RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 IPO9Q96P70 1041 aaKnown RBP-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 PIGQQ9BRB3 760 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 CXorf36Q9H7Y0 433 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 TMEM160Q9NX00 188 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 TMEM181Q9P2C4 612 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 AGO1Q9UL18 857 aaKnown RBP-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 ASAP1Q9ULH1 1129 aa-0.52□□□□□ -2.49
RNU6-539P-201ENST00000516665 ZSCAN9O15535 394 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 TMPRSS11DO60235 418 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 PCDH7O60245 1069 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 PRAMEF2O60811 474 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 SERPINI2O75830 405 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 RECKO95980 971 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 CD5P06127 495 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 FAM153BP0C7A2 387 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 ENO3P13929 434 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 CREB1P16220 341 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 ITIH1P19827 911 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 KLK2P20151 261 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 HNRNPA2B1P22626 353 aaKnown RBP-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 DEUP1Q05D60 604 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 ZNF460Q14592 562 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 TERF2Q15554 542 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 UGT8Q16880 541 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 TPRNQ4KMQ1 711 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 DENND2CQ68D51 928 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 IGFL2Q6UWQ7 119 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 DSG4Q86SJ6 1040 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 NFE4Q86UQ8 179 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 DHX37Q8IY37 1157 aaKnown RBP-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 KLHL30-AS1Q8NEE0 82 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 KLHDC9Q8NEP7 349 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 SLC24A4Q8NFF2 622 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 ZNF845Q96IR2 970 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 B3GALT6Q96L58 329 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 C17orf80Q9BSJ5 609 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 SLC25A18Q9H1K4 315 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 KCNMB3Q9NPA1 279 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 USP35Q9P2H5 1018 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 THEGQ9P2T0 379 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 DKK4Q9UBT3 224 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 HESX1Q9UBX0 185 aa-0.53□□□□□ -2.49
RNU6-539P-201ENST00000516665 EPM2AB3EWF7 344 aa-0.54□□□□□ -2.5
RNU6-539P-201ENST00000516665 M0QYG6 137 aa-0.54□□□□□ -2.5
RNU6-539P-201ENST00000516665 M0R3H8 397 aa-0.54□□□□□ -2.5
RNU6-539P-201ENST00000516665 PSMD14O00487 310 aa-0.54□□□□□ -2.5
RNU6-539P-201ENST00000516665 SH2B2O14492 632 aaPredicted RBP-0.54□□□□□ -2.5
RNU6-539P-201ENST00000516665 EPHB6O15197 1021 aa-0.54□□□□□ -2.5
RNU6-539P-201ENST00000516665 LDB2O43679 373 aa-0.54□□□□□ -2.5
RNU6-539P-201ENST00000516665 PMS2P2O95744 297 aa-0.54□□□□□ -2.5
RNU6-539P-201ENST00000516665 CYP2C9P11712 490 aa-0.54□□□□□ -2.5
RNU6-539P-201ENST00000516665 CHRNB2P17787 502 aa-0.54□□□□□ -2.5
RNU6-539P-201ENST00000516665 CIITAP33076 1130 aa-0.54□□□□□ -2.5
RNU6-539P-201ENST00000516665 MCM5P33992 734 aa-0.54□□□□□ -2.5
RNU6-539P-201ENST00000516665 PHKA1P46020 1223 aa-0.54□□□□□ -2.5
RNU6-539P-201ENST00000516665 TNFAIP2Q03169 654 aa-0.54□□□□□ -2.5
RNU6-539P-201ENST00000516665 ZNF284Q2VY69 593 aa-0.54□□□□□ -2.5
RNU6-539P-201ENST00000516665 HERC4Q5GLZ8 1057 aaPredicted RBP-0.54□□□□□ -2.5
RNU6-539P-201ENST00000516665 SLC35E4Q6ICL7 350 aa-0.54□□□□□ -2.5
RNU6-539P-201ENST00000516665 LAYNQ6UX15 382 aa-0.54□□□□□ -2.5
RNU6-539P-201ENST00000516665 USP37Q86T82 979 aa-0.54□□□□□ -2.5
RNU6-539P-201ENST00000516665 FAM46DQ8NEK8 389 aa-0.54□□□□□ -2.5
RNU6-539P-201ENST00000516665 SOSTQ9BQB4 213 aa-0.54□□□□□ -2.5
RNU6-539P-201ENST00000516665 ADI1Q9BV57 179 aa-0.54□□□□□ -2.5
RNU6-539P-201ENST00000516665 BRD9Q9H8M2 597 aa-0.54□□□□□ -2.5
RNU6-539P-201ENST00000516665 MRPS28Q9Y2Q9 187 aaKnown RBP-0.54□□□□□ -2.5
RNU6-539P-201ENST00000516665 HCFC1P51610 2035 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 SPATA31A1Q5TZJ5 1347 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 LRCOL1A6NCL2 159 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 A6NNZ2 444 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 PSMD9O00233 223 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 CCNT1O60563 726 aaKnown RBP-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 MOCS3O95396 460 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 MBPP02686 304 aaPredicted RBP-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 INHBAP08476 426 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 ATXN1LP0C7T5 689 aaKnown RBP-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 PRSS56P0CW18 603 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 SLC5A1P13866 664 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 ZNF17P17021 662 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 FLT3P36888 993 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 THPOP40225 353 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 HUNKP57058 714 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 MYO1EQ12965 1108 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 MALLQ13021 153 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 ITGA9Q13797 1035 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 MUM1Q2TAK8 710 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 LONRF3Q496Y0 759 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 PRR30Q53SZ7 412 aaPredicted RBP-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 XKR9Q5GH70 373 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 ZNF530Q6P9A1 599 aaPredicted RBP-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 Q6ZS52 159 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 KDELC2Q7Z4H8 507 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 UEVLDQ8IX04 471 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 RHOT1Q8IXI2 618 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 HNRNPLLQ8WVV9 542 aaKnown RBP-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 DPF2Q92785 391 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 ZNF669Q96BR6 464 aaPredicted RBP-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 AGAP3Q96P47 875 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 ZNF385AQ96PM9 386 aaKnown RBP-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 ACE2Q9BYF1 805 aaPredicted RBP-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms