RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-208	ENST00000520580	CAND1	Q86VP6	1230 aa	Known RBP	3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	ADGRF2	Q8IZF7	708 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	TNIP2	Q8NFZ5	429 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	OR56A1	Q8NGH5	318 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	SNX19	Q92543	992 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	CNOT9	Q92600	299 aa	Known RBP	3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	SMARCE1	Q969G3	411 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	SAT2	Q96F10	170 aa	Predicted RBP	3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	SIPA1	Q96FS4	1042 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	WDYHV1	Q96HA8	205 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	GCNA	Q96QF7	691 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	TPSD1	Q9BZJ3	242 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	EDEM3	Q9BZQ6	932 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	FAM129A	Q9BZQ8	928 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	NSUN3	Q9H649	340 aa	Known RBP	3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	NTM	Q9P121	344 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	CD207	Q9UJ71	328 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	RASAL2	Q9UJF2	1139 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	ANAPC5	Q9UJX4	755 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	TRPV2	Q9Y5S1	764 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	COPG1	Q9Y678	874 aa	Known RBP	3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	PASK	Q96RG2	1323 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	GXYLT2	A0PJZ3	443 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	FRMD3	A2A2Y4	597 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	TAF4	O00268	1085 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	RTCA	O00442	366 aa	Known RBP	3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	NKX2-8	O15522	239 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	TACC1	O75410	805 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	SEC14L2	O76054	403 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	SCG2	P13521	617 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	SAT1	P21673	171 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	MGAT1	P26572	445 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	AVPR2	P30518	371 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	THPO	P40225	353 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	GPD2	P43304	727 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	MVD	P53602	400 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	EIF3B	P55884	814 aa	Known RBP	3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	NHLH2	Q02577	135 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	DLX2	Q07687	328 aa	Predicted RBP	3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	FBXO43	Q4G163	708 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	ZNF805	Q5CZA5	627 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	RAB41	Q5JT25	222 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	PLEKHS1	Q5SXH7	462 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	CAVIN1	Q6NZI2	390 aa	Known RBP	3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	DCLRE1A	Q6PJP8	1040 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	TMPRSS9	Q7Z410	1059 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	RNF144B	Q7Z419	303 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	ZSWIM9	Q86XI8	627 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	KBTBD2	Q8IY47	623 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	ADGRG5	Q8IZF4	528 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	KLHL36	Q8N4N3	616 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	MRPS27	Q92552	414 aa	Known RBP	3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	ARHGEF2	Q92974	986 aa	Known RBP	3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	SECISBP2L	Q93073	1101 aa	Known RBP	3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	SLC22A18	Q96BI1	424 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	CCDC34	Q96HJ3	373 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	LRRC37B	Q96QE4	947 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	SRSF8	Q9BRL6	282 aa	Known RBP	3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	IL1RAPL1	Q9NZN1	696 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	MPP6	Q9NZW5	540 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	HCN3	Q9P1Z3	774 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	SUCLA2	Q9P2R7	463 aa	Predicted RBP	3.88	□□□□□ -1.79
SREK1-208	ENST00000520580	KL	Q9UEF7	1012 aa		3.88	□□□□□ -1.79
SREK1-208	ENST00000520580		A0A1B0GTW7	788 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	hCG_1809904	A0A1W2PP81	198 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580		A0A1W2PPE2	198 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580		A0A1W2PR64	198 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	NPIPB13	A6NJU9	1138 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	NPIPB5	A8MRT5	1133 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	C19orf81	C9J6K1	198 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	NPIPB4	C9JG80	1138 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	GCOM1	H8Y6P7	765 aa	Predicted RBP	3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	PSMD10	O75832	226 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	FES	P07332	822 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	CPT2	P23786	658 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	PIK3CA	P42336	1068 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	NRIP1	P48552	1158 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	HSD17B4	P51659	736 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	CLCN2	P51788	898 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	EFNA5	P52803	228 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	RAD23A	P54725	363 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	RRP1	P56182	461 aa	Known RBP	3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	RAC3	P60763	192 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	OLR1	P78380	273 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	TMF1	P82094	1093 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	OCA2	Q04671	838 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	FPGS	Q05932	587 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	DDR1	Q08345	913 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	TUBB3	Q13509	450 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	TNFAIP1	Q13829	316 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	KCNJ12	Q14500	433 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	CRYM	Q14894	314 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	PKN2	Q16513	984 aa	Known RBP	3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	KRBOX4	Q5JUW0	171 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	ERMARD	Q5T6L9	678 aa		3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	FAM102A	Q5T9C2	384 aa	Predicted RBP	3.87	□□□□□ -1.79
SREK1-208	ENST00000520580	CDC73	Q6P1J9	531 aa		3.87	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms