RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 HEMK1Q9Y5R4 338 aaPredicted RBP6.62□□□□□ -1.35
HERC4-213ENST00000506515 POLR2AP24928 1970 aaKnown RBP6.62□□□□□ -1.35
HERC4-213ENST00000506515 PTPRTO14522 1441 aa6.61□□□□□ -1.35
HERC4-213ENST00000506515 TCRBV5S1A1TA0A578 114 aa6.61□□□□□ -1.35
HERC4-213ENST00000506515 TARM1B6A8C7 271 aa6.61□□□□□ -1.35
HERC4-213ENST00000506515 H3BNC9 293 aa6.61□□□□□ -1.35
HERC4-213ENST00000506515 SMIM22K7EJ46 135 aa6.61□□□□□ -1.35
HERC4-213ENST00000506515 FSHBP01225 129 aa6.61□□□□□ -1.35
HERC4-213ENST00000506515 CPA1P15085 419 aa6.61□□□□□ -1.35
HERC4-213ENST00000506515 ATF7P17544 494 aaPredicted RBP6.61□□□□□ -1.35
HERC4-213ENST00000506515 GPD1P21695 349 aa6.61□□□□□ -1.35
HERC4-213ENST00000506515 STAT6P42226 847 aa6.61□□□□□ -1.35
HERC4-213ENST00000506515 GDF5P43026 501 aa6.61□□□□□ -1.35
HERC4-213ENST00000506515 ANKRD1Q15327 319 aa6.61□□□□□ -1.35
HERC4-213ENST00000506515 SLC4A8Q2Y0W8 1093 aa6.61□□□□□ -1.35
HERC4-213ENST00000506515 TMTC1Q8IUR5 882 aa6.61□□□□□ -1.35
HERC4-213ENST00000506515 ESX1Q8N693 406 aa6.61□□□□□ -1.35
HERC4-213ENST00000506515 AMER2Q8N7J2 671 aa6.61□□□□□ -1.35
HERC4-213ENST00000506515 SRFBP1Q8NEF9 429 aaKnown RBP6.61□□□□□ -1.35
HERC4-213ENST00000506515 IL17REQ8NFR9 667 aa6.61□□□□□ -1.35
HERC4-213ENST00000506515 LINS1Q8NG48 757 aa6.61□□□□□ -1.35
HERC4-213ENST00000506515 PNISRQ8TF01 805 aaKnown RBP6.61□□□□□ -1.35
HERC4-213ENST00000506515 ARRDC3Q96B67 414 aa6.61□□□□□ -1.35
HERC4-213ENST00000506515 PRDM16Q9HAZ2 1276 aa6.61□□□□□ -1.35
HERC4-213ENST00000506515 RASSF1Q9NS23 344 aa6.61□□□□□ -1.35
HERC4-213ENST00000506515 B3GNT3Q9Y2A9 372 aa6.61□□□□□ -1.35
HERC4-213ENST00000506515 COPG1Q9Y678 874 aaKnown RBP6.61□□□□□ -1.35
HERC4-213ENST00000506515 ABCA8O94911 1581 aa6.61□□□□□ -1.35
HERC4-213ENST00000506515 ATP10BO94823 1461 aa6.6□□□□□ -1.35
HERC4-213ENST00000506515 FHOD3Q2V2M9 1422 aa6.6□□□□□ -1.35
HERC4-213ENST00000506515 UHRF1BP1Q6BDS2 1440 aa6.6□□□□□ -1.35
HERC4-213ENST00000506515 A0A1B0GVC2 190 aa6.6□□□□□ -1.35
HERC4-213ENST00000506515 C3orf70A6NLC5 250 aaPredicted RBP6.6□□□□□ -1.35
HERC4-213ENST00000506515 H7C1Q1 480 aa6.6□□□□□ -1.35
HERC4-213ENST00000506515 PRYO14603 147 aa6.6□□□□□ -1.35
HERC4-213ENST00000506515 HNRNPRO43390 633 aaKnown RBP6.6□□□□□ -1.35
HERC4-213ENST00000506515 CHN1P15882 459 aa6.6□□□□□ -1.35
HERC4-213ENST00000506515 CD53P19397 219 aa6.6□□□□□ -1.35
HERC4-213ENST00000506515 WT1P19544 449 aaPredicted RBP6.6□□□□□ -1.35
HERC4-213ENST00000506515 NDUFS1P28331 727 aa6.6□□□□□ -1.35
HERC4-213ENST00000506515 ACVRL1P37023 503 aa6.6□□□□□ -1.35
HERC4-213ENST00000506515 PTH2RP49190 550 aa6.6□□□□□ -1.35
HERC4-213ENST00000506515 SOX10P56693 466 aa6.6□□□□□ -1.35
HERC4-213ENST00000506515 SLC14A1Q13336 389 aa6.6□□□□□ -1.35
HERC4-213ENST00000506515 TRPC3Q13507 836 aa6.6□□□□□ -1.35
HERC4-213ENST00000506515 LARS2Q15031 903 aaKnown RBP6.6□□□□□ -1.35
HERC4-213ENST00000506515 CC2D1BQ5T0F9 858 aaKnown RBP6.6□□□□□ -1.35
HERC4-213ENST00000506515 TMEM63BQ5T3F8 832 aa6.6□□□□□ -1.35
HERC4-213ENST00000506515 VSTM1Q6UX27 236 aa6.6□□□□□ -1.35
HERC4-213ENST00000506515 LAS2Q8IYD9 372 aa6.6□□□□□ -1.35
HERC4-213ENST00000506515 PTGR2Q8N8N7 351 aaPredicted RBP6.6□□□□□ -1.35
HERC4-213ENST00000506515 ADAMTS18Q8TE60 1221 aa6.6□□□□□ -1.35
HERC4-213ENST00000506515 GPR78Q96P69 363 aa6.6□□□□□ -1.35
HERC4-213ENST00000506515 FYTTD1Q96QD9 318 aaKnown RBP6.6□□□□□ -1.35
HERC4-213ENST00000506515 HERC2P3Q9BVR0 1158 aa6.6□□□□□ -1.35
HERC4-213ENST00000506515 RNF26Q9BY78 433 aaPredicted RBP6.6□□□□□ -1.35
HERC4-213ENST00000506515 SCAND2PQ9GZW5 306 aaPredicted RBP6.6□□□□□ -1.35
HERC4-213ENST00000506515 CLPBQ9H078 707 aa6.6□□□□□ -1.35
HERC4-213ENST00000506515 ASNSD1Q9NWL6 643 aa6.6□□□□□ -1.35
HERC4-213ENST00000506515 SEMA5BQ9P283 1151 aa6.6□□□□□ -1.35
HERC4-213ENST00000506515 ANAPC4Q9UJX5 808 aa6.6□□□□□ -1.35
HERC4-213ENST00000506515 WNT6Q9Y6F9 365 aa6.6□□□□□ -1.35
HERC4-213ENST00000506515 ABCA9Q8IUA7 1624 aa6.6□□□□□ -1.35
HERC4-213ENST00000506515 CYP3A7-CYP3A51PA0A087WV96 503 aa6.59□□□□□ -1.35
HERC4-213ENST00000506515 GRM8O00222 908 aa6.59□□□□□ -1.35
HERC4-213ENST00000506515 TOM1O60784 492 aa6.59□□□□□ -1.35
HERC4-213ENST00000506515 CNPP09543 421 aaKnown RBP6.59□□□□□ -1.35
HERC4-213ENST00000506515 CSF1P09603 554 aa6.59□□□□□ -1.35
HERC4-213ENST00000506515 XBP1P17861 261 aa6.59□□□□□ -1.35
HERC4-213ENST00000506515 CYP3A7P24462 503 aa6.59□□□□□ -1.35
HERC4-213ENST00000506515 CCR5P51681 352 aa6.59□□□□□ -1.35
HERC4-213ENST00000506515 INHBCP55103 352 aa6.59□□□□□ -1.35
HERC4-213ENST00000506515 SLC37A1P57057 533 aa6.59□□□□□ -1.35
HERC4-213ENST00000506515 TLE2Q04725 743 aa6.59□□□□□ -1.35
HERC4-213ENST00000506515 CHRNDQ07001 517 aa6.59□□□□□ -1.35
HERC4-213ENST00000506515 KPNB1Q14974 876 aaKnown RBP6.59□□□□□ -1.35
HERC4-213ENST00000506515 ZNF362Q5T0B9 420 aaPredicted RBP6.59□□□□□ -1.35
HERC4-213ENST00000506515 MAP3K21Q5TCX8 1036 aa6.59□□□□□ -1.35
HERC4-213ENST00000506515 SLC39A5Q6ZMH5 540 aa6.59□□□□□ -1.35
HERC4-213ENST00000506515 DBX2Q6ZNG2 339 aa6.59□□□□□ -1.35
HERC4-213ENST00000506515 HEATR4Q86WZ0 1026 aa6.59□□□□□ -1.35
HERC4-213ENST00000506515 STAMQ92783 540 aa6.59□□□□□ -1.35
HERC4-213ENST00000506515 REEP2Q9BRK0 252 aa6.59□□□□□ -1.35
HERC4-213ENST00000506515 GAR1Q9NY12 217 aaKnown RBP6.59□□□□□ -1.35
HERC4-213ENST00000506515 SERGEFQ9UGK8 458 aa6.59□□□□□ -1.35
HERC4-213ENST00000506515 EFCAB5A4FU69 1503 aa6.59□□□□□ -1.35
HERC4-213ENST00000506515 MADDQ8WXG6 1647 aa6.58□□□□□ -1.36
HERC4-213ENST00000506515 SPATA31A1Q5TZJ5 1347 aa6.58□□□□□ -1.36
HERC4-213ENST00000506515 CFAP74Q9C0B2 1584 aa6.58□□□□□ -1.36
HERC4-213ENST00000506515 VWA3AA6NCI4 1184 aa6.58□□□□□ -1.36
HERC4-213ENST00000506515 C16orf96A6NNT2 1141 aa6.58□□□□□ -1.36
HERC4-213ENST00000506515 BTBD19C9JJ37 291 aa6.58□□□□□ -1.36
HERC4-213ENST00000506515 HOXC11O43248 304 aaPredicted RBP6.58□□□□□ -1.36
HERC4-213ENST00000506515 ACP5P13686 325 aa6.58□□□□□ -1.36
HERC4-213ENST00000506515 SFPQP23246 707 aaKnown RBP eCLIP6.58□□□□□ -1.36
HERC4-213ENST00000506515 HOXD12P35452 270 aa6.58□□□□□ -1.36
HERC4-213ENST00000506515 SHC2P98077 582 aa6.58□□□□□ -1.36
HERC4-213ENST00000506515 CDK18Q07002 472 aa6.58□□□□□ -1.36
HERC4-213ENST00000506515 DPTQ07507 201 aa6.58□□□□□ -1.36
HERC4-213ENST00000506515 RANBP10Q6VN20 620 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms