RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 TXNL4AP83876 142 aaKnown RBP3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 E2F1Q01094 437 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 DEUP1Q05D60 604 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 CCDC15Q0P6D6 951 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 TP53BP2Q13625 1128 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 THOC5Q13769 683 aaKnown RBP3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 PTPRRQ15256 657 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 SEC23BQ15437 767 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 CYP1B1Q16678 543 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 PLAC9Q5JTB6 97 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 ZNF585AQ6P3V2 769 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 MTHFD1LQ6UB35 978 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 C16orf89Q6UX73 402 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 DPY19L3Q6ZPD9 716 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 TMTC3Q6ZXV5 915 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 CHST13Q8NET6 341 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 ZMIZ2Q8NF64 920 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 RP9Q8TA86 221 aaKnown RBP3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 SLC25A43Q8WUT9 341 aaPredicted RBP3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 GLMPQ8WWB7 406 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 SH3KBP1Q96B97 665 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 FBXL20Q96IG2 436 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 PRR25Q96S07 402 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 CD180Q99467 661 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 NPAS1Q99742 590 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 SDF4Q9BRK5 362 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 STN1Q9H668 368 aaKnown RBP3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 ZNF703Q9H7S9 590 aaPredicted RBP3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 SYNPO2LQ9H987 977 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 SAP30LQ9HAJ7 183 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 VEZTQ9HBM0 779 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 SNX15Q9NRS6 342 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 KRT84Q9NSB2 600 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 PPP1R14DQ9NXH3 145 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 DKK3Q9UBP4 350 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 AMFRQ9UKV5 643 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 ASAP1Q9ULH1 1129 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 RCE1Q9Y256 329 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 PCDHB2Q9Y5E7 798 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 STRCQ7RTU9 1775 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 KIDINS220Q9ULH0 1771 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 CAMSAP1Q5T5Y3 1602 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 MYO3AQ8NEV4 1616 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 PLXNC1O60486 1568 aa3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 INO80Q9ULG1 1556 aaPredicted RBP3.55□□□□□ -1.84
TRAPPC11-205ENST00000506426 A2MP01023 1474 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 MTUS2Q5JR59 1369 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 CCNB3Q8WWL7 1395 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 CYP3A7-CYP3A51PA0A087WV96 503 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 TCERG1O14776 1098 aaKnown RBP3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 PEX1O43933 1283 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 DHX16O60231 1041 aaKnown RBP3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 LPXNO60711 386 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 F9P00740 461 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 ALDOAP04075 364 aaKnown RBP3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 CHRM2P08172 466 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 HSPA1AP0DMV8 641 aaKnown RBP3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 HSPA1BP0DMV9 641 aaKnown RBP3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 MYCLP12524 364 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 PEPDP12955 493 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 ACP5P13686 325 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 ZFXP17010 805 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 TGM1P22735 817 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 NR4A1P22736 598 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 RPS6KB1P23443 525 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 CYP3A7P24462 503 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 DUSP1P28562 367 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 CXCR5P32302 372 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 FOLR3P41439 243 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 CCT4P50991 539 aaKnown RBP3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 TAS2R50P59544 299 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 ARF3P61204 181 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 ARF1P84077 181 aaKnown RBP3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 SETQ01105 290 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 RUNDC3AQ59EK9 446 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 FAM69AQ5T7M9 428 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 ATF7IPQ6VMQ6 1270 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 B4GALNT4Q76KP1 1039 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 WDR53Q7Z5U6 358 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 C1orf210Q8IVY1 113 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 ARHGEF19Q8IW93 802 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 SRFBP1Q8NEF9 429 aaKnown RBP3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 ABHD11Q8NFV4 315 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 NOC3LQ8WTT2 800 aaKnown RBP3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 ERP27Q96DN0 273 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 TRMT61AQ96FX7 289 aaKnown RBP3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 MASTLQ96GX5 879 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 PRR11Q96HE9 360 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 LOXL4Q96JB6 756 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 PBKQ96KB5 322 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 NUDT16L1Q9BRJ7 211 aaKnown RBP3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 HERC2P3Q9BVR0 1158 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 PHF7Q9BWX1 381 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 KLC2Q9H0B6 622 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 IL21RQ9HBE5 538 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 ARHGEF3Q9NR81 526 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 KCTD5Q9NXV2 234 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 ALKBH4Q9NXW9 302 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 VPS4AQ9UN37 437 aa3.54□□□□□ -1.84
TRAPPC11-205ENST00000506426 FZD1Q9UP38 647 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms