RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 MPP5Q8N3R9 675 aa15.7■□□□□ 0.1
BEST1-204ENST00000524926 SIGLEC10Q96LC7 697 aa15.7■□□□□ 0.1
BEST1-204ENST00000524926 TTPALQ9BTX7 342 aa15.7■□□□□ 0.1
BEST1-204ENST00000524926 SENP1Q9P0U3 644 aa15.7■□□□□ 0.1
BEST1-204ENST00000524926 MTMR11A4FU01 709 aa15.69■□□□□ 0.1
BEST1-204ENST00000524926 PARNO95453 639 aaKnown RBP15.69■□□□□ 0.1
BEST1-204ENST00000524926 VIMP08670 466 aaKnown RBP15.69■□□□□ 0.1
BEST1-204ENST00000524926 YWHAQP27348 245 aa15.69■□□□□ 0.1
BEST1-204ENST00000524926 MAGEA3P43357 314 aa15.69■□□□□ 0.1
BEST1-204ENST00000524926 ALDH7A1P49419 539 aaKnown RBP15.69■□□□□ 0.1
BEST1-204ENST00000524926 CDK16Q00536 496 aa15.69■□□□□ 0.1
BEST1-204ENST00000524926 GALNT2Q10471 571 aa15.69■□□□□ 0.1
BEST1-204ENST00000524926 GPR17Q13304 367 aa15.69■□□□□ 0.1
BEST1-204ENST00000524926 PPP2R5DQ14738 602 aa15.69■□□□□ 0.1
BEST1-204ENST00000524926 QPCTQ16769 361 aa15.69■□□□□ 0.1
BEST1-204ENST00000524926 FAM43BQ6ZT52 329 aaPredicted RBP15.69■□□□□ 0.1
BEST1-204ENST00000524926 PRPF39Q86UA1 669 aaKnown RBP15.69■□□□□ 0.1
BEST1-204ENST00000524926 CTAGE3PQ8IX95 158 aa15.69■□□□□ 0.1
BEST1-204ENST00000524926 ARHGAP18Q8N392 663 aa15.69■□□□□ 0.1
BEST1-204ENST00000524926 SPPL2BQ8TCT7 592 aa15.69■□□□□ 0.1
BEST1-204ENST00000524926 DCAKDQ8WVC6 231 aa15.69■□□□□ 0.1
BEST1-204ENST00000524926 HDAC11Q96DB2 347 aa15.69■□□□□ 0.1
BEST1-204ENST00000524926 AGAP3Q96P47 875 aa15.69■□□□□ 0.1
BEST1-204ENST00000524926 ZNF317Q96PQ6 595 aaPredicted RBP15.69■□□□□ 0.1
BEST1-204ENST00000524926 DHRS4Q9BTZ2 278 aa15.69■□□□□ 0.1
BEST1-204ENST00000524926 BRD8Q9H0E9 1235 aa15.69■□□□□ 0.1
BEST1-204ENST00000524926 PIH1D1Q9NWS0 290 aaKnown RBP15.69■□□□□ 0.1
BEST1-204ENST00000524926 COL4A4P53420 1690 aaPredicted RBP15.69■□□□□ 0.1
BEST1-204ENST00000524926 FAM47DPA6NHR8 397 aa15.69■□□□□ 0.1
BEST1-204ENST00000524926 H7C4K7 107 aa15.69■□□□□ 0.1
BEST1-204ENST00000524926 INHBAP08476 426 aa15.69■□□□□ 0.1
BEST1-204ENST00000524926 DUSP4Q13115 394 aa15.69■□□□□ 0.1
BEST1-204ENST00000524926 CASC4Q6P4E1 433 aa15.69■□□□□ 0.1
BEST1-204ENST00000524926 PRSS55Q6UWB4 352 aaPredicted RBP15.69■□□□□ 0.1
BEST1-204ENST00000524926 ANKS3Q6ZW76 656 aa15.69■□□□□ 0.1
BEST1-204ENST00000524926 BCL7CQ8WUZ0 217 aaPredicted RBP15.69■□□□□ 0.1
BEST1-204ENST00000524926 FBXO32Q969P5 355 aa15.69■□□□□ 0.1
BEST1-204ENST00000524926 EBNA1BP2Q99848 306 aaKnown RBP15.69■□□□□ 0.1
BEST1-204ENST00000524926 PAIP2Q9BPZ3 127 aaKnown RBP15.69■□□□□ 0.1
BEST1-204ENST00000524926 TRIM56Q9BRZ2 755 aaKnown RBP15.69■□□□□ 0.1
BEST1-204ENST00000524926 ZMYND15Q9H091 742 aa15.69■□□□□ 0.1
BEST1-204ENST00000524926 CRISPLD1Q9H336 500 aa15.69■□□□□ 0.1
BEST1-204ENST00000524926 IGSF9Q9P2J2 1179 aa15.69■□□□□ 0.1
BEST1-204ENST00000524926 MRPL42Q9Y6G3 142 aaKnown RBP15.69■□□□□ 0.1
BEST1-204ENST00000524926 DFFAO00273 331 aa15.68■□□□□ 0.1
BEST1-204ENST00000524926 ZNF189O75820 626 aaPredicted RBP15.68■□□□□ 0.1
BEST1-204ENST00000524926 KRT4P19013 534 aa15.68■□□□□ 0.1
BEST1-204ENST00000524926 DRD4P21917 467 aa15.68■□□□□ 0.1
BEST1-204ENST00000524926 GBP2P32456 591 aaPredicted RBP15.68■□□□□ 0.1
BEST1-204ENST00000524926 SESN2P58004 480 aaPredicted RBP15.68■□□□□ 0.1
BEST1-204ENST00000524926 UNC5AQ6ZN44 842 aa15.68■□□□□ 0.1
BEST1-204ENST00000524926 PPM1NQ8N819 430 aa15.68■□□□□ 0.1
BEST1-204ENST00000524926 CCDC134Q9H6E4 229 aa15.68■□□□□ 0.1
BEST1-204ENST00000524926 CATSPERBQ9H7T0 1116 aa15.68■□□□□ 0.1
BEST1-204ENST00000524926 CDY1Q9Y6F8 540 aa15.68■□□□□ 0.1
BEST1-204ENST00000524926 ZBTB24O43167 697 aaPredicted RBP15.68■□□□□ 0.1
BEST1-204ENST00000524926 MTSS1O43312 755 aa15.68■□□□□ 0.1
BEST1-204ENST00000524926 TUBP50607 506 aa15.68■□□□□ 0.1
BEST1-204ENST00000524926 EFEMP1Q12805 493 aa15.68■□□□□ 0.1
BEST1-204ENST00000524926 TAF10Q12962 218 aa15.68■□□□□ 0.1
BEST1-204ENST00000524926 IKBKEQ14164 716 aa15.68■□□□□ 0.1
BEST1-204ENST00000524926 SPARCL1Q14515 664 aa15.68■□□□□ 0.1
BEST1-204ENST00000524926 LRRC8BQ6P9F7 803 aa15.68■□□□□ 0.1
BEST1-204ENST00000524926 LRRC34Q8IZ02 419 aa15.68■□□□□ 0.1
BEST1-204ENST00000524926 SLC44A1Q8WWI5 657 aa15.68■□□□□ 0.1
BEST1-204ENST00000524926 TBC1D31Q96DN5 1066 aa15.68■□□□□ 0.1
BEST1-204ENST00000524926 EIF2B3Q9NR50 452 aaKnown RBP15.68■□□□□ 0.1
BEST1-204ENST00000524926 TLR6Q9Y2C9 796 aa15.68■□□□□ 0.1
BEST1-204ENST00000524926 ATP11BQ9Y2G3 1177 aa15.68■□□□□ 0.1
BEST1-204ENST00000524926 TTLL3Q9Y4R7 772 aa15.68■□□□□ 0.1
BEST1-204ENST00000524926 KCNU1A8MYU2 1149 aa15.67■□□□□ 0.1
BEST1-204ENST00000524926 TRDMT1O14717 391 aaKnown RBP15.67■□□□□ 0.1
BEST1-204ENST00000524926 TBC1D4O60343 1298 aa15.67■□□□□ 0.1
BEST1-204ENST00000524926 RTN3O95197 1032 aaPredicted RBP15.67■□□□□ 0.1
BEST1-204ENST00000524926 TBX18O95935 607 aa15.67■□□□□ 0.1
BEST1-204ENST00000524926 APOEP02649 317 aa15.67■□□□□ 0.1
BEST1-204ENST00000524926 MLNP12872 115 aa15.67■□□□□ 0.1
BEST1-204ENST00000524926 MNX1P50219 401 aaPredicted RBP15.67■□□□□ 0.1
BEST1-204ENST00000524926 TBX4P57082 545 aa15.67■□□□□ 0.1
BEST1-204ENST00000524926 CRADDP78560 199 aa15.67■□□□□ 0.1
BEST1-204ENST00000524926 TOX2Q96NM4 488 aa15.67■□□□□ 0.1
BEST1-204ENST00000524926 PLAC1Q9HBJ0 212 aa15.67■□□□□ 0.1
BEST1-204ENST00000524926 HS3ST4Q9Y661 456 aa15.67■□□□□ 0.1
BEST1-204ENST00000524926 SHROOM3Q8TF72 1996 aa15.67■□□□□ 0.1
BEST1-204ENST00000524926 FNDC1Q4ZHG4 1894 aaPredicted RBP15.67■□□□□ 0.1
BEST1-204ENST00000524926 MKI67P46013 3256 aaKnown RBP15.67■□□□□ 0.1
BEST1-204ENST00000524926 IQANK1A0A1B0GTG1 560 aa15.67■□□□□ 0.1
BEST1-204ENST00000524926 WDR27A2RRH5 827 aa15.67■□□□□ 0.1
BEST1-204ENST00000524926 SDR42E2A6NKP2 422 aa15.67■□□□□ 0.1
BEST1-204ENST00000524926 CA4P22748 312 aa15.67■□□□□ 0.1
BEST1-204ENST00000524926 COG7P83436 770 aa15.67■□□□□ 0.1
BEST1-204ENST00000524926 SMARCB1Q12824 385 aa15.67■□□□□ 0.1
BEST1-204ENST00000524926 ZBTB17Q13105 803 aa15.67■□□□□ 0.1
BEST1-204ENST00000524926 TEX44Q53QW1 395 aa15.67■□□□□ 0.1
BEST1-204ENST00000524926 GKAP1Q5VSY0 366 aaPredicted RBP15.67■□□□□ 0.1
BEST1-204ENST00000524926 LRRC6Q86X45 466 aa15.67■□□□□ 0.1
BEST1-204ENST00000524926 MIB1Q86YT6 1006 aa15.67■□□□□ 0.1
BEST1-204ENST00000524926 GSDMBQ8TAX9 411 aa15.67■□□□□ 0.1
BEST1-204ENST00000524926 GIPC2Q8TF65 315 aa15.67■□□□□ 0.1
BEST1-204ENST00000524926 STAMBPL1Q96FJ0 436 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms