RNA–Protein interactions for RNA: ENST00000512242.5

COPB2-209, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 5

Gene COPB2, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-209ENST00000512242 DCAF12L1Q5VU92 463 aa11.33□□□□□ -0.6
COPB2-209ENST00000512242 PEAR1Q5VY43 1037 aaPredicted RBP11.33□□□□□ -0.6
COPB2-209ENST00000512242 OR6B2Q6IFH4 312 aa11.33□□□□□ -0.6
COPB2-209ENST00000512242 RABEPKQ7Z6M1 372 aa11.33□□□□□ -0.6
COPB2-209ENST00000512242 CHSY1Q86X52 802 aa11.33□□□□□ -0.6
COPB2-209ENST00000512242 FAM114A1Q8IWE2 563 aa11.33□□□□□ -0.6
COPB2-209ENST00000512242 DEFB106AQ8N104 65 aa11.33□□□□□ -0.6
COPB2-209ENST00000512242 ZCCHC9Q8N567 271 aaKnown RBP11.33□□□□□ -0.6
COPB2-209ENST00000512242 C1orf131Q8NDD1 294 aaKnown RBP11.33□□□□□ -0.6
COPB2-209ENST00000512242 FIBINQ8TAL6 211 aa11.33□□□□□ -0.6
COPB2-209ENST00000512242 GANCQ8TET4 914 aa11.33□□□□□ -0.6
COPB2-209ENST00000512242 SHC3Q92529 594 aa11.33□□□□□ -0.6
COPB2-209ENST00000512242 SLC39A13Q96H72 371 aa11.33□□□□□ -0.6
COPB2-209ENST00000512242 PPP1R13BQ96KQ4 1090 aa11.33□□□□□ -0.6
COPB2-209ENST00000512242 CPXM1Q96SM3 734 aa11.33□□□□□ -0.6
COPB2-209ENST00000512242 TUBGCP2Q9BSJ2 902 aa11.33□□□□□ -0.6
COPB2-209ENST00000512242 TRIM62Q9BVG3 475 aa11.33□□□□□ -0.6
COPB2-209ENST00000512242 NUP62CLQ9H1M0 184 aa11.33□□□□□ -0.6
COPB2-209ENST00000512242 LHX5Q9H2C1 402 aa11.33□□□□□ -0.6
COPB2-209ENST00000512242 PDCL3Q9H2J4 239 aa11.33□□□□□ -0.6
COPB2-209ENST00000512242 TMEM245Q9H330 911 aa11.33□□□□□ -0.6
COPB2-209ENST00000512242 NDST4Q9H3R1 872 aa11.33□□□□□ -0.6
COPB2-209ENST00000512242 SLC32A1Q9H598 525 aa11.33□□□□□ -0.6
COPB2-209ENST00000512242 SYNCQ9H7C4 482 aa11.33□□□□□ -0.6
COPB2-209ENST00000512242 FAM204AQ9H8W3 233 aa11.33□□□□□ -0.6
COPB2-209ENST00000512242 PRSS16Q9NQE7 514 aa11.33□□□□□ -0.6
COPB2-209ENST00000512242 SUSD2Q9UGT4 822 aa11.33□□□□□ -0.6
COPB2-209ENST00000512242 SUN2Q9UH99 717 aa11.33□□□□□ -0.6
COPB2-209ENST00000512242 SLC12A6Q9UHW9 1150 aa11.33□□□□□ -0.6
COPB2-209ENST00000512242 EIF2B4Q9UI10 523 aaKnown RBP11.33□□□□□ -0.6
COPB2-209ENST00000512242 SPAARA0A1B0GVQ0 90 aa11.32□□□□□ -0.6
COPB2-209ENST00000512242 GTPBP10A4D1E9 387 aaKnown RBP11.32□□□□□ -0.6
COPB2-209ENST00000512242 METTL12A8MUP2 240 aa11.32□□□□□ -0.6
COPB2-209ENST00000512242 TOP3BO95985 862 aaKnown RBP11.32□□□□□ -0.6
COPB2-209ENST00000512242 DNTTP04053 509 aa11.32□□□□□ -0.6
COPB2-209ENST00000512242 CSRP1P21291 193 aaKnown RBP11.32□□□□□ -0.6
COPB2-209ENST00000512242 ABCB4P21439 1286 aa11.32□□□□□ -0.6
COPB2-209ENST00000512242 TACR2P21452 398 aa11.32□□□□□ -0.6
COPB2-209ENST00000512242 ACSL1P33121 698 aa11.32□□□□□ -0.6
COPB2-209ENST00000512242 CSKP41240 450 aa11.32□□□□□ -0.6
COPB2-209ENST00000512242 CTSOP43234 321 aaPredicted RBP11.32□□□□□ -0.6
COPB2-209ENST00000512242 RNASE9P60153 205 aaKnown RBP11.32□□□□□ -0.6
COPB2-209ENST00000512242 CDK17Q00537 523 aa11.32□□□□□ -0.6
COPB2-209ENST00000512242 NME3Q13232 169 aa11.32□□□□□ -0.6
COPB2-209ENST00000512242 RAPGEF1Q13905 1077 aa11.32□□□□□ -0.6
COPB2-209ENST00000512242 VWA3BQ502W6 1294 aa11.32□□□□□ -0.6
COPB2-209ENST00000512242 EFHC1Q5JVL4 640 aa11.32□□□□□ -0.6
COPB2-209ENST00000512242 KIAA0907Q7Z7F0 614 aaPredicted RBP11.32□□□□□ -0.6
COPB2-209ENST00000512242 SLC47A2Q86VL8 602 aa11.32□□□□□ -0.6
COPB2-209ENST00000512242 DHX40Q8IX18 779 aaKnown RBP11.32□□□□□ -0.6
COPB2-209ENST00000512242 APCDD1Q8J025 514 aa11.32□□□□□ -0.6
COPB2-209ENST00000512242 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.32□□□□□ -0.62e-6■□□□□ 10.6
COPB2-209ENST00000512242 ATP6V0D2Q8N8Y2 350 aa11.32□□□□□ -0.6
COPB2-209ENST00000512242 BTN2A3PQ96KV6 586 aa11.32□□□□□ -0.6
COPB2-209ENST00000512242 SIX2Q9NPC8 291 aa11.32□□□□□ -0.6
COPB2-209ENST00000512242 SAMSN1Q9NSI8 373 aaKnown RBP11.32□□□□□ -0.6
COPB2-209ENST00000512242 DDIT4Q9NX09 232 aa11.32□□□□□ -0.6
COPB2-209ENST00000512242 INTS6Q9UL03 887 aaKnown RBP11.32□□□□□ -0.6
COPB2-209ENST00000512242 GOLGA4Q13439 2230 aaKnown RBP11.32□□□□□ -0.6
COPB2-209ENST00000512242 CEP295Q9C0D2 2601 aa11.32□□□□□ -0.6
COPB2-209ENST00000512242 A0A1B0GTW7 788 aa11.31□□□□□ -0.6
COPB2-209ENST00000512242 FAM47DPA6NHR8 397 aa11.31□□□□□ -0.6
COPB2-209ENST00000512242 TTC34A8MYJ7 566 aa11.31□□□□□ -0.6
COPB2-209ENST00000512242 F5H5T6 163 aa11.31□□□□□ -0.6
COPB2-209ENST00000512242 LUC7L3O95232 432 aaKnown RBP11.31□□□□□ -0.6
COPB2-209ENST00000512242 MOCS3O95396 460 aa11.31□□□□□ -0.6
COPB2-209ENST00000512242 ERBB2P04626 1255 aa11.31□□□□□ -0.6
COPB2-209ENST00000512242 ERCC5P28715 1186 aaPredicted RBP11.31□□□□□ -0.6
COPB2-209ENST00000512242 CLCN1P35523 988 aa11.31□□□□□ -0.6
COPB2-209ENST00000512242 RPS14P62263 151 aaKnown RBP11.31□□□□□ -0.6
COPB2-209ENST00000512242 SIM1P81133 766 aaPredicted RBP11.31□□□□□ -0.6
COPB2-209ENST00000512242 NNTQ13423 1086 aa11.31□□□□□ -0.6
COPB2-209ENST00000512242 KCNJ12Q14500 433 aa11.31□□□□□ -0.6
COPB2-209ENST00000512242 DRAP1Q14919 205 aaPredicted RBP11.31□□□□□ -0.6
COPB2-209ENST00000512242 MEA1Q16626 185 aa11.31□□□□□ -0.6
COPB2-209ENST00000512242 PITRM1Q5JRX3 1037 aa11.31□□□□□ -0.6
COPB2-209ENST00000512242 C11orf57Q6ZUT1 292 aaPredicted RBP11.31□□□□□ -0.6
COPB2-209ENST00000512242 FAM183BPQ6ZVS7 135 aa11.31□□□□□ -0.6
COPB2-209ENST00000512242 BEND5Q7L4P6 421 aa11.31□□□□□ -0.6
COPB2-209ENST00000512242 CIR1Q86X95 450 aaPredicted RBP11.31□□□□□ -0.6
COPB2-209ENST00000512242 ZNF557Q8N988 423 aaPredicted RBP11.31□□□□□ -0.6
COPB2-209ENST00000512242 CADM4Q8NFZ8 388 aa11.31□□□□□ -0.6
COPB2-209ENST00000512242 TTC17Q96AE7 1141 aa11.31□□□□□ -0.6
COPB2-209ENST00000512242 LMLNQ96KR4 655 aa11.31□□□□□ -0.6
COPB2-209ENST00000512242 RPL10LQ96L21 214 aaKnown RBP11.31□□□□□ -0.6
COPB2-209ENST00000512242 NOX5Q96PH1 765 aa11.31□□□□□ -0.6
COPB2-209ENST00000512242 IRX2Q9BZI1 471 aaPredicted RBP11.31□□□□□ -0.6
COPB2-209ENST00000512242 C6orf106Q9H6K1 298 aaPredicted RBP11.31□□□□□ -0.6
COPB2-209ENST00000512242 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.31□□□□□ -0.6
COPB2-209ENST00000512242 KIAA1522Q9P206 1035 aaPredicted RBP11.31□□□□□ -0.6
COPB2-209ENST00000512242 DACH1Q9UI36 760 aa11.31□□□□□ -0.6
COPB2-209ENST00000512242 SLCO3A1Q9UIG8 710 aa11.31□□□□□ -0.6
COPB2-209ENST00000512242 ERVW-1Q9UQF0 538 aa11.31□□□□□ -0.6
COPB2-209ENST00000512242 KCNU1A8MYU2 1149 aa11.3□□□□□ -0.6
COPB2-209ENST00000512242 BCAT2O15382 392 aaPredicted RBP11.3□□□□□ -0.6
COPB2-209ENST00000512242 RNASEH1O60930 286 aaKnown RBP11.3□□□□□ -0.6
COPB2-209ENST00000512242 HSF2BPO75031 334 aa11.3□□□□□ -0.6
COPB2-209ENST00000512242 SIN3BO75182 1162 aa11.3□□□□□ -0.6
COPB2-209ENST00000512242 FSBPO95073 299 aa11.3□□□□□ -0.6
COPB2-209ENST00000512242 GGCXP38435 758 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms