RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 NAXDQ8IW45 347 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 CMTM8Q8IZV2 173 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 CCDC33Q8N5R6 958 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 ZSWIM2Q8NEG5 633 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 PIP4K2CQ8TBX8 421 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 USP33Q8TEY7 942 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 IPO9Q96P70 1041 aaKnown RBP6.84□□□□□ -1.31
VPS13B-211ENST00000522802 HSD17B14Q9BPX1 270 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 C22orf23Q9BZE7 217 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 C2orf40Q9H1Z8 148 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 ANKEF1Q9NU02 776 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 SLC38A7Q9NVC3 462 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 FAM53CQ9NYF3 392 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.84□□□□□ -1.31
VPS13B-211ENST00000522802 GULP1Q9UBP9 304 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 TPCN1Q9ULQ1 816 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 KCNJ14Q9UNX9 436 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 WNT6Q9Y6F9 365 aa6.84□□□□□ -1.31
VPS13B-211ENST00000522802 TEX15Q9BXT5 2789 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 K7EQS6 105 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 M0QZQ0 153 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 MARCH6O60337 910 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 GJB3O75712 270 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 OAZ2O95190 189 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 FGF19O95750 216 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 KCNE1P15382 129 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 GCFC2P16383 781 aaKnown RBP6.83□□□□□ -1.32
VPS13B-211ENST00000522802 RDXP35241 583 aaKnown RBP6.83□□□□□ -1.32
VPS13B-211ENST00000522802 NAMPTP43490 491 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 ATXN3P54252 364 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-211ENST00000522802 CCT2P78371 535 aaKnown RBP6.83□□□□□ -1.32
VPS13B-211ENST00000522802 MESP2Q0VG99 397 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 BFSP1Q12934 665 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 CRY1Q16526 586 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 ZNF568Q3ZCX4 644 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 OGFOD2Q6N063 350 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 CPA6Q8N4T0 437 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 LZTR1Q8N653 840 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 DEFB119Q8N690 84 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 MAB21L3Q8N8X9 362 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 APPL2Q8NEU8 664 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 OR10T2Q8NGX3 314 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 DEPTORQ8TB45 409 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 PLEKHO2Q8TD55 490 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 CD101Q93033 1021 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 GCNAQ96QF7 691 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 SEPT5Q99719 369 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-211ENST00000522802 ECT2Q9H8V3 914 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 POLD4Q9HCU8 107 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 TNFRSF12AQ9NP84 129 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 ZDHHC4Q9NPG8 344 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 TOPORSQ9NS56 1045 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-211ENST00000522802 DKK4Q9UBT3 224 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 FBLN5Q9UBX5 448 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 MMP17Q9ULZ9 603 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 ANAPC1Q9H1A4 1944 aa6.83□□□□□ -1.32
VPS13B-211ENST00000522802 BOD1L1Q8NFC6 3051 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 OR6C75A6NL08 312 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 ABLIM1O14639 778 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 PPEF2O14830 753 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 DTNBO60941 627 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 TADA3O75528 432 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 SERPINF2P08697 491 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 GLI4P10075 376 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 HARSP12081 509 aaKnown RBP6.82□□□□□ -1.32
VPS13B-211ENST00000522802 ITPKBP27987 946 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 CDC25CP30307 473 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 RPL9P32969 192 aaKnown RBP6.82□□□□□ -1.32
VPS13B-211ENST00000522802 HSPA4P34932 840 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 AVPR1AP37288 418 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 OPRD1P41143 372 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 RPL11P62913 178 aaKnown RBP6.82□□□□□ -1.32
VPS13B-211ENST00000522802 GFPT1Q06210 699 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-211ENST00000522802 SPAG1Q07617 926 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 GPR17Q13304 367 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 MTF1Q14872 753 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 PDGFRLQ15198 375 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 ZNF77Q15935 545 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 TXNDC8Q6A555 127 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 MPZL3Q6UWV2 235 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 PIK3AP1Q6ZUJ8 805 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 TOGARAM2Q6ZUX3 1019 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 ZNF605Q86T29 641 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 ITIH5Q86UX2 942 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 Q8N1Y9 231 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 ALLCQ8N6M5 410 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 MCPH1Q8NEM0 835 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 HMGB4Q8WW32 186 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 PTPRN2Q92932 1015 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 SLC22A12Q96S37 553 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 ZFYVE21Q9BQ24 234 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 CCDC94Q9BW85 323 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-211ENST00000522802 CDIP1Q9H305 208 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 ZNF552Q9H707 407 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-211ENST00000522802 KIF9Q9HAQ2 790 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 GJB4Q9NTQ9 266 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 TDP1Q9NUW8 608 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 TNFSF13BQ9Y275 285 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 ASB3Q9Y575 518 aa6.82□□□□□ -1.32
VPS13B-211ENST00000522802 GOLGA4Q13439 2230 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms