ -0.76
CAPN1-210ENST00000527699 PNOCQ13519 176 aa10.31□□□□□ -0.76
CAPN1-210ENST00000527699 ENPP2Q13822 863 aa10.31□□□□□ -0.76
CAPN1-210ENST00000527699 TRIP4Q15650 581 aaPredicted RBP10.31□□□□□ -0.76
CAPN1-210ENST00000527699 SGO2Q562F6 1265 aa10.31□□□□□ -0.76
CAPN1-210ENST00000527699 BSPRYQ5W0U4 402 aa10.31□□□□□ -0.76
CAPN1-210ENST00000527699 ISM2Q6H9L7 571 aa10.31□□□□□ -0.76
CAPN1-210ENST00000527699 DHRS13Q6UX07 377 aa10.31□□□□□ -0.76
CAPN1-210ENST00000527699 KRBA2Q6ZNG9 492 aa10.31□□□□□ -0.76
CAPN1-210ENST00000527699 MMS22LQ6ZRQ5 1243 aa10.31□□□□□ -0.76
CAPN1-210ENST00000527699 METTL3Q86U44 580 aaKnown RBP10.31□□□□□ -0.76
CAPN1-210ENST00000527699 ADIPOR2Q86V24 386 aa10.31□□□□□ -0.76
CAPN1-210ENST00000527699 DHX40Q8IX18 779 aaKnown RBP10.31□□□□□ -0.76
CAPN1-210ENST00000527699 SIX6OS1Q8N1H7 587 aa10.31□□□□□ -0.76
CAPN1-210ENST00000527699 CPXM2Q8N436 756 aa10.31□□□□□ -0.76
CAPN1-210ENST00000527699 ANKRD52Q8NB46 1076 aa10.31□□□□□ -0.76
CAPN1-210ENST00000527699 FBXL13Q8NEE6 735 aa10.31□□□□□ -0.76
CAPN1-210ENST00000527699 SNX21Q969T3 373 aa10.31□□□□□ -0.76
CAPN1-210ENST00000527699 PLD4Q96BZ4 506 aa10.31□□□□□ -0.76
CAPN1-210ENST00000527699 BIRC7Q96CA5 298 aa10.31□□□□□ -0.76
CAPN1-210ENST00000527699 PHF12Q96QT6 1004 aa10.31□□□□□ -0.76
CAPN1-210ENST00000527699 LGMNQ99538 433 aa10.31□□□□□ -0.76
CAPN1-210ENST00000527699 ZDHHC5Q9C0B5 715 aa10.31□□□□□ -0.76
CAPN1-210ENST00000527699 DNAI2Q9GZS0 605 aa10.31□□□□□ -0.76
CAPN1-210ENST00000527699 MIS12Q9H081 205 aa10.31□□□□□ -0.76
CAPN1-210ENST00000527699 HESX1Q9UBX0 185 aa10.31□□□□□ -0.76
CAPN1-210ENST00000527699 ZDHHC9Q9Y397 364 aa10.31□□□□□ -0.76
CAPN1-210ENST00000527699 TRIM49BA6NDI0 452 aa10.3□□□□□ -0.76
CAPN1-210ENST00000527699 XPO1O14980 1071 aaKnown RBP10.3□□□□□ -0.76
CAPN1-210ENST00000527699 MAPK13O15264 365 aa10.3□□□□□ -0.76
CAPN1-210ENST00000527699 GABBR2O75899 941 aa10.3□□□□□ -0.76
CAPN1-210ENST00000527699 MOCS2O96007 188 aaPredicted RBP10.3□□□□□ -0.76
CAPN1-210ENST00000527699 EPB41P11171 864 aaKnown RBP10.3□□□□□ -0.76
CAPN1-210ENST00000527699 JUPP14923 745 aa10.3□□□□□ -0.76
CAPN1-210ENST00000527699 POLR2EP19388 210 aaKnown RBP10.3□□□□□ -0.76
CAPN1-210ENST00000527699 BRD2P25440 801 aaKnown RBP10.3□□□□□ -0.76
CAPN1-210ENST00000527699 CTSOP43234 321 aaPredicted RBP10.3□□□□□ -0.76
CAPN1-210ENST00000527699 SLC8A3P57103 927 aa10.3□□□□□ -0.76
CAPN1-210ENST00000527699 TMPRSS3P57727 454 aa10.3□□□□□ -0.76
CAPN1-210ENST00000527699 BST2Q10589 180 aaKnown RBP10.3□□□□□ -0.76
CAPN1-210ENST00000527699 CAMK2GQ13555 558 aaPredicted RBP10.3□□□□□ -0.76
CAPN1-210ENST00000527699 PTPRNQ16849 979 aa10.3□□□□□ -0.76
CAPN1-210ENST00000527699 PKDCCQ504Y2 493 aa10.3□□□□□ -0.76
CAPN1-210ENST00000527699 ARHGAP17Q68EM7 881 aa10.3□□□□□ -0.76
CAPN1-210ENST00000527699 HIST2H2BCQ6DN03 193 aa10.3□□□□□ -0.76
CAPN1-210ENST00000527699 PM20D1Q6GTS8 502 aa10.3□□□□□ -0.76
CAPN1-210ENST00000527699 ATG14Q6ZNE5 492 aa10.3□□□□□ -0.76
CAPN1-210ENST00000527699 CFAP52Q8N1V2 620 aa10.3□□□□□ -0.76
CAPN1-210ENST00000527699 GUF1Q8N442 669 aaKnown RBP10.3□□□□□ -0.76
CAPN1-210ENST00000527699 CARNMT1Q8N4J0 409 aa10.3□□□□□ -0.76
CAPN1-210ENST00000527699 C1orf216Q8TAB5 229 aa10.3□□□□□ -0.76
CAPN1-210ENST00000527699 SNIP1Q8TAD8 396 aaKnown RBP10.3□□□□□ -0.76
CAPN1-210ENST00000527699 TFAP2BQ92481 460 aa10.3□□□□□ -0.76
CAPN1-210ENST00000527699 FGF11Q92914 225 aa10.3□□□□□ -0.76
CAPN1-210ENST00000527699 KAT5Q92993 513 aa10.3□□□□□ -0.76
CAPN1-210ENST00000527699 LIN37Q96GY3 246 aaPredicted RBP10.3□□□□□ -0.76
CAPN1-210ENST00000527699 SLC6A18Q96N87 628 aa10.3□□□□□ -0.76
CAPN1-210ENST00000527699 CDC6Q99741 560 aa10.3□□□□□ -0.76
CAPN1-210ENST00000527699 BTBD1Q9H0C5 482 aa10.3□□□□□ -0.76
CAPN1-210ENST00000527699 SERGEFQ9UGK8 458 aa10.3□□□□□ -0.76
CAPN1-210ENST00000527699 USP25Q9UHP3 1055 aa10.3□□□□□ -0.76
CAPN1-210ENST00000527699 SPTBN1Q01082 2364 aaKnown RBP10.29□□□□□ -0.76
CAPN1-210ENST00000527699 A0A1W2PP55 124 aa10.29□□□□□ -0.76
CAPN1-210ENST00000527699 TTC34A8MYJ7 566 aa10.29□□□□□ -0.76
CAPN1-210ENST00000527699 RNF225M0QZC1 329 aaPredicted RBP10.29□□□□□ -0.76
CAPN1-210ENST00000527699 TERTO14746 1132 aaKnown RBP10.29□□□□□ -0.76
CAPN1-210ENST00000527699 WNT9AO14904 365 aa10.29□□□□□ -0.76
CAPN1-210ENST00000527699 NPC1O15118 1278 aa10.29□□□□□ -0.76
CAPN1-210ENST00000527699 CETN3O15182 167 aa10.29□□□□□ -0.76
CAPN1-210ENST00000527699 FLRT2O43155 660 aa10.29□□□□□ -0.76
CAPN1-210ENST00000527699 TIMM44O43615 452 aa10.29□□□□□ -0.76
CAPN1-210ENST00000527699 SIN3BO75182 1162 aa10.29□□□□□ -0.76
CAPN1-210ENST00000527699 ZNF202O95125 648 aa10.29□□□□□ -0.76
CAPN1-210ENST00000527699 PRCPP42785 496 aa10.29□□□□□ -0.76
CAPN1-210ENST00000527699 AFF3P51826 1226 aaKnown RBP10.29□□□□□ -0.76
CAPN1-210ENST00000527699 PMS1P54277 932 aaKnown RBP10.29□□□□□ -0.76
CAPN1-210ENST00000527699 BCAT1P54687 386 aa10.29□□□□□ -0.76
CAPN1-210ENST00000527699 C21orf59P57076 290 aa10.29□□□□□ -0.76
CAPN1-210ENST00000527699 NFKB2Q00653 900 aa10.29□□□□□ -0.76
CAPN1-210ENST00000527699 DNAJC3Q13217 504 aa10.29□□□□□ -0.76
CAPN1-210ENST00000527699 CUL2Q13617 745 aa10.29□□□□□ -0.76
CAPN1-210ENST00000527699 EIF4HQ15056 248 aaKnown RBP10.29□□□□□ -0.76
CAPN1-210ENST00000527699 TEAD4Q15561 434 aa10.29□□□□□ -0.76
CAPN1-210ENST00000527699 SMAD1Q15797 465 aaKnown RBP10.29□□□□□ -0.76
CAPN1-210ENST00000527699 SKOR2Q2VWA4 1001 aaPredicted RBP10.29□□□□□ -0.76
CAPN1-210ENST00000527699 ZCWPW2Q504Y3 356 aa10.29□□□□□ -0.76
CAPN1-210ENST00000527699 ANKRD40Q6AI12 368 aa10.29□□□□□ -0.76
CAPN1-210ENST00000527699 ATL3Q6DD88 541 aa10.29□□□□□ -0.76
CAPN1-210ENST00000527699 NADSYN1Q6IA69 706 aa10.29□□□□□ -0.76
CAPN1-210ENST00000527699 IL27RAQ6UWB1 636 aa10.29□□□□□ -0.76
CAPN1-210ENST00000527699 MFN1Q8IWA4 741 aa10.29□□□□□ -0.76
CAPN1-210ENST00000527699 FAM217AQ8IXS0 508 aa10.29□□□□□ -0.76
CAPN1-210ENST00000527699 AHI1Q8N157 1196 aa10.29□□□□□ -0.76
CAPN1-210ENST00000527699 ZNF276Q8N554 614 aa10.29□□□□□ -0.76
CAPN1-210ENST00000527699 BAHD1Q8TBE0 780 aaPredicted RBP10.29□□□□□ -0.76
CAPN1-210ENST00000527699 TMEM174Q8WUU8 243 aa10.29□□□□□ -0.76
CAPN1-210ENST00000527699 GBP4Q96PP9 640 aa10.29□□□□□ -0.76
CAPN1-210ENST00000527699 SLC2A11Q9BYW1 496 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms