RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 CXorf57Q6NSI4 855 aaKnown RBP7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 CAPN12Q6ZSI9 719 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 RSRC2Q7L4I2 434 aaKnown RBP7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 ZNF677Q86XU0 584 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 C1orf210Q8IVY1 113 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 VSTM4Q8IW00 320 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 ARFGAP1Q8N6T3 406 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 IL17RCQ8NAC3 791 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 TSEN2Q8NCE0 465 aaKnown RBP7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 TMEM35BQ8NCS4 154 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 RPLP0P6Q8NHW5 317 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 SORCS1Q8WY21 1168 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 IGSF8Q969P0 613 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 MYO19Q96H55 970 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 CFAP57Q96MR6 1250 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 HHIPQ96QV1 700 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 SPAG5Q96R06 1193 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 HAUS4Q9H6D7 363 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 POPDC2Q9HBU9 364 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 DNAJC17Q9NVM6 304 aaKnown RBP7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 ARHGAP20Q9P2F6 1191 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 INTS6Q9UL03 887 aaKnown RBP7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 MAP4K5Q9Y4K4 846 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 R4GN57 208 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 ZFHX2Q9C0A1 2572 aaPredicted RBP7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 PLXND1Q9Y4D7 1925 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 SYNJ2BP-COX16A0A087WUM0 186 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 A0A1W2PQF6 199 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 TMEM229AB2RXF0 380 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 TERTO14746 1132 aaKnown RBP7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 CCP110O43303 1012 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 ACSL4O60488 711 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 KAT7O95251 611 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 SERPINC1P01008 464 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 GLI1P08151 1106 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 TIMP2P16035 220 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 FERP16591 822 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 RRM1P23921 792 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 PRKCHP24723 683 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 KRT9P35527 623 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 EIF2DP41214 584 aaKnown RBP7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 MATKP42679 507 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 SULT1E1P49888 294 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 HDAC4P56524 1084 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 UBASH3AP57075 661 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 BPIFB4P59827 614 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 RPL7AP62424 266 aaKnown RBP7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 YWHAZP63104 245 aaKnown RBP7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 GAD2Q05329 585 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 ASTE1Q2TB18 679 aaPredicted RBP7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 C2orf27AQ580R0 203 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 DCAF6Q58WW2 860 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 MS4A13Q5J8X5 152 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 MANEALQ5VSG8 457 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 DAB2IPQ5VWQ8 1189 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 KIAA1211LQ6NV74 962 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 SARM1Q6SZW1 724 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 ASCL5Q7RTU5 278 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 KIAA0907Q7Z7F0 614 aaPredicted RBP7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 ADIPOR2Q86V24 386 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 MCOLN2Q8IZK6 566 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 CFAP52Q8N1V2 620 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 ALLCQ8N6M5 410 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 CCDC185Q8N715 623 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 ANKRD20A12PQ8NF67 263 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 IPO4Q8TEX9 1081 aaKnown RBP7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 RNF139Q8WU17 664 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 VOPP1Q96AW1 172 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 OTUB2Q96DC9 234 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 ARHGEF26Q96DR7 871 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 ERLEC1Q96DZ1 483 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 SHDQ96IW2 340 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 SERPINB11Q96P15 392 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 PEBP4Q96S96 227 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 CDK5RAP1Q96SZ6 601 aaKnown RBP7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 BBS2Q9BXC9 721 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 PACSIN1Q9BY11 444 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 DNAI2Q9GZS0 605 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 SLC6A17Q9H1V8 727 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 FAM204AQ9H8W3 233 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 ARHGEF4Q9NR80 690 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 OLA1Q9NTK5 396 aaKnown RBP7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 SPATA6Q9NWH7 488 aaPredicted RBP7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 DDIT4Q9NX09 232 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 ARHGEF38Q9NXL2 777 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 AIPL1Q9NZN9 384 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 COX16Q9P0S2 106 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 TBC1D14Q9P2M4 693 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 DCTN4Q9UJW0 460 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 LSM7Q9UK45 103 aaKnown RBP7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 MYO6Q9UM54 1294 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 TLR6Q9Y2C9 796 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 HCN4Q9Y3Q4 1203 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 RAD54BQ9Y620 910 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 HS3ST4Q9Y661 456 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 CHD5Q8TDI0 1954 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 SPEGQ15772 3267 aa7.47□□□□□ -1.21
TOPBP1-207ENST00000509162 A0A0A0MRY4 1105 aa7.46□□□□□ -1.22
TOPBP1-207ENST00000509162 FAM72CH0Y354 149 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms