RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 TRIM54Q9BYV2 358 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 OSBPL6Q9BZF3 934 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 REXO4Q9GZR2 422 aaKnown RBP4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 BRD8Q9H0E9 1235 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 MUC13Q9H3R2 512 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 SMURF2Q9HAU4 748 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 IL21RQ9HBE5 538 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 TBC1D23Q9NUY8 699 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 POLR3BQ9NW08 1133 aaPredicted RBP4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 HCFC1R1Q9NWW0 138 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 ZDHHC7Q9NXF8 308 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 TAB2Q9NYJ8 693 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 NINJ2Q9NZG7 142 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 SELENONQ9NZV5 590 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 CALCOCO1Q9P1Z2 691 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 SCOCQ9UIL1 159 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 ANAPC5Q9UJX4 755 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 PTBP2Q9UKA9 531 aaKnown RBP4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 DNAJC16Q9Y2G8 782 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 KIF3AQ9Y496 699 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 PCDHA1Q9Y5I3 950 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 LYVE1Q9Y5Y7 322 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 SQORQ9Y6N5 450 aa4.56□□□□□ -1.68
SMARCA5-202ENST00000508573 VWA3AA6NCI4 1184 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 ZSCAN5CA6NGD5 496 aaPredicted RBP4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 URADA6NGE7 173 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 TP73O15350 636 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 HNRNPRO43390 633 aaKnown RBP4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 EXOC3O60645 756 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 KRT38O76015 456 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 CSPG5O95196 566 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 APOL3O95236 402 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 GCNT3O95395 438 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 METTL18O95568 372 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 OPN1MWP04001 364 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 OPN1MW2P0DN77 364 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 OPN1MW3P0DN78 364 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 IL1R1P14778 569 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 TMEM11P17152 192 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 FBLP22087 321 aaKnown RBP4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 CCNCP24863 283 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 GRK5P34947 590 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 BMPR1AP36894 532 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 MATR3P43243 847 aaKnown RBP eCLIP4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 PSMC4P43686 418 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 ATP5OP48047 213 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 HARS2P49590 506 aaKnown RBP4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 HNMTP50135 292 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 CCNA1P78396 465 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 MRPS5P82675 430 aaKnown RBP4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 PPP3CAQ08209 521 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 SCAPQ12770 1279 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 MAN2A1Q16706 1144 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 SMU1Q2TAY7 513 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 KHDC1Q4VXA5 237 aaKnown RBP4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 CAVIN4Q5BKX8 364 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 KHDC1LQ5JSQ8 128 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 TMTC4Q5T4D3 741 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 ERMARDQ5T6L9 678 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 HECTD2Q5U5R9 776 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 ADALQ6DHV7 355 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 SLC30A9Q6PML9 568 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 RGS9BPQ6ZS82 235 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 BMP8AQ7Z5Y6 402 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 KIAA2013Q8IYS2 634 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 DPP10Q8N608 796 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 ANKRD20A12PQ8NF67 263 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 SPATA20Q8TB22 786 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 RNF139Q8WU17 664 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 FATE1Q969F0 183 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 RAB24Q969Q5 203 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 ZNF653Q96CK0 615 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 FAM167AQ96KS9 214 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 FAM210AQ96ND0 272 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 GBP5Q96PP8 586 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 VRK1Q99986 396 aaPredicted RBP4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 CPPED1Q9BRF8 314 aaPredicted RBP4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 ZPBPQ9BS86 351 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 RTKNQ9BST9 563 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 FUZQ9BT04 418 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 TCHPQ9BT92 498 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 MYL10Q9BUA6 226 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 APOL6Q9BWW8 343 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 MAGEB5Q9BZ81 275 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 DPH1Q9BZG8 443 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 KRT23Q9C075 422 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 WNT8AQ9H1J5 351 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 ZNF768Q9H5H4 540 aaKnown RBP4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 NOD2Q9HC29 1040 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 HOOK1Q9UJC3 728 aaKnown RBP4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 AJAP1Q9UKB5 411 aaPredicted RBP4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 CPSF3Q9UKF6 684 aaKnown RBP4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 CORO1CQ9ULV4 474 aaPredicted RBP4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 NUMBLQ9Y6R0 609 aa4.55□□□□□ -1.68
SMARCA5-202ENST00000508573 SPAG9O60271 1321 aaKnown RBP4.54□□□□□ -1.68
SMARCA5-202ENST00000508573 GRID2IPA4D2P6 1211 aa4.54□□□□□ -1.68
SMARCA5-202ENST00000508573 CCDC169A6NNP5 214 aa4.54□□□□□ -1.68
SMARCA5-202ENST00000508573 LACTBL1A8MY62 500 aa4.54□□□□□ -1.68
SMARCA5-202ENST00000508573 E7EVH7 732 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms