RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 FATE1Q969F0 183 aa15.65■□□□□ 0.1
SCLT1-209ENST00000511426 EXOC4Q96A65 974 aa15.65■□□□□ 0.1
SCLT1-209ENST00000511426 TTC25Q96NG3 672 aa15.65■□□□□ 0.1
SCLT1-209ENST00000511426 PPP1R2P1Q96PQ5 205 aa15.65■□□□□ 0.1
SCLT1-209ENST00000511426 DDX50Q9BQ39 737 aaKnown RBP15.65■□□□□ 0.1
SCLT1-209ENST00000511426 ZYG11BQ9C0D3 744 aa15.65■□□□□ 0.1
SCLT1-209ENST00000511426 SIK2Q9H0K1 926 aa15.65■□□□□ 0.1
SCLT1-209ENST00000511426 PRDM12Q9H4Q4 367 aa15.65■□□□□ 0.1
SCLT1-209ENST00000511426 CCSER2Q9H7U1 834 aa15.65■□□□□ 0.1
SCLT1-209ENST00000511426 NUDT5Q9UKK9 219 aa15.65■□□□□ 0.1
SCLT1-209ENST00000511426 LCHNA4D1U4 455 aa15.64■□□□□ 0.09
SCLT1-209ENST00000511426 C2orf71A6NGG8 1288 aa15.64■□□□□ 0.09
SCLT1-209ENST00000511426 DRGXA6NNA5 263 aa15.64■□□□□ 0.09
SCLT1-209ENST00000511426 OLFM2O95897 454 aa15.64■□□□□ 0.09
SCLT1-209ENST00000511426 POU2F2P09086 479 aa15.64■□□□□ 0.09
SCLT1-209ENST00000511426 CDC25CP30307 473 aa15.64■□□□□ 0.09
SCLT1-209ENST00000511426 GARSP41250 739 aaKnown RBP15.64■□□□□ 0.09
SCLT1-209ENST00000511426 NDST2P52849 883 aa15.64■□□□□ 0.09
SCLT1-209ENST00000511426 C5orf22Q49AR2 442 aa15.64■□□□□ 0.09
SCLT1-209ENST00000511426 PIK3R6Q5UE93 754 aa15.64■□□□□ 0.09
SCLT1-209ENST00000511426 DENND2CQ68D51 928 aa15.64■□□□□ 0.09
SCLT1-209ENST00000511426 TIGD7Q6NT04 549 aaPredicted RBP15.64■□□□□ 0.09
SCLT1-209ENST00000511426 RWDD4Q6NW29 188 aaKnown RBP15.64■□□□□ 0.09
SCLT1-209ENST00000511426 CENPUQ71F23 418 aa15.64■□□□□ 0.09
SCLT1-209ENST00000511426 ZNF683Q8IZ20 524 aa15.64■□□□□ 0.09
SCLT1-209ENST00000511426 LEMD2Q8NC56 503 aa15.64■□□□□ 0.09
SCLT1-209ENST00000511426 KREMEN2Q8NCW0 462 aa15.64■□□□□ 0.09
SCLT1-209ENST00000511426 UBLCP1Q8WVY7 318 aaPredicted RBP15.64■□□□□ 0.09
SCLT1-209ENST00000511426 CPT1BQ92523 772 aa15.64■□□□□ 0.09
SCLT1-209ENST00000511426 SH3GL2Q99962 352 aa15.64■□□□□ 0.09
SCLT1-209ENST00000511426 EIF2B3Q9NR50 452 aaKnown RBP15.64■□□□□ 0.09
SCLT1-209ENST00000511426 TMEM248Q9NWD8 314 aa15.64■□□□□ 0.09
SCLT1-209ENST00000511426 TRHDEQ9UKU6 1024 aa15.64■□□□□ 0.09
SCLT1-209ENST00000511426 PCDHA11Q9Y5I1 949 aa15.64■□□□□ 0.09
SCLT1-209ENST00000511426 COCHO43405 550 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 TBX18O95935 607 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 MOCS2O96007 188 aaPredicted RBP15.63■□□□□ 0.09
SCLT1-209ENST00000511426 F11P03951 625 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 C8AP07357 584 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 SRGAP2BP0DMP2 458 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 ETS1P14921 441 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 CA8P35219 290 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 ARL4CP56559 192 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 AUHQ13825 339 aaKnown RBP15.63■□□□□ 0.09
SCLT1-209ENST00000511426 ARHGEF18Q6ZSZ5 1173 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 UMODL1-AS1Q8N2C9 162 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 MCUQ8NE86 351 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 P2RY11Q96G91 374 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 GCNAQ96QF7 691 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 TGS1Q96RS0 853 aaKnown RBP15.63■□□□□ 0.09
SCLT1-209ENST00000511426 PRMT1Q99873 361 aaKnown RBP15.63■□□□□ 0.09
SCLT1-209ENST00000511426 ZMYM5Q9UJ78 669 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 GOLGA6L10A6NI86 522 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 E7ESA3 106 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 ABHD2P08910 425 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 TSHRP16473 764 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 TPSB2P20231 275 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 CCNCP24863 283 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 MAPKAPK2P49137 400 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 ERVFC1P60507 584 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 BASP1P80723 227 aaKnown RBP15.63■□□□□ 0.09
SCLT1-209ENST00000511426 SARNPP82979 210 aaKnown RBP15.63■□□□□ 0.09
SCLT1-209ENST00000511426 AP1B1Q10567 949 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 SEMA5AQ13591 1074 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 KCNJ11Q14654 390 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 TPSAB1Q15661 275 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 UAP1Q16222 522 aaPredicted RBP15.63■□□□□ 0.09
SCLT1-209ENST00000511426 HIF1AQ16665 826 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 ARTNQ5T4W7 220 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 AFMIDQ63HM1 303 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 NLRP14Q86W24 1093 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 PDIK1LQ8N165 341 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 NPWQ8N729 165 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 CCNYQ8ND76 341 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 MRPS31Q92665 395 aaKnown RBP15.63■□□□□ 0.09
SCLT1-209ENST00000511426 ZIM3Q96PE6 472 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 RBM15Q96T37 977 aaKnown RBP eCLIP15.63■□□□□ 0.097e-8■■■■□ 26.4
SCLT1-209ENST00000511426 IL21Q9HBE4 155 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 RAB6BQ9NRW1 208 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 IGSF9Q9P2J2 1179 aa15.63■□□□□ 0.09
SCLT1-209ENST00000511426 PLXNA4Q9HCM2 1894 aa15.62■□□□□ 0.09
SCLT1-209ENST00000511426 ERI2A8K979 691 aaKnown RBP15.62■□□□□ 0.09
SCLT1-209ENST00000511426 GOLGA8KD6RF30 607 aa15.62■□□□□ 0.09
SCLT1-209ENST00000511426 F5H5T6 163 aa15.62■□□□□ 0.09
SCLT1-209ENST00000511426 RIPK2O43353 540 aa15.62■□□□□ 0.09
SCLT1-209ENST00000511426 ACSL4O60488 711 aa15.62■□□□□ 0.09
SCLT1-209ENST00000511426 TTC4O95801 387 aa15.62■□□□□ 0.09
SCLT1-209ENST00000511426 HNRNPA1P09651 372 aaKnown RBP eCLIP15.62■□□□□ 0.09
SCLT1-209ENST00000511426 VAV1P15498 845 aa15.62■□□□□ 0.09
SCLT1-209ENST00000511426 DDX6P26196 483 aaKnown RBP eCLIP15.62■□□□□ 0.09
SCLT1-209ENST00000511426 CLCN4P51793 760 aa15.62■□□□□ 0.09
SCLT1-209ENST00000511426 YBEYP58557 167 aaPredicted RBP15.62■□□□□ 0.09
SCLT1-209ENST00000511426 ERVK-21P61565 698 aa15.62■□□□□ 0.09
SCLT1-209ENST00000511426 PARP6Q2NL67 630 aa15.62■□□□□ 0.09
SCLT1-209ENST00000511426 ANKRD20A2Q5SQ80 823 aa15.62■□□□□ 0.09
SCLT1-209ENST00000511426 ANKRD20A1Q5TYW2 823 aa15.62■□□□□ 0.09
SCLT1-209ENST00000511426 TTC39BQ5VTQ0 682 aaPredicted RBP15.62■□□□□ 0.09
SCLT1-209ENST00000511426 ANKRD20A3Q5VUR7 823 aa15.62■□□□□ 0.09
SCLT1-209ENST00000511426 ITPRIPL1Q6GPH6 555 aa15.62■□□□□ 0.09
SCLT1-209ENST00000511426 CCDC13Q8IYE1 715 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms