RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 NFATC1O95644 943 aa20.88■□□□□ 0.93
USP53-208ENST00000514305 EGFP01133 1207 aa20.88■□□□□ 0.93
USP53-208ENST00000514305 IGLV3-25P01717 112 aa20.88■□□□□ 0.93
USP53-208ENST00000514305 HMBSP08397 361 aa20.88■□□□□ 0.93
USP53-208ENST00000514305 TGM1P22735 817 aa20.88■□□□□ 0.93
USP53-208ENST00000514305 GALK1P51570 392 aa20.88■□□□□ 0.93
USP53-208ENST00000514305 AIF1P55008 147 aa20.88■□□□□ 0.93
USP53-208ENST00000514305 NAP1L1P55209 391 aaKnown RBP20.88■□□□□ 0.93
USP53-208ENST00000514305 CCZ1BP86790 482 aa20.88■□□□□ 0.93
USP53-208ENST00000514305 CCZ1P86791 482 aaPredicted RBP20.88■□□□□ 0.93
USP53-208ENST00000514305 ATP11AP98196 1134 aa20.88■□□□□ 0.93
USP53-208ENST00000514305 CCDC14Q49A88 953 aa20.88■□□□□ 0.93
USP53-208ENST00000514305 PKN3Q6P5Z2 889 aa20.88■□□□□ 0.93
USP53-208ENST00000514305 SLC35G2Q8TBE7 412 aa20.88■□□□□ 0.93
USP53-208ENST00000514305 CD101Q93033 1021 aa20.88■□□□□ 0.93
USP53-208ENST00000514305 CHFRQ96EP1 664 aa20.88■□□□□ 0.93
USP53-208ENST00000514305 BTN2A3PQ96KV6 586 aa20.88■□□□□ 0.93
USP53-208ENST00000514305 TBCBQ99426 244 aa20.88■□□□□ 0.93
USP53-208ENST00000514305 IRX2Q9BZI1 471 aaPredicted RBP20.88■□□□□ 0.93
USP53-208ENST00000514305 COX16Q9P0S2 106 aa20.88■□□□□ 0.93
USP53-208ENST00000514305 SPAG17Q6Q759 2223 aa20.88■□□□□ 0.93
USP53-208ENST00000514305 KIAA1549LQ6ZVL6 1849 aa20.88■□□□□ 0.93
USP53-208ENST00000514305 CCDC163A0A0D9SF12 145 aa20.87■□□□□ 0.93
USP53-208ENST00000514305 MED19A0JLT2 244 aaPredicted RBP20.87■□□□□ 0.93
USP53-208ENST00000514305 CORO1AP31146 461 aaKnown RBP20.87■□□□□ 0.93
USP53-208ENST00000514305 CDO1Q16878 200 aa20.87■□□□□ 0.93
USP53-208ENST00000514305 EML3Q32P44 896 aa20.87■□□□□ 0.93
USP53-208ENST00000514305 ACRBPQ8NEB7 543 aa20.87■□□□□ 0.93
USP53-208ENST00000514305 ADAM32Q8TC27 787 aa20.87■□□□□ 0.93
USP53-208ENST00000514305 FAM172AQ8WUF8 416 aa20.87■□□□□ 0.93
USP53-208ENST00000514305 CENPIQ92674 756 aaPredicted RBP20.87■□□□□ 0.93
USP53-208ENST00000514305 ARHGEF26Q96DR7 871 aa20.87■□□□□ 0.93
USP53-208ENST00000514305 SLC39A13Q96H72 371 aa20.87■□□□□ 0.93
USP53-208ENST00000514305 ZFRQ96KR1 1074 aaKnown RBP20.87■□□□□ 0.93
USP53-208ENST00000514305 ADGRG1Q9Y653 693 aa20.87■□□□□ 0.93
USP53-208ENST00000514305 TYW5A2RUC4 315 aaKnown RBP20.86■□□□□ 0.93
USP53-208ENST00000514305 PJA2O43164 708 aa20.86■□□□□ 0.93
USP53-208ENST00000514305 MSI1O43347 362 aaKnown RBP20.86■□□□□ 0.93
USP53-208ENST00000514305 MTA2O94776 668 aa20.86■□□□□ 0.93
USP53-208ENST00000514305 GJB6O95452 261 aa20.86■□□□□ 0.93
USP53-208ENST00000514305 IGLV3-27P01718 113 aa20.86■□□□□ 0.93
USP53-208ENST00000514305 CXCR3P49682 368 aa20.86■□□□□ 0.93
USP53-208ENST00000514305 HADHQ16836 314 aaKnown RBP20.86■□□□□ 0.93
USP53-208ENST00000514305 CAMKK1Q8N5S9 505 aa20.86■□□□□ 0.93
USP53-208ENST00000514305 FAM160A2Q8N612 972 aaPredicted RBP20.86■□□□□ 0.93
USP53-208ENST00000514305 NIPA2Q8N8Q9 360 aa20.86■□□□□ 0.93
USP53-208ENST00000514305 CCDC26Q8TAB7 109 aa20.86■□□□□ 0.93
USP53-208ENST00000514305 RTKNQ9BST9 563 aa20.86■□□□□ 0.93
USP53-208ENST00000514305 FBRSL1Q9HCM7 1045 aaKnown RBP20.86■□□□□ 0.93
USP53-208ENST00000514305 SEMA4GQ9NTN9 838 aa20.86■□□□□ 0.93
USP53-208ENST00000514305 EML5Q05BV3 1969 aa20.86■□□□□ 0.93
USP53-208ENST00000514305 CCP110O43303 1012 aa20.85■□□□□ 0.93
USP53-208ENST00000514305 ZSCAN12O43309 604 aa20.85■□□□□ 0.93
USP53-208ENST00000514305 FOXD2O60548 495 aaPredicted RBP20.85■□□□□ 0.93
USP53-208ENST00000514305 RPP40O75818 363 aaKnown RBP20.85■□□□□ 0.93
USP53-208ENST00000514305 CYBBP04839 570 aa20.85■□□□□ 0.93
USP53-208ENST00000514305 PCK1P35558 622 aa20.85■□□□□ 0.93
USP53-208ENST00000514305 SLC1A1P43005 524 aa20.85■□□□□ 0.93
USP53-208ENST00000514305 PXNP49023 591 aaPredicted RBP20.85■□□□□ 0.93
USP53-208ENST00000514305 ATXN1P54253 815 aaKnown RBP20.85■□□□□ 0.93
USP53-208ENST00000514305 HADHBP55084 474 aaKnown RBP20.85■□□□□ 0.93
USP53-208ENST00000514305 EIF4EBP2Q13542 120 aaPredicted RBP20.85■□□□□ 0.93
USP53-208ENST00000514305 ZC3H12AQ5D1E8 599 aaKnown RBP20.85■□□□□ 0.93
USP53-208ENST00000514305 SCYL2Q6P3W7 929 aa20.85■□□□□ 0.93
USP53-208ENST00000514305 RPLP0P6Q8NHW5 317 aa20.85■□□□□ 0.93
USP53-208ENST00000514305 UBE2Q2Q8WVN8 375 aa20.85■□□□□ 0.93
USP53-208ENST00000514305 GAB3Q8WWW8 586 aa20.85■□□□□ 0.93
USP53-208ENST00000514305 ACDQ96AP0 544 aa20.85■□□□□ 0.93
USP53-208ENST00000514305 KRTAP3-3Q9BYR6 98 aa20.85■□□□□ 0.93
USP53-208ENST00000514305 KRTAP3-2Q9BYR7 98 aa20.85■□□□□ 0.93
USP53-208ENST00000514305 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.85■□□□□ 0.93
USP53-208ENST00000514305 KCNU1A8MYU2 1149 aa20.84■□□□□ 0.93
USP53-208ENST00000514305 PRPSAP2O60256 369 aa20.84■□□□□ 0.93
USP53-208ENST00000514305 ACSL4O60488 711 aa20.84■□□□□ 0.93
USP53-208ENST00000514305 MAN1A1P33908 653 aa20.84■□□□□ 0.93
USP53-208ENST00000514305 CSRP2Q16527 193 aa20.84■□□□□ 0.93
USP53-208ENST00000514305 C15orf59Q2T9L4 293 aaPredicted RBP20.84■□□□□ 0.93
USP53-208ENST00000514305 NAIF1Q69YI7 327 aaPredicted RBP20.84■□□□□ 0.93
USP53-208ENST00000514305 PRR23CQ6ZRP0 262 aa20.84■□□□□ 0.93
USP53-208ENST00000514305 BNIPLQ7Z465 357 aa20.84■□□□□ 0.93
USP53-208ENST00000514305 DENND1CQ8IV53 801 aa20.84■□□□□ 0.93
USP53-208ENST00000514305 RNF10Q8N5U6 811 aaKnown RBP20.84■□□□□ 0.93
USP53-208ENST00000514305 NETO1Q8TDF5 533 aa20.84■□□□□ 0.93
USP53-208ENST00000514305 FCRL2Q96LA5 508 aaPredicted RBP20.84■□□□□ 0.93
USP53-208ENST00000514305 HAPLN3Q96S86 360 aa20.84■□□□□ 0.93
USP53-208ENST00000514305 DESI2Q9BSY9 194 aa20.84■□□□□ 0.93
USP53-208ENST00000514305 TKTL2Q9H0I9 626 aa20.84■□□□□ 0.93
USP53-208ENST00000514305 LINC00597Q9H2U6 94 aa20.84■□□□□ 0.93
USP53-208ENST00000514305 PIGVQ9NUD9 493 aa20.84■□□□□ 0.93
USP53-208ENST00000514305 AGO1Q9UL18 857 aaKnown RBP20.84■□□□□ 0.93
USP53-208ENST00000514305 MOCS2O96007 188 aaPredicted RBP20.83■□□□□ 0.93
USP53-208ENST00000514305 HOXC13P31276 330 aa20.83■□□□□ 0.93
USP53-208ENST00000514305 ZXDBP98169 803 aa20.83■□□□□ 0.93
USP53-208ENST00000514305 MESDQ14696 234 aa20.83■□□□□ 0.93
USP53-208ENST00000514305 BOLA3Q53S33 107 aa20.83■□□□□ 0.93
USP53-208ENST00000514305 ARSIQ5FYB1 569 aa20.83■□□□□ 0.93
USP53-208ENST00000514305 ADGRF1Q5T601 910 aa20.83■□□□□ 0.93
USP53-208ENST00000514305 TRNP1Q6NT89 227 aa20.83■□□□□ 0.93
USP53-208ENST00000514305 LRRC31Q6UY01 552 aa20.83■□□□□ 0.93
USP53-208ENST00000514305 Q6ZNB5 142 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms