RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 NADSYN1Q6IA69 706 aa13.47□□□□□ -0.25
CPNE3-205ENST00000522240 CES5AQ6NT32 575 aa13.47□□□□□ -0.25
CPNE3-205ENST00000522240 DRICH1Q6PGQ1 229 aaPredicted RBP13.47□□□□□ -0.25
CPNE3-205ENST00000522240 LRRC31Q6UY01 552 aa13.47□□□□□ -0.25
CPNE3-205ENST00000522240 ADAT2Q7Z6V5 191 aaKnown RBP13.47□□□□□ -0.25
CPNE3-205ENST00000522240 ZDHHC14Q8IZN3 488 aa13.47□□□□□ -0.25
CPNE3-205ENST00000522240 MMGT1Q8N4V1 131 aa13.47□□□□□ -0.25
CPNE3-205ENST00000522240 ITFG1Q8TB96 612 aa13.47□□□□□ -0.25
CPNE3-205ENST00000522240 PABPC5Q96DU9 382 aaKnown RBP13.47□□□□□ -0.25
CPNE3-205ENST00000522240 CYP2S1Q96SQ9 504 aa13.47□□□□□ -0.25
CPNE3-205ENST00000522240 AP1M1Q9BXS5 423 aa13.47□□□□□ -0.25
CPNE3-205ENST00000522240 MAGEB5Q9BZ81 275 aa13.47□□□□□ -0.25
CPNE3-205ENST00000522240 SIK2Q9H0K1 926 aa13.47□□□□□ -0.25
CPNE3-205ENST00000522240 SLITRK6Q9H5Y7 841 aa13.47□□□□□ -0.25
CPNE3-205ENST00000522240 LRRC19Q9H756 370 aa13.47□□□□□ -0.25
CPNE3-205ENST00000522240 CATSPERBQ9H7T0 1116 aa13.47□□□□□ -0.25
CPNE3-205ENST00000522240 GKN1Q9NS71 199 aa13.47□□□□□ -0.25
CPNE3-205ENST00000522240 DONSONQ9NYP3 566 aa13.47□□□□□ -0.25
CPNE3-205ENST00000522240 CLEC1BQ9P126 229 aa13.47□□□□□ -0.25
CPNE3-205ENST00000522240 STIM2Q9P246 746 aa13.47□□□□□ -0.25
CPNE3-205ENST00000522240 SH3BP1Q9Y3L3 701 aa13.47□□□□□ -0.25
CPNE3-205ENST00000522240 SNX10Q9Y5X0 201 aa13.47□□□□□ -0.25
CPNE3-205ENST00000522240 RAD54BQ9Y620 910 aa13.47□□□□□ -0.25
CPNE3-205ENST00000522240 DOCK6Q96HP0 2047 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 PRRC2BQ5JSZ5 2229 aaKnown RBP13.46□□□□□ -0.25
CPNE3-205ENST00000522240 E2F8A0AVK6 867 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 F5H5T6 163 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 LEFTY2O00292 366 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 DAPK3O43293 454 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 KLKB1P03952 638 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 RHOQP17081 205 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 ERCC2P18074 760 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 GGCXP38435 758 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 DYNLT1P63172 113 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 ZXDBP98169 803 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 OTUD4Q01804 1114 aaKnown RBP13.46□□□□□ -0.25
CPNE3-205ENST00000522240 AUHQ13825 339 aaKnown RBP13.46□□□□□ -0.25
CPNE3-205ENST00000522240 LLGL1Q15334 1064 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 ZNF77Q15935 545 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 ADGRF1Q5T601 910 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 TTC39BQ5VTQ0 682 aaPredicted RBP13.46□□□□□ -0.25
CPNE3-205ENST00000522240 RAP1GAP2Q684P5 730 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 POTEHQ6S545 545 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 TMCO3Q6UWJ1 677 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 HTR3DQ70Z44 454 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 DENND1CQ8IV53 801 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 NPAS3Q8IXF0 933 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 CPXM2Q8N436 756 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 LZTR1Q8N653 840 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 SH3RF2Q8TEC5 729 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 ING5Q8WYH8 240 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 NKD2Q969F2 451 aaPredicted RBP13.46□□□□□ -0.25
CPNE3-205ENST00000522240 MSLNLQ96KJ4 702 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 RIPOR3Q96MK2 946 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 ZYG11BQ9C0D3 744 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 S1PR5Q9H228 398 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 TDP1Q9NUW8 608 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 CLDND1Q9NY35 253 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 GDE1Q9NZC3 331 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 CFAP97Q9P2B7 532 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 AGO1Q9UL18 857 aaKnown RBP13.46□□□□□ -0.25
CPNE3-205ENST00000522240 R3HDM2Q9Y2K5 976 aaKnown RBP13.46□□□□□ -0.25
CPNE3-205ENST00000522240 NR2E1Q9Y466 385 aa13.46□□□□□ -0.25
CPNE3-205ENST00000522240 KIF26AQ9ULI4 1882 aaPredicted RBP13.46□□□□□ -0.26
CPNE3-205ENST00000522240 DOCK4Q8N1I0 1966 aa13.45□□□□□ -0.26
CPNE3-205ENST00000522240 DRGXA6NNA5 263 aa13.45□□□□□ -0.26
CPNE3-205ENST00000522240 GFRA2O00451 464 aa13.45□□□□□ -0.26
CPNE3-205ENST00000522240 MCF2LO15068 1137 aa13.45□□□□□ -0.26
CPNE3-205ENST00000522240 LIASO43766 372 aa13.45□□□□□ -0.26
CPNE3-205ENST00000522240 MFSD11O43934 449 aa13.45□□□□□ -0.26
CPNE3-205ENST00000522240 ZNF189O75820 626 aaPredicted RBP13.45□□□□□ -0.26
CPNE3-205ENST00000522240 PRAMEF12O95522 483 aa13.45□□□□□ -0.26
CPNE3-205ENST00000522240 PECAM1P16284 738 aaPredicted RBP13.45□□□□□ -0.26
CPNE3-205ENST00000522240 IGFBP4P22692 258 aa13.45□□□□□ -0.26
CPNE3-205ENST00000522240 AMPD1P23109 780 aa13.45□□□□□ -0.26
CPNE3-205ENST00000522240 MTHFRP42898 656 aa13.45□□□□□ -0.26
CPNE3-205ENST00000522240 DHX34Q14147 1143 aaKnown RBP13.45□□□□□ -0.26
CPNE3-205ENST00000522240 RABGAP1LQ5R372 815 aa13.45□□□□□ -0.26
CPNE3-205ENST00000522240 FBXL22Q6P050 247 aa13.45□□□□□ -0.26
CPNE3-205ENST00000522240 BZW1Q7L1Q6 419 aaKnown RBP13.45□□□□□ -0.26
CPNE3-205ENST00000522240 C14orf80Q86SX3 495 aa13.45□□□□□ -0.26
CPNE3-205ENST00000522240 NLRP14Q86W24 1093 aa13.45□□□□□ -0.26
CPNE3-205ENST00000522240 RTL3Q8N8U3 475 aaKnown RBP13.45□□□□□ -0.26
CPNE3-205ENST00000522240 LRRN4CLQ8ND94 238 aa13.45□□□□□ -0.26
CPNE3-205ENST00000522240 SLC35B2Q8TB61 432 aa13.45□□□□□ -0.26
CPNE3-205ENST00000522240 ACTL9Q8TC94 416 aa13.45□□□□□ -0.26
CPNE3-205ENST00000522240 P3H4Q92791 437 aa13.45□□□□□ -0.26
CPNE3-205ENST00000522240 SLCO2A1Q92959 643 aa13.45□□□□□ -0.26
CPNE3-205ENST00000522240 USP13Q92995 863 aaPredicted RBP13.45□□□□□ -0.26
CPNE3-205ENST00000522240 WBP2Q969T9 261 aa13.45□□□□□ -0.26
CPNE3-205ENST00000522240 MAGOHBQ96A72 148 aaKnown RBP13.45□□□□□ -0.26
CPNE3-205ENST00000522240 ASB2Q96Q27 587 aa13.45□□□□□ -0.26
CPNE3-205ENST00000522240 TMEM248Q9NWD8 314 aa13.45□□□□□ -0.26
CPNE3-205ENST00000522240 THEGQ9P2T0 379 aa13.45□□□□□ -0.26
CPNE3-205ENST00000522240 PCYOX1Q9UHG3 505 aa13.45□□□□□ -0.26
CPNE3-205ENST00000522240 VANGL2Q9ULK5 521 aa13.45□□□□□ -0.26
CPNE3-205ENST00000522240 SLC6A4P31645 630 aa13.44□□□□□ -0.26
CPNE3-205ENST00000522240 COILP38432 576 aaPredicted RBP13.44□□□□□ -0.26
CPNE3-205ENST00000522240 VCPP55072 806 aaKnown RBP13.44□□□□□ -0.26
CPNE3-205ENST00000522240 XRCC4Q13426 336 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms