RNA–Protein interactions for RNA: ENST00000513636.1

ATP2C1-220, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-220ENST00000513636 COL15A1P39059 1388 aa4.12□□□□□ -1.75
ATP2C1-220ENST00000513636 NRXN2Q9P2S2 1712 aa4.12□□□□□ -1.75
ATP2C1-220ENST00000513636 DLEC1Q9Y238 1755 aa4.12□□□□□ -1.75
ATP2C1-220ENST00000513636 KIF13BQ9NQT8 1826 aa4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 AK9Q5TCS8 1911 aa4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 TNRC6CQ9HCJ0 1690 aaKnown RBP4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 A0A087WWL8 130 aa4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 PRSS47A8MTI9 375 aa4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 ALG1L2C9J202 215 aa4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 BTN3A1O00481 513 aa4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 TCERG1O14776 1098 aaKnown RBP4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 SPRY2O43597 315 aa4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 AP1G1O43747 822 aa4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 STARD3NLO95772 234 aa4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 FGF3P11487 239 aaPredicted RBP4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 ATF7P17544 494 aaPredicted RBP4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 EIF2S2P20042 333 aaKnown RBP4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 TNFRSF8P28908 595 aa4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 UQCRC1P31930 480 aa4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 RARSP54136 660 aaKnown RBP4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 SLC12A2P55011 1212 aa4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 RRP1P56182 461 aaKnown RBP4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 TIRAPP58753 221 aa4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 CTBP1Q13363 440 aa4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 ITPK1Q13572 414 aa4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 KPNB1Q14974 876 aaKnown RBP4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 TRAPPC11Q7Z392 1133 aa4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 SKAP1Q86WV1 359 aa4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 IQCF1Q8N6M8 205 aa4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 CTHRC1Q96CG8 243 aa4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 HSPBAP1Q96EW2 488 aa4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 TRMT61AQ96FX7 289 aaKnown RBP4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 MED30Q96HR3 178 aa4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 SF3B5Q9BWJ5 86 aaKnown RBP4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 TEX13AQ9BXU3 409 aaPredicted RBP4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 CHMP4AQ9BY43 222 aa4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 GTPBP4Q9BZE4 634 aaKnown RBP4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 ARHGAP39Q9C0H5 1083 aa4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 TRIM36Q9NQ86 728 aa4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 STAP2Q9UGK3 403 aa4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 ZBTB1Q9Y2K1 713 aa4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 TAF1P21675 1872 aa4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 BRCA1P38398 1863 aaKnown RBP4.11□□□□□ -1.75
ATP2C1-220ENST00000513636 TMEM272A0A1B0GTI8 110 aa4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 A0A1W2PPL8 197 aa4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 F8W810 466 aa4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 PHGDHO43175 533 aaKnown RBP4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 MARCH6O60337 910 aa4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 CAMTA2O94983 1202 aa4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 PLAUP00749 431 aa4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 VCAM1P19320 739 aa4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 TNFRSF1BP20333 461 aa4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 AKAP5P24588 427 aa4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 CRKLP46109 303 aaKnown RBP4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 PIP4K2AP48426 406 aaPredicted RBP4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 ENTPD1P49961 510 aa4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 TXNL4AP83876 142 aaKnown RBP4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 PTGR1Q14914 329 aa4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 GRAMD1CQ8IYS0 662 aa4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 SLC44A5Q8NCS7 719 aa4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 BCAS4Q8TDM0 211 aa4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 PIGKQ92643 395 aa4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 WBP1Q96G27 269 aa4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 ZBTB45Q96K62 511 aaPredicted RBP4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 PPP1R9BQ96SB3 815 aa4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 CGRRF1Q99675 332 aa4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 RBM38Q9H0Z9 239 aaKnown RBP4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 MYLK2Q9H1R3 596 aa4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 DDX21Q9NR30 783 aaKnown RBP eCLIP4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 DBF4Q9UBU7 674 aaPredicted RBP4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 USP16Q9Y5T5 823 aa4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 ABCC4O15439 1325 aa4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 PTPRCP08575 1304 aa4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 ADCY9O60503 1353 aa4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 ATP10DQ9P241 1426 aa4.1□□□□□ -1.75
ATP2C1-220ENST00000513636 C2CD4BA6NLJ0 364 aa4.09□□□□□ -1.75
ATP2C1-220ENST00000513636 TRIM27P14373 513 aa4.09□□□□□ -1.75
ATP2C1-220ENST00000513636 MYL6BP14649 208 aa4.09□□□□□ -1.75
ATP2C1-220ENST00000513636 MLH1P40692 756 aa4.09□□□□□ -1.75
ATP2C1-220ENST00000513636 GATMP50440 423 aa4.09□□□□□ -1.75
ATP2C1-220ENST00000513636 SLC13A2Q13183 592 aa4.09□□□□□ -1.75
ATP2C1-220ENST00000513636 INPP5JQ15735 1006 aaPredicted RBP4.09□□□□□ -1.75
ATP2C1-220ENST00000513636 G2E3Q7L622 706 aa4.09□□□□□ -1.75
ATP2C1-220ENST00000513636 DEFB132Q7Z7B7 95 aa4.09□□□□□ -1.75
ATP2C1-220ENST00000513636 FTSJ3Q8IY81 847 aaKnown RBP4.09□□□□□ -1.75
ATP2C1-220ENST00000513636 ADGRF4Q8IZF3 695 aa4.09□□□□□ -1.75
ATP2C1-220ENST00000513636 KBTBD7Q8WVZ9 684 aa4.09□□□□□ -1.75
ATP2C1-220ENST00000513636 FRAT1Q92837 279 aaPredicted RBP4.09□□□□□ -1.75
ATP2C1-220ENST00000513636 TRIM5Q9C035 493 aa4.09□□□□□ -1.75
ATP2C1-220ENST00000513636 HYPKQ9NX55 129 aa4.09□□□□□ -1.75
ATP2C1-220ENST00000513636 CDY1Q9Y6F8 540 aa4.09□□□□□ -1.75
ATP2C1-220ENST00000513636 RNF123Q5XPI4 1314 aa4.09□□□□□ -1.75
ATP2C1-220ENST00000513636 LRP5O75197 1615 aa4.09□□□□□ -1.76
ATP2C1-220ENST00000513636 LRRC37AA6NMS7 1700 aa4.09□□□□□ -1.76
ATP2C1-220ENST00000513636 KIAA1551Q9HCM1 1747 aa4.09□□□□□ -1.76
ATP2C1-220ENST00000513636 IPO8O15397 1037 aaKnown RBP4.08□□□□□ -1.76
ATP2C1-220ENST00000513636 AKAP10O43572 662 aa4.08□□□□□ -1.76
ATP2C1-220ENST00000513636 PLIN1O60240 522 aa4.08□□□□□ -1.76
ATP2C1-220ENST00000513636 DDX58O95786 925 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms