RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 PNKPQ96T60 521 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 MFSD1Q9H3U5 465 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 FBRSL1Q9HCM7 1045 aaKnown RBP12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 TMPRSS4Q9NRS4 437 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 PLK2Q9NYY3 685 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 DEC1Q9P2X7 70 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 FZD10Q9ULW2 581 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 EML5Q05BV3 1969 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 FANCMQ8IYD8 2048 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 IGLV3-10A0A075B6K4 115 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 DRGXA6NNA5 263 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 BTNL10A8MVZ5 291 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 NCAM2O15394 837 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 NRDCO43847 1150 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 PRPSAP2O60256 369 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 TBL1XO60907 577 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 PROSCO94903 275 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 PDGFBP01127 241 aaPredicted RBP12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 CISD3P0C7P0 127 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 DRD1P21728 446 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 TARSP26639 723 aaKnown RBP12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 MAN1A1P33908 653 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 CLCN5P51795 746 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 CCZ1BP86790 482 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 CCZ1P86791 482 aaPredicted RBP12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 GRSF1Q12849 480 aaKnown RBP eCLIP12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 EFHC2Q5JST6 749 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 RABGAP1LQ5R372 815 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 ARTNQ5T4W7 220 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 ERMARDQ5T6L9 678 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 NAIF1Q69YI7 327 aaPredicted RBP12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 CWF19L1Q69YN2 538 aaKnown RBP12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 FSTL4Q6MZW2 842 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 LRRC31Q6UY01 552 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 CYP4V2Q6ZWL3 525 aaPredicted RBP12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 C14orf80Q86SX3 495 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 KIAA1328Q86T90 577 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 PSTKQ8IV42 348 aaKnown RBP12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 CFAP52Q8N1V2 620 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 TXLNBQ8N3L3 684 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 ZNF557Q8N988 423 aaPredicted RBP12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 PJA1Q8NG27 643 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 PBXIP1Q96AQ6 731 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 CALR3Q96L12 384 aaKnown RBP12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 RPRD1AQ96P16 312 aaPredicted RBP12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 FOXQ1Q9C009 403 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 C11orf16Q9NQ32 467 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 DNAJC17Q9NVM6 304 aaKnown RBP12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 OR12D3Q9UGF7 316 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 VANGL2Q9ULK5 521 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 USP18Q9UMW8 372 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 NDRG2Q9UN36 371 aaKnown RBP12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 SLC27A6Q9Y2P4 619 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 ANKRD36A6QL64 1941 aa12.29□□□□□ -0.44
PDLIM5-208ENST00000504489 MUC22E2RYF6 1773 aaPredicted RBP12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 A0A1B0GVM2 712 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 RCCD1A6NED2 376 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 TCAF2A6NFQ2 919 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 FAM170BA6NMN3 283 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 E9PAM4 449 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 TK2O00142 265 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 LUC7L3O95232 432 aaKnown RBP12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 KAT7O95251 611 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 APODP05090 189 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 CHRNB1P11230 501 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 L1CAMP32004 1257 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 GGCXP38435 758 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 GRIA2P42262 883 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 TNFRSF4P43489 277 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 NOP2P46087 812 aaKnown RBP12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 DGKGP49619 791 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 FZD5Q13467 585 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 CCINQ13939 588 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 MESDQ14696 234 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 UBXN2BQ14CS0 331 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 BOLA3Q53S33 107 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 DGKKQ5KSL6 1271 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 MANEALQ5VSG8 457 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 DMRTA1Q5VZB9 504 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 GRAMD4Q6IC98 578 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 NUDT18Q6ZVK8 323 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 CHST9Q7L1S5 443 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 CCDC105Q8IYK2 499 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 FBXL6Q8N531 539 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 TERB1Q8NA31 727 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 FLCNQ8NFG4 579 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 FIBINQ8TAL6 211 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 IGSF8Q969P0 613 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 CLDN23Q96B33 292 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 PEBP4Q96S96 227 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 C1QTNF1Q9BXJ1 281 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 LACRTQ9GZZ8 138 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 RETREG1Q9H6L5 497 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 ARHGEF4Q9NR80 690 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 STIM2Q9P246 746 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 PPARGC1AQ9UBK2 798 aaKnown RBP12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 PCSK1NQ9UHG2 260 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 CLEC4EQ9ULY5 219 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 TFR2Q9UP52 801 aa12.28□□□□□ -0.44
PDLIM5-208ENST00000504489 SIT1Q9Y3P8 196 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms