RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 PCDHA10Q9Y5I2 948 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 C1orf232A0A0U1RR37 186 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 M0QYV0 167 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 ERBB2P04626 1255 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 GJB1P08034 283 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 NR3C2P08235 984 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 OCM2P0CE71 109 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 OCMP0CE72 109 aaPredicted RBP7.81□□□□□ -1.16
NEDD9-208ENST00000504387 TSPAN8P19075 237 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 CD247P20963 164 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 HMGCS2P54868 508 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 NR1H2P55055 460 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 PRKCEQ02156 737 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 MYBPC2Q14324 1141 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 PCLAFQ15004 111 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 OGFRL1Q5TC84 451 aaPredicted RBP7.81□□□□□ -1.16
NEDD9-208ENST00000504387 BNC2Q6ZN30 1099 aaPredicted RBP7.81□□□□□ -1.16
NEDD9-208ENST00000504387 SAMD7Q7Z3H4 446 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 MCF2L2Q86YR7 1114 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 LRRC71Q8N4P6 559 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 PQLC3Q8N755 202 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 TDRD5Q8NAT2 981 aaKnown RBP7.81□□□□□ -1.16
NEDD9-208ENST00000504387 SMYD1Q8NB12 490 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 CCNYQ8ND76 341 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 TMC2Q8TDI7 906 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 NLRP4Q96MN2 994 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 SORT1Q99523 831 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 PIF1Q9H611 641 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 PTPRHQ9HD43 1115 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 XPNPEP3Q9NQH7 507 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 DDX56Q9NY93 547 aaKnown RBP7.81□□□□□ -1.16
NEDD9-208ENST00000504387 BARX2Q9UMQ3 279 aaPredicted RBP7.81□□□□□ -1.16
NEDD9-208ENST00000504387 TBC1D30Q9Y2I9 924 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 RNF11Q9Y3C5 154 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 SPDYE2BA6NHP3 402 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 E7ESA3 106 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 AKAP10O43572 662 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 SNNO75324 88 aaPredicted RBP7.81□□□□□ -1.16
NEDD9-208ENST00000504387 ASNSP08243 561 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 KRT7P08729 469 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 SPDYE6P0CI01 402 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 CPA3P15088 417 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 NFKBIAP25963 317 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 PIK3R1P27986 724 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 TMED10P49755 219 aaKnown RBP7.81□□□□□ -1.16
NEDD9-208ENST00000504387 ABCE1P61221 599 aaKnown RBP7.81□□□□□ -1.16
NEDD9-208ENST00000504387 TSPY1Q01534 308 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 ADGRE1Q14246 886 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 PLCL1Q15111 1095 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 CCDC142Q17RM4 750 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 FGD3Q5JSP0 725 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 TMEM214Q6NUQ4 689 aaKnown RBP7.81□□□□□ -1.16
NEDD9-208ENST00000504387 PGM2L1Q6PCE3 622 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 GK5Q6ZS86 529 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 ENOSF1Q7L5Y1 443 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 FAM160B2Q86V87 743 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 IFNEQ86WN2 208 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 RNF135Q8IUD6 432 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 CYGBQ8WWM9 190 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 SLC45A3Q96JT2 553 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 AGAP2Q99490 1192 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 KLC2Q9H0B6 622 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 RBM38Q9H0Z9 239 aaKnown RBP7.81□□□□□ -1.16
NEDD9-208ENST00000504387 NRDE2Q9H7Z3 1164 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 TCF7L2Q9NQB0 619 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 ZDHHC7Q9NXF8 308 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 UBP1Q9NZI7 540 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 NDUFA13Q9P0J0 144 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 TUBGCP4Q9UGJ1 667 aa7.81□□□□□ -1.16
NEDD9-208ENST00000504387 ATP6AP2A0A1C7CYW4 349 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 ZNF839A8K0R7 811 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 INO80B-WBP1J3KQ70 363 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 K7EPI3 171 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 APOC4-APOC2K7ER74 178 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 PSMD12O00232 456 aaPredicted RBP7.8□□□□□ -1.16
NEDD9-208ENST00000504387 LSM1O15116 133 aaKnown RBP7.8□□□□□ -1.16
NEDD9-208ENST00000504387 EXTL3O43909 919 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 PRPSAP2O60256 369 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 PLIN3O60664 434 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 ATP6AP2O75787 350 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 APOC2P02655 101 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 TPH1P17752 444 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 EEF1B2P24534 225 aaKnown RBP7.8□□□□□ -1.16
NEDD9-208ENST00000504387 NAGLUP54802 743 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 TRAF2Q12933 501 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 KCNJ11Q14654 390 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 PGM5Q15124 567 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 DRICH1Q6PGQ1 229 aaPredicted RBP7.8□□□□□ -1.16
NEDD9-208ENST00000504387 KDELC2Q7Z4H8 507 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 ZNF677Q86XU0 584 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 MARVELD2Q8N4S9 558 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 KYQ8NBH2 561 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 ACVR1CQ8NER5 493 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 PPP1R13LQ8WUF5 828 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 RXFP2Q8WXD0 754 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 HEXIM2Q96MH2 286 aaKnown RBP7.8□□□□□ -1.16
NEDD9-208ENST00000504387 LGMNQ99538 433 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 LPIN3Q9BQK8 851 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 INO80BQ9C086 356 aaPredicted RBP7.8□□□□□ -1.16
NEDD9-208ENST00000504387 PDGFDQ9GZP0 370 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms