RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 LRRC1Q9BTT6 524 aa12.78□□□□□ -0.36
PABPC1-219ENST00000522387 RASSF4Q9H2L5 321 aa12.78□□□□□ -0.36
PABPC1-219ENST00000522387 PCDH18Q9HCL0 1135 aa12.78□□□□□ -0.36
PABPC1-219ENST00000522387 ETNK2Q9NVF9 386 aa12.78□□□□□ -0.36
PABPC1-219ENST00000522387 SLC12A6Q9UHW9 1150 aa12.78□□□□□ -0.36
PABPC1-219ENST00000522387 CDH7Q9ULB5 785 aa12.78□□□□□ -0.36
PABPC1-219ENST00000522387 HPCAL4Q9UM19 191 aa12.78□□□□□ -0.36
PABPC1-219ENST00000522387 HBS1LQ9Y450 684 aaKnown RBP12.78□□□□□ -0.36
PABPC1-219ENST00000522387 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.77□□□□□ -0.36
PABPC1-219ENST00000522387 MBTPS2O43462 519 aa12.77□□□□□ -0.36
PABPC1-219ENST00000522387 SYF2O95926 243 aaKnown RBP12.77□□□□□ -0.36
PABPC1-219ENST00000522387 IGLV3-27P01718 113 aa12.77□□□□□ -0.36
PABPC1-219ENST00000522387 LAMP2P13473 410 aa12.77□□□□□ -0.36
PABPC1-219ENST00000522387 AMPD1P23109 780 aa12.77□□□□□ -0.36
PABPC1-219ENST00000522387 TNK2Q07912 1038 aa12.77□□□□□ -0.36
PABPC1-219ENST00000522387 DPYSL3Q14195 570 aa12.77□□□□□ -0.36
PABPC1-219ENST00000522387 PPP2R5DQ14738 602 aa12.77□□□□□ -0.36
PABPC1-219ENST00000522387 COL19A1Q14993 1142 aa12.77□□□□□ -0.36
PABPC1-219ENST00000522387 FAM133BQ5BKY9 247 aaKnown RBP12.77□□□□□ -0.36
PABPC1-219ENST00000522387 FBXL22Q6P050 247 aa12.77□□□□□ -0.36
PABPC1-219ENST00000522387 UNC45BQ8IWX7 931 aa12.77□□□□□ -0.36
PABPC1-219ENST00000522387 LGI2Q8N0V4 545 aa12.77□□□□□ -0.36
PABPC1-219ENST00000522387 ATP6V0D2Q8N8Y2 350 aa12.77□□□□□ -0.36
PABPC1-219ENST00000522387 SMARCD2Q92925 531 aa12.77□□□□□ -0.36
PABPC1-219ENST00000522387 IGSF8Q969P0 613 aa12.77□□□□□ -0.36
PABPC1-219ENST00000522387 P2RY11Q96G91 374 aa12.77□□□□□ -0.36
PABPC1-219ENST00000522387 PLA2G2FQ9BZM2 168 aa12.77□□□□□ -0.36
PABPC1-219ENST00000522387 RBM12Q9NTZ6 932 aaKnown RBP12.77□□□□□ -0.36
PABPC1-219ENST00000522387 ARHGAP26Q9UNA1 814 aa12.77□□□□□ -0.36
PABPC1-219ENST00000522387 DNAH14Q0VDD8 3507 aa12.77□□□□□ -0.37
PABPC1-219ENST00000522387 NUP205Q92621 2012 aa12.77□□□□□ -0.37
PABPC1-219ENST00000522387 HEPACAM2A8MVW5 462 aa12.77□□□□□ -0.37
PABPC1-219ENST00000522387 MIF4GDA9UHW6 222 aaKnown RBP12.77□□□□□ -0.37
PABPC1-219ENST00000522387 EEF2KO00418 725 aaKnown RBP12.77□□□□□ -0.37
PABPC1-219ENST00000522387 ACSL4O60488 711 aa12.77□□□□□ -0.37
PABPC1-219ENST00000522387 GREM1O60565 184 aa12.77□□□□□ -0.37
PABPC1-219ENST00000522387 CNTN5O94779 1100 aa12.77□□□□□ -0.37
PABPC1-219ENST00000522387 FGGP02679 453 aa12.77□□□□□ -0.37
PABPC1-219ENST00000522387 SLC2A3P11169 496 aa12.77□□□□□ -0.37
PABPC1-219ENST00000522387 IL9P15248 144 aa12.77□□□□□ -0.37
PABPC1-219ENST00000522387 IL4RP24394 825 aa12.77□□□□□ -0.37
PABPC1-219ENST00000522387 WEE1P30291 646 aa12.77□□□□□ -0.37
PABPC1-219ENST00000522387 MTHFRP42898 656 aa12.77□□□□□ -0.37
PABPC1-219ENST00000522387 SLC11A2P49281 568 aa12.77□□□□□ -0.37
PABPC1-219ENST00000522387 BRMS1LQ5PSV4 323 aa12.77□□□□□ -0.37
PABPC1-219ENST00000522387 POLNQ7Z5Q5 900 aa12.77□□□□□ -0.37
PABPC1-219ENST00000522387 TP53INP2Q8IXH6 220 aa12.77□□□□□ -0.37
PABPC1-219ENST00000522387 ASIC4Q96FT7 647 aa12.77□□□□□ -0.37
PABPC1-219ENST00000522387 CALR3Q96L12 384 aaKnown RBP12.77□□□□□ -0.37
PABPC1-219ENST00000522387 AP1M1Q9BXS5 423 aa12.77□□□□□ -0.37
PABPC1-219ENST00000522387 NDFIP2Q9NV92 336 aa12.77□□□□□ -0.37
PABPC1-219ENST00000522387 DMGDHQ9UI17 866 aaKnown RBP12.77□□□□□ -0.37
PABPC1-219ENST00000522387 LSM7Q9UK45 103 aaKnown RBP12.77□□□□□ -0.37
PABPC1-219ENST00000522387 C3orf70A6NLC5 250 aaPredicted RBP12.76□□□□□ -0.37
PABPC1-219ENST00000522387 E9PAM4 449 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 ASGR2P07307 311 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 DDX6P26196 483 aaKnown RBP eCLIP12.76□□□□□ -0.375e-38■■□□□ 11.5
PABPC1-219ENST00000522387 CTNNA2P26232 953 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 KPNA1P52294 538 aaPredicted RBP12.76□□□□□ -0.37
PABPC1-219ENST00000522387 TPI1P60174 286 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 RING1Q06587 406 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 ALFQ53S48 1182 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 NPNTQ6UXI9 565 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 LRRC31Q6UY01 552 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 RFX6Q8HWS3 928 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 KATNAL2Q8IYT4 538 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 ZNF276Q8N554 614 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 PLD4Q96BZ4 506 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 EBF3Q9H4W6 596 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 ZFP14Q9HCL3 533 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 LIMD1Q9UGP4 676 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 HEY1Q9Y5J3 304 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 C2CD4DB7Z1M9 353 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 POU2F2P09086 479 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 ARL4AP40617 200 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 MLLT6P55198 1093 aaPredicted RBP12.76□□□□□ -0.37
PABPC1-219ENST00000522387 DPYSL2Q16555 572 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 ANO4Q32M45 955 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 ANKRD20A8PQ5CZ79 823 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 TFDP3Q5H9I0 405 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 ADGRF1Q5T601 910 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 PTCRAQ6ISU1 281 aaPredicted RBP12.76□□□□□ -0.37
PABPC1-219ENST00000522387 C1orf228Q6PIY5 440 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 SPOCD1Q6ZMY3 1216 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 CELF5Q8N6W0 485 aaKnown RBP12.76□□□□□ -0.37
PABPC1-219ENST00000522387 NAT16Q8N8M0 369 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 DDI1Q8WTU0 396 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 SUSD6Q92537 303 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 CSPG4P5Q96PW8 444 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 MAK16Q9BXY0 300 aaKnown RBP12.76□□□□□ -0.37
PABPC1-219ENST00000522387 C10orf88Q9H8K7 445 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 GDE1Q9NZC3 331 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 NR2E1Q9Y466 385 aa12.76□□□□□ -0.37
PABPC1-219ENST00000522387 ZFP37Q9Y6Q3 630 aaPredicted RBP12.76□□□□□ -0.37
PABPC1-219ENST00000522387 MYO15AQ9UKN7 3530 aa12.75□□□□□ -0.37
PABPC1-219ENST00000522387 ZSCAN5CA6NGD5 496 aaPredicted RBP12.75□□□□□ -0.37
PABPC1-219ENST00000522387 OTOL1A6NHN0 477 aaPredicted RBP12.75□□□□□ -0.37
PABPC1-219ENST00000522387 CST8O60676 142 aa12.75□□□□□ -0.37
PABPC1-219ENST00000522387 TCP1P17987 556 aaKnown RBP12.75□□□□□ -0.37
PABPC1-219ENST00000522387 TACR2P21452 398 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms