RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 SHISA7A6NL88 538 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 CHURC1-FNTBB4DL54 471 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 RNF40O75150 1001 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 GJB6O95452 261 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 TFE3P19532 575 aaPredicted RBP9.43□□□□□ -0.9
NUP54-207ENST00000508583 FECHP22830 423 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 ADRA1BP35368 520 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 ETFBP38117 255 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 ARHGAP25P42331 645 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 CXCL12P48061 93 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 SLC6A11P48066 632 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 MRE11P49959 708 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 RPS24P62847 133 aaKnown RBP9.43□□□□□ -0.9
NUP54-207ENST00000508583 KRT83P78385 493 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 SULT2A1Q06520 285 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 ZNF177Q13360 481 aaPredicted RBP9.43□□□□□ -0.9
NUP54-207ENST00000508583 HADHQ16836 314 aaKnown RBP9.43□□□□□ -0.9
NUP54-207ENST00000508583 C6orf118Q5T5N4 469 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 RNF43Q68DV7 783 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 FBXL22Q6P050 247 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 ZNF783Q6ZMS7 281 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 SETD3Q86TU7 594 aaPredicted RBP9.43□□□□□ -0.9
NUP54-207ENST00000508583 C1orf210Q8IVY1 113 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 PHTF2Q8N3S3 785 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 CARNMT1Q8N4J0 409 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.43□□□□□ -0.9
NUP54-207ENST00000508583 ZNF513Q8N8E2 541 aaPredicted RBP9.43□□□□□ -0.9
NUP54-207ENST00000508583 RFFLQ8WZ73 363 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 PRICKLE1Q96MT3 831 aaPredicted RBP9.43□□□□□ -0.9
NUP54-207ENST00000508583 FAM126AQ9BYI3 521 aaPredicted RBP9.43□□□□□ -0.9
NUP54-207ENST00000508583 ZYG11BQ9C0D3 744 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 ABCB8Q9NUT2 735 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 SPTLC3Q9NUV7 552 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 DLGAP2Q9P1A6 1054 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 CALCOCO1Q9P1Z2 691 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 STIM2Q9P246 746 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 PPARGC1AQ9UBK2 798 aaKnown RBP9.43□□□□□ -0.9
NUP54-207ENST00000508583 OR12D3Q9UGF7 316 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 GGA2Q9UJY4 613 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 FBXO4Q9UKT5 387 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 VANGL2Q9ULK5 521 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 NENFQ9UMX5 172 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 SLC8A2Q9UPR5 921 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 MTF2Q9Y483 593 aaPredicted RBP9.43□□□□□ -0.9
NUP54-207ENST00000508583 EPN1Q9Y6I3 576 aaPredicted RBP9.43□□□□□ -0.9
NUP54-207ENST00000508583 ZNF318Q5VUA4 2279 aa9.43□□□□□ -0.9
NUP54-207ENST00000508583 IGLV3-10A0A075B6K4 115 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 GOLGA6L7A0A1B0GV03 622 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 E9PAM4 449 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 K7EQS6 105 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 FGF10O15520 208 aaPredicted RBP9.42□□□□□ -0.9
NUP54-207ENST00000508583 PI15O43692 258 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 ALDH1A2O94788 518 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 NDUFA10O95299 355 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 PAPSS2O95340 614 aaPredicted RBP9.42□□□□□ -0.9
NUP54-207ENST00000508583 LCA5LO95447 670 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 ASLP04424 464 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 CISD3P0C7P0 127 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 PABPC1P11940 636 aaKnown RBP9.42□□□□□ -0.9
NUP54-207ENST00000508583 POLR2EP19388 210 aaKnown RBP9.42□□□□□ -0.9
NUP54-207ENST00000508583 L1CAMP32004 1257 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 MAN1A1P33908 653 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 NNMTP40261 264 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 MAGEA1P43355 309 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 PTPN5P54829 565 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 MTAPQ13126 283 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 ZNF528Q3MIS6 628 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 C5orf22Q49AR2 442 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 BOLA3Q53S33 107 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 ERMARDQ5T6L9 678 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 RNF219Q5W0B1 726 aaPredicted RBP9.42□□□□□ -0.9
NUP54-207ENST00000508583 ZC3H14Q6PJT7 736 aaKnown RBP9.42□□□□□ -0.9
NUP54-207ENST00000508583 SYT13Q7L8C5 426 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 CCAR2Q8N163 923 aaKnown RBP9.42□□□□□ -0.9
NUP54-207ENST00000508583 CFAP52Q8N1V2 620 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 CAMKK1Q8N5S9 505 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 RPLP0P6Q8NHW5 317 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 USP33Q8TEY7 942 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 TBC1D31Q96DN5 1066 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 ADAM33Q9BZ11 813 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 CIPCQ9C0C6 399 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 CATSPERBQ9H7T0 1116 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 POLMQ9NP87 494 aaPredicted RBP9.42□□□□□ -0.9
NUP54-207ENST00000508583 RBM12Q9NTZ6 932 aaKnown RBP9.42□□□□□ -0.9
NUP54-207ENST00000508583 XPO7Q9UIA9 1087 aaKnown RBP9.42□□□□□ -0.9
NUP54-207ENST00000508583 USP18Q9UMW8 372 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 PLA2G4CQ9UP65 541 aa9.42□□□□□ -0.9
NUP54-207ENST00000508583 ARIH1Q9Y4X5 557 aaPredicted RBP9.42□□□□□ -0.9
NUP54-207ENST00000508583 A0A0A6YYK5 440 aaPredicted RBP9.41□□□□□ -0.9
NUP54-207ENST00000508583 DRGXA6NNA5 263 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 SYNCRIPO60506 623 aaKnown RBP9.41□□□□□ -0.9
NUP54-207ENST00000508583 SRGAP2O75044 1071 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 LRCH4O75427 683 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 MTA2O94776 668 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 RHOCP08134 193 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 KRT7P08729 469 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 DLDP09622 509 aaKnown RBP9.41□□□□□ -0.9
NUP54-207ENST00000508583 HNRNPLP14866 589 aaKnown RBP eCLIP9.41□□□□□ -0.9
NUP54-207ENST00000508583 RHOQP17081 205 aa9.41□□□□□ -0.9
NUP54-207ENST00000508583 MIPP30301 263 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms