RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 CUL2Q13617 745 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 KCNJ12Q14500 433 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 SHBQ15464 509 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 EDRF1Q3B7T1 1238 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 FNDC3BQ53EP0 1204 aaKnown RBP6.09□□□□□ -1.43
GYPB-205ENST00000505583 CCDC157Q569K6 752 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 FSCBQ5H9T9 825 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 ADGRF1Q5T601 910 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 PIK3R6Q5UE93 754 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 MBLAC2Q68D91 279 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 PMF1Q6P1K2 205 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 GATAD2AQ86YP4 633 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 CFAP52Q8N1V2 620 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 ARHGAP18Q8N392 663 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 CCDC150Q8NCX0 1101 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 SLC35F5Q8WV83 523 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 KCTD13Q8WZ19 329 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 ERCC4Q92889 916 aaPredicted RBP6.09□□□□□ -1.43
GYPB-205ENST00000505583 KAT5Q92993 513 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 MRGPRX3Q96LB0 322 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 SPATA32Q96LK8 384 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 PRICKLE1Q96MT3 831 aaPredicted RBP6.09□□□□□ -1.43
GYPB-205ENST00000505583 SLC6A18Q96N87 628 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 RSPH9Q9H1X1 276 aaPredicted RBP6.09□□□□□ -1.43
GYPB-205ENST00000505583 CAAP1Q9H8G2 361 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 LRRC4Q9HBW1 653 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 COQ4Q9Y3A0 265 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 HBS1LQ9Y450 684 aaKnown RBP6.09□□□□□ -1.43
GYPB-205ENST00000505583 PCDHGB2Q9Y5G2 931 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 LOC400499M0QZD8 3231 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 KNL1Q8NG31 2342 aa6.09□□□□□ -1.43
GYPB-205ENST00000505583 ANKRD11Q6UB99 2663 aaPredicted RBP6.08□□□□□ -1.44
GYPB-205ENST00000505583 FAM47DPA6NHR8 397 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 TBL1XO60907 577 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 SIN3BO75182 1162 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 ZNF202O95125 648 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 HSP90AA1P07900 732 aaKnown RBP6.08□□□□□ -1.44
GYPB-205ENST00000505583 DLDP09622 509 aaKnown RBP6.08□□□□□ -1.44
GYPB-205ENST00000505583 CD27P26842 260 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 CSKP41240 450 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 GRIA4P48058 902 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 METAP1P53582 386 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 BCAT1P54687 386 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 GALCP54803 685 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 ARID5AQ03989 594 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 BST2Q10589 180 aaKnown RBP6.08□□□□□ -1.44
GYPB-205ENST00000505583 SGO2Q562F6 1265 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 DCAF17Q5H9S7 520 aaPredicted RBP6.08□□□□□ -1.44
GYPB-205ENST00000505583 TCERG1LQ5VWI1 586 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 ANKRD40Q6AI12 368 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 MSANTD2Q6P1R3 559 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 IL27RAQ6UWB1 636 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 DHRS13Q6UX07 377 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 HSCBQ8IWL3 235 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 DHX40Q8IX18 779 aaKnown RBP6.08□□□□□ -1.44
GYPB-205ENST00000505583 AHI1Q8N157 1196 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 SIX6OS1Q8N1H7 587 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 WFIKKN2Q8TEU8 576 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 RNF139Q8WU17 664 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 GLMNQ92990 594 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 IGSF8Q969P0 613 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 SLC35C1Q96A29 364 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 FAXDC2Q96IV6 333 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 LRIG1Q96JA1 1093 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 FCRL2Q96LA5 508 aaPredicted RBP6.08□□□□□ -1.44
GYPB-205ENST00000505583 IPO9Q96P70 1041 aaKnown RBP6.08□□□□□ -1.44
GYPB-205ENST00000505583 CDC6Q99741 560 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 BTBD1Q9H0C5 482 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 NUCKS1Q9H1E3 243 aaKnown RBP6.08□□□□□ -1.44
GYPB-205ENST00000505583 PCED1AQ9H1Q7 454 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 PABPC3Q9H361 631 aaKnown RBP6.08□□□□□ -1.44
GYPB-205ENST00000505583 OSGEPQ9NPF4 335 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 ABCC13Q9NSE7 274 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 OLA1Q9NTK5 396 aaKnown RBP6.08□□□□□ -1.44
GYPB-205ENST00000505583 STIM2Q9P246 746 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 XPO7Q9UIA9 1087 aaKnown RBP6.08□□□□□ -1.44
GYPB-205ENST00000505583 SLCO3A1Q9UIG8 710 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 PLA2G4CQ9UP65 541 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 IGSF10Q6WRI0 2623 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 APC2O95996 2303 aa6.08□□□□□ -1.44
GYPB-205ENST00000505583 SHROOM3Q8TF72 1996 aa6.07□□□□□ -1.44
GYPB-205ENST00000505583 CABIN1Q9Y6J0 2220 aa6.07□□□□□ -1.44
GYPB-205ENST00000505583 A0A1B0GTQ1 180 aa6.07□□□□□ -1.44
GYPB-205ENST00000505583 A0A1W2PP55 124 aa6.07□□□□□ -1.44
GYPB-205ENST00000505583 A0A1W2PQ27 194 aa6.07□□□□□ -1.44
GYPB-205ENST00000505583 A0A1W2PQ64 194 aa6.07□□□□□ -1.44
GYPB-205ENST00000505583 TTC34A8MYJ7 566 aa6.07□□□□□ -1.44
GYPB-205ENST00000505583 PLK4O00444 970 aa6.07□□□□□ -1.44
GYPB-205ENST00000505583 CETN3O15182 167 aa6.07□□□□□ -1.44
GYPB-205ENST00000505583 MID1O15344 667 aa6.07□□□□□ -1.44
GYPB-205ENST00000505583 TNFSF14O43557 240 aa6.07□□□□□ -1.44
GYPB-205ENST00000505583 PCDHGA12O60330 932 aa6.07□□□□□ -1.44
GYPB-205ENST00000505583 ACSL4O60488 711 aa6.07□□□□□ -1.44
GYPB-205ENST00000505583 ZIC2O95409 532 aaPredicted RBP6.07□□□□□ -1.44
GYPB-205ENST00000505583 LATS1O95835 1130 aa6.07□□□□□ -1.44
GYPB-205ENST00000505583 DNTTP04053 509 aa6.07□□□□□ -1.44
GYPB-205ENST00000505583 ATP5BP06576 529 aaKnown RBP6.07□□□□□ -1.44
GYPB-205ENST00000505583 SETSIPP0DME0 302 aa6.07□□□□□ -1.44
GYPB-205ENST00000505583 EPB41P11171 864 aaKnown RBP6.07□□□□□ -1.44
GYPB-205ENST00000505583 VDRP11473 427 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms