RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 AHI1Q8N157 1196 aa16.68■□□□□ 0.26
PDLIM5-212ENST00000509333 CYB5D2Q8WUJ1 264 aa16.68■□□□□ 0.26
PDLIM5-212ENST00000509333 MRGPRX1Q96LB2 322 aa16.68■□□□□ 0.26
PDLIM5-212ENST00000509333 C1orf74Q96LT6 269 aa16.68■□□□□ 0.26
PDLIM5-212ENST00000509333 TKTL2Q9H0I9 626 aa16.68■□□□□ 0.26
PDLIM5-212ENST00000509333 ARRDC1-AS1Q9H2J1 176 aa16.68■□□□□ 0.26
PDLIM5-212ENST00000509333 TMEM245Q9H330 911 aa16.68■□□□□ 0.26
PDLIM5-212ENST00000509333 ADAM22Q9P0K1 906 aa16.68■□□□□ 0.26
PDLIM5-212ENST00000509333 KIAA1522Q9P206 1035 aaPredicted RBP16.68■□□□□ 0.26
PDLIM5-212ENST00000509333 BCCIPQ9P287 314 aaKnown RBP eCLIP16.68■□□□□ 0.26
PDLIM5-212ENST00000509333 CEP250Q9BV73 2442 aa16.68■□□□□ 0.26
PDLIM5-212ENST00000509333 F5H5T6 163 aa16.67■□□□□ 0.26
PDLIM5-212ENST00000509333 ATP5BP06576 529 aaKnown RBP16.67■□□□□ 0.26
PDLIM5-212ENST00000509333 C7P10643 843 aa16.67■□□□□ 0.26
PDLIM5-212ENST00000509333 POLR2EP19388 210 aaKnown RBP16.67■□□□□ 0.26
PDLIM5-212ENST00000509333 NDUFV2P19404 249 aa16.67■□□□□ 0.26
PDLIM5-212ENST00000509333 TNFAIP3P21580 790 aa16.67■□□□□ 0.26
PDLIM5-212ENST00000509333 PRKCHP24723 683 aa16.67■□□□□ 0.26
PDLIM5-212ENST00000509333 PBX1P40424 430 aa16.67■□□□□ 0.26
PDLIM5-212ENST00000509333 SULT1E1P49888 294 aa16.67■□□□□ 0.26
PDLIM5-212ENST00000509333 PLK1P53350 603 aa16.67■□□□□ 0.26
PDLIM5-212ENST00000509333 ATXN1P54253 815 aaKnown RBP16.67■□□□□ 0.26
PDLIM5-212ENST00000509333 DEUP1Q05D60 604 aa16.67■□□□□ 0.26
PDLIM5-212ENST00000509333 CCDC14Q49A88 953 aa16.67■□□□□ 0.26
PDLIM5-212ENST00000509333 BRMS1LQ5PSV4 323 aa16.67■□□□□ 0.26
PDLIM5-212ENST00000509333 ACAD10Q6JQN1 1059 aa16.67■□□□□ 0.26
PDLIM5-212ENST00000509333 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.67■□□□□ 0.26
PDLIM5-212ENST00000509333 C11orf74Q86VG3 221 aa16.67■□□□□ 0.26
PDLIM5-212ENST00000509333 EMC1Q8N766 993 aa16.67■□□□□ 0.26
PDLIM5-212ENST00000509333 RXFP2Q8WXD0 754 aa16.67■□□□□ 0.26
PDLIM5-212ENST00000509333 C11orf70Q9BRQ4 267 aa16.67■□□□□ 0.26
PDLIM5-212ENST00000509333 TTYH3Q9C0H2 523 aa16.67■□□□□ 0.26
PDLIM5-212ENST00000509333 MKRN2Q9H000 416 aaKnown RBP16.67■□□□□ 0.26
PDLIM5-212ENST00000509333 SIK2Q9H0K1 926 aa16.67■□□□□ 0.26
PDLIM5-212ENST00000509333 SLC6A17Q9H1V8 727 aa16.67■□□□□ 0.26
PDLIM5-212ENST00000509333 TCRBV5S1A1TA0A578 114 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 TYW5A2RUC4 315 aaKnown RBP16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 C2CD4BA6NLJ0 364 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 LRRC53A6NM62 1247 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 SIGLEC16A6NMB1 481 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 DRGXA6NNA5 263 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 H0Y626 953 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 EPN2O95208 641 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 HLA-EP13747 358 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 PDGFRAP16234 1089 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 RFC1P35251 1148 aaPredicted RBP16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 CSKP41240 450 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 NSFP46459 744 aaKnown RBP16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 UBASH3AP57075 661 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 STARD3Q14849 445 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 CSRP2Q16527 193 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 FIGNQ5HY92 759 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 PLA2G2CQ5R387 149 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 SH3PXD2AQ5TCZ1 1133 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 PMS2CLQ68D20 193 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 WDR59Q6PJI9 974 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 SND1Q7KZF4 910 aaKnown RBP eCLIP16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 TMPRSS6Q8IU80 811 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 CCDC117Q8IWD4 279 aaPredicted RBP16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 ZNF683Q8IZ20 524 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 APCDD1Q8J025 514 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 CCAR2Q8N163 923 aaKnown RBP16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 JOSD2Q8TAC2 188 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 CENPIQ92674 756 aaPredicted RBP16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 ALG14Q96F25 216 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 MYO19Q96H55 970 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 MRGPRX3Q96LB0 322 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 CFAP57Q96MR6 1250 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 ITM2CQ9NQX7 267 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 TMPRSS4Q9NRS4 437 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 SEMA4GQ9NTN9 838 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 VANGL2Q9ULK5 521 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 PCDHGA5Q9Y5G8 931 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 SNX10Q9Y5X0 201 aa16.66■□□□□ 0.26
PDLIM5-212ENST00000509333 MAP3K13O43283 966 aa16.65■□□□□ 0.26
PDLIM5-212ENST00000509333 SYNCRIPO60506 623 aaKnown RBP16.65■□□□□ 0.26
PDLIM5-212ENST00000509333 GJB6O95452 261 aa16.65■□□□□ 0.26
PDLIM5-212ENST00000509333 ZNF806P0C7X5 589 aa16.65■□□□□ 0.26
PDLIM5-212ENST00000509333 KRT3P12035 628 aa16.65■□□□□ 0.26
PDLIM5-212ENST00000509333 PRKCIP41743 596 aa16.65■□□□□ 0.26
PDLIM5-212ENST00000509333 IRAK1P51617 712 aa16.65■□□□□ 0.26
PDLIM5-212ENST00000509333 COPAP53621 1224 aa16.65■□□□□ 0.26
PDLIM5-212ENST00000509333 GSCP56915 257 aaPredicted RBP16.65■□□□□ 0.26
PDLIM5-212ENST00000509333 TPM4P67936 248 aa16.65■□□□□ 0.26
PDLIM5-212ENST00000509333 CAMK2GQ13555 558 aaPredicted RBP16.65■□□□□ 0.26
PDLIM5-212ENST00000509333 CDH18Q13634 790 aa16.65■□□□□ 0.26
PDLIM5-212ENST00000509333 ELF2Q15723 593 aa16.65■□□□□ 0.26
PDLIM5-212ENST00000509333 RAB6CQ53S08 254 aa16.65■□□□□ 0.26
PDLIM5-212ENST00000509333 SERPINA13PQ6UXR4 307 aa16.65■□□□□ 0.26
PDLIM5-212ENST00000509333 MON1BQ7L1V2 547 aa16.65■□□□□ 0.26
PDLIM5-212ENST00000509333 RPRD1AQ96P16 312 aaPredicted RBP16.65■□□□□ 0.26
PDLIM5-212ENST00000509333 HAPLN3Q96S86 360 aa16.65■□□□□ 0.26
PDLIM5-212ENST00000509333 NUP58Q9BVL2 599 aa16.65■□□□□ 0.26
PDLIM5-212ENST00000509333 RAB6CQ9H0N0 254 aa16.65■□□□□ 0.26
PDLIM5-212ENST00000509333 HAUS4Q9H6D7 363 aa16.65■□□□□ 0.26
PDLIM5-212ENST00000509333 PRDM16Q9HAZ2 1276 aa16.65■□□□□ 0.26
PDLIM5-212ENST00000509333 METTL5Q9NRN9 209 aaKnown RBP16.65■□□□□ 0.26
PDLIM5-212ENST00000509333 TAS2R14Q9NYV8 317 aa16.65■□□□□ 0.26
PDLIM5-212ENST00000509333 SUN2Q9UH99 717 aa16.65■□□□□ 0.26
PDLIM5-212ENST00000509333 SLCO3A1Q9UIG8 710 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms